RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 JMYQ8N9B5 988 aa11.02□□□□□ -0.65
LDHA-223ENST00000545215 AMOTL2Q9Y2J4 779 aa11.02□□□□□ -0.65
LDHA-223ENST00000545215 A0A0G2JS52 829 aa11.01□□□□□ -0.65
LDHA-223ENST00000545215 TRIM37O94972 964 aa11.01□□□□□ -0.65
LDHA-223ENST00000545215 MYT1Q01538 1121 aa11.01□□□□□ -0.65
LDHA-223ENST00000545215 CCDC9Q9Y3X0 531 aaKnown RBP11.01□□□□□ -0.65
LDHA-223ENST00000545215 DLC1Q96QB1 1528 aa11.01□□□□□ -0.65
LDHA-223ENST00000545215 RPRD2Q5VT52 1461 aaKnown RBP11□□□□□ -0.65
LDHA-223ENST00000545215 MTUS2Q5JR59 1369 aa11□□□□□ -0.65
LDHA-223ENST00000545215 CEP152O94986 1710 aa11□□□□□ -0.65
LDHA-223ENST00000545215 TRPM2O94759 1503 aa10.99□□□□□ -0.65
LDHA-223ENST00000545215 HDGFP51858 240 aaKnown RBP10.99□□□□□ -0.65
LDHA-223ENST00000545215 GPBP1L1Q9HC44 474 aaPredicted RBP10.99□□□□□ -0.65
LDHA-223ENST00000545215 C1orf167Q5SNV9 1468 aa10.99□□□□□ -0.65
LDHA-223ENST00000545215 ZFYVE9O95405 1425 aa10.99□□□□□ -0.65
LDHA-223ENST00000545215 FAM98CQ17RN3 349 aaKnown RBP10.98□□□□□ -0.65
LDHA-223ENST00000545215 ORAI2Q96SN7 254 aa10.98□□□□□ -0.65
LDHA-223ENST00000545215 ADAMTS13Q76LX8 1427 aa10.98□□□□□ -0.65
LDHA-223ENST00000545215 ZBTB7AO95365 584 aa10.97□□□□□ -0.65
LDHA-223ENST00000545215 CASZ1Q86V15 1759 aa10.97□□□□□ -0.65
LDHA-223ENST00000545215 ADGRL3Q9HAR2 1447 aa10.97□□□□□ -0.65
LDHA-223ENST00000545215 ATP10DQ9P241 1426 aa10.97□□□□□ -0.65
LDHA-223ENST00000545215 CCNB3Q8WWL7 1395 aa10.97□□□□□ -0.65
LDHA-223ENST00000545215 CCDC18Q5T9S5 1454 aa10.96□□□□□ -0.65
LDHA-223ENST00000545215 TMEM131LA2VDJ0 1609 aa10.96□□□□□ -0.65
LDHA-223ENST00000545215 FAM196AQ6ZSG2 479 aa10.96□□□□□ -0.65
LDHA-223ENST00000545215 PTPRUQ92729 1446 aa10.96□□□□□ -0.65
LDHA-223ENST00000545215 PDGFDQ9GZP0 370 aaPredicted RBP10.96□□□□□ -0.65
LDHA-223ENST00000545215 NOS1P29475 1434 aa10.95□□□□□ -0.66
LDHA-223ENST00000545215 TNS2Q63HR2 1409 aa10.95□□□□□ -0.66
LDHA-223ENST00000545215 ZNF467Q7Z7K2 595 aaPredicted RBP10.95□□□□□ -0.66
LDHA-223ENST00000545215 KLRG1Q96E93 195 aa10.95□□□□□ -0.66
LDHA-223ENST00000545215 EHBP1L1Q8N3D4 1523 aa10.95□□□□□ -0.66
LDHA-223ENST00000545215 MAP3K5Q99683 1374 aa10.95□□□□□ -0.66
LDHA-223ENST00000545215 FAM161AQ3B820 660 aa10.94□□□□□ -0.66
LDHA-223ENST00000545215 RSPH4AQ5TD94 716 aa10.94□□□□□ -0.66
LDHA-223ENST00000545215 RIMS2Q9UQ26 1411 aa10.93□□□□□ -0.66
LDHA-223ENST00000545215 CCDC141Q6ZP82 1450 aa10.92□□□□□ -0.66
LDHA-223ENST00000545215 PDAP1Q13442 181 aaKnown RBP10.91□□□□□ -0.66
LDHA-223ENST00000545215 SLC52A1Q9NWF4 448 aa10.91□□□□□ -0.66
LDHA-223ENST00000545215 NWD2Q9ULI1 1742 aa10.91□□□□□ -0.66
LDHA-223ENST00000545215 EIF2AK4Q9P2K8 1649 aaKnown RBP10.91□□□□□ -0.66
LDHA-223ENST00000545215 TSPYL2Q9H2G4 693 aaPredicted RBP10.9□□□□□ -0.66
LDHA-223ENST00000545215 NPHP3Q7Z494 1330 aa10.9□□□□□ -0.66
LDHA-223ENST00000545215 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.89□□□□□ -0.67
LDHA-223ENST00000545215 PXDNQ92626 1479 aa10.89□□□□□ -0.67
LDHA-223ENST00000545215 USP32Q8NFA0 1604 aa10.89□□□□□ -0.67
LDHA-223ENST00000545215 KIF3CO14782 793 aa10.88□□□□□ -0.67
LDHA-223ENST00000545215 CHADLQ6NUI6 762 aa10.88□□□□□ -0.67
LDHA-223ENST00000545215 KCNV2Q8TDN2 545 aa10.88□□□□□ -0.67
LDHA-223ENST00000545215 ARXQ96QS3 562 aa10.88□□□□□ -0.67
