RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 IL16Q14005 1332 aa22.88■■□□□ 1.25
SCARB1-208ENST00000544327 ZMYM3Q14202 1370 aa22.87■■□□□ 1.25
SCARB1-208ENST00000544327 FAM135BQ49AJ0 1406 aa22.87■■□□□ 1.25
SCARB1-208ENST00000544327 TMPOP42166 694 aaKnown RBP22.87■■□□□ 1.25
SCARB1-208ENST00000544327 FAM161AQ3B820 660 aa22.87■■□□□ 1.25
SCARB1-208ENST00000544327 PNNQ9H307 717 aaKnown RBP22.87■■□□□ 1.25
SCARB1-208ENST00000544327 CPSF1Q10570 1443 aaKnown RBP22.87■■□□□ 1.25
SCARB1-208ENST00000544327 PANK1Q8TE04 598 aa22.86■■□□□ 1.25
SCARB1-208ENST00000544327 CPS1P31327 1500 aa22.86■■□□□ 1.25
SCARB1-208ENST00000544327 DIAPH1O60610 1272 aaKnown RBP22.85■■□□□ 1.25
SCARB1-208ENST00000544327 WAPLQ7Z5K2 1190 aa22.85■■□□□ 1.25
SCARB1-208ENST00000544327 NPM2Q86SE8 214 aaKnown RBP22.85■■□□□ 1.25
SCARB1-208ENST00000544327 EDC4Q6P2E9 1401 aaKnown RBP22.84■■□□□ 1.25
SCARB1-208ENST00000544327 U2SURPO15042 1029 aaKnown RBP22.84■■□□□ 1.25
SCARB1-208ENST00000544327 TRIM35Q9UPQ4 493 aa22.84■■□□□ 1.25
SCARB1-208ENST00000544327 COG6Q9Y2V7 657 aa22.84■■□□□ 1.25
SCARB1-208ENST00000544327 MAPK8IP3Q9UPT