LDHA-223ENST00000545215 ANO8Q9HCE9 1232 aaPredicted RBP10.88□□□□□ -0.67
LDHA-223ENST00000545215 PTPN23Q9H3S7 1636 aa10.88□□□□□ -0.67
LDHA-223ENST00000545215 CROCC2H7BZ55 1655 aa10.88□□□□□ -0.67
LDHA-223ENST00000545215 FARP1Q9Y4F1 1045 aaPredicted RBP10.87□□□□□ -0.67
LDHA-223ENST00000545215 PLCH1Q4KWH8 1693 aa10.87□□□□□ -0.67
LDHA-223ENST00000545215 XRN1Q8IZH2 1706 aaKnown RBP10.87□□□□□ -0.67
LDHA-223ENST00000545215 ABCC5O15440 1437 aa10.87□□□□□ -0.67
LDHA-223ENST00000545215 TSPY4P0CV99 314 aa10.86□□□□□ -0.67
LDHA-223ENST00000545215 TSPY10P0CW01 314 aa10.86□□□□□ -0.67
LDHA-223ENST00000545215 MTFR1LQ9H019 292 aa10.86□□□□□ -0.67
LDHA-223ENST00000545215 PCDHB8Q9UN66 801 aa10.86□□□□□ -0.67
LDHA-223ENST00000545215 PCDHB13Q9Y5F0 798 aa10.86□□□□□ -0.67
LDHA-223ENST00000545215 FYCO1Q9BQS8 1478 aa10.86□□□□□ -0.67
LDHA-223ENST00000545215 NEXMIFQ5QGS0 1516 aa10.86□□□□□ -0.67
LDHA-223ENST00000545215 THSD7AQ9UPZ6 1657 aa10.86□□□□□ -0.67
LDHA-223ENST00000545215 ADGRL2O95490 1459 aa10.85□□□□□ -0.67
LDHA-223ENST00000545215 GRIN3BO60391 1043 aa10.85□□□□□ -0.67
LDHA-223ENST00000545215 PELP1Q8IZL8 1130 aaKnown RBP10.85□□□□□ -0.67
LDHA-223ENST00000545215 ZNF526Q8TF50 670 aaPredicted RBP10.85□□□□□ -0.67
LDHA-223ENST00000545215 MFRPQ9BY79 579 aa10.85□□□□□ -0.67
LDHA-223ENST00000545215 WDR70Q9NW82 654 aa10.85□□□□□ -0.67
LDHA-223ENST00000545215 NALCNQ8IZF0 1738 aa10.85□□□□□ -0.67
LDHA-223ENST00000545215 WDR90Q96KV7 1748 aa10.85□□□□□ -0.67
LDHA-223ENST00000545215 CASKIN1Q8WXD9 1431 aa10.85□□□□□ -0.67
LDHA-223ENST00000545215 GOLGB1Q14789 3259 aaKnown RBP10.85□□□□□ -0.67
LDHA-223ENST00000545215 CCDC61Q9Y6R9 512 aa10.84□□□□□ -0.67
LDHA-223ENST00000545215 PCNTO95613 3336 aa10.84□□□□□ -0.67
LDHA-223ENST00000545215 ADCY9O60503 1353 aa10.84□□□□□ -0.67
LDHA-223ENST00000545215 XPCQ01831 940 aaPredicted RBP10.84□□□□□ -0.67
LDHA-223ENST00000545215 ZNF579Q8NAF0 562 aaKnown RBP10.84□□□□□ -0.67
LDHA-223ENST00000545215 FOXO3O43524 673 aa10.83□□□□□ -0.68
LDHA-223ENST00000545215 PSEN1P49768 467 aa10.83□□□□□ -0.68
LDHA-223ENST00000545215 MLLT1Q03111 559 aaPredicted RBP10.83□□□□□ -0.68
LDHA-223ENST00000545215 SPATA31A5Q5VU36 1347 aa10.82□□□□□ -0.68
LDHA-223ENST00000545215 SPATA31A7Q8IWB4 1347 aa10.82□□□□□ -0.68
LDHA-223ENST00000545215 MYO5BQ9ULV0 1848 aa10.82□□□□□ -0.68
LDHA-223ENST00000545215 TOMM70O94826 608 aa10.82□□□□□ -0.68
LDHA-223ENST00000545215 HSPA1AP0DMV8 641 aaKnown RBP10.82□□□□□ -0.68
LDHA-223ENST00000545215 HSPA1BP0DMV9 641 aaKnown RBP10.82□□□□□ -0.68
LDHA-223ENST00000545215 HTRA3P83110 453 aa10.82□□□□□ -0.68
LDHA-223ENST00000545215 SPATA31A3Q5VYP0 1347 aa10.82□□□□□ -0.68
LDHA-223ENST00000545215 PLSCR1O15162 318 aa10.81□□□□□ -0.68
LDHA-223ENST00000545215 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.81□□□□□ -0.68
LDHA-223ENST00000545215 YBX3P16989 372 aaKnown RBP eCLIP10.8□□□□□ -0.681e-29■■□□□ 11.8
LDHA-223ENST00000545215 ESCO1Q5FWF5 840 aa10.8□□□□□ -0.68
LDHA-223ENST00000545215 NRAPQ86VF7 1730 aa10.79□□□□□ -0.68
LDHA-223ENST00000545215 LRPPRCP42704 1394 aaKnown RBP10.79□□□□□ -0.68
LDHA-223ENST00000545215 LMOD2Q6P5Q4 547 aa10.79□□□□□ -0.68
LDHA-223ENST00000545215 TIMELESSQ9UNS1 1208 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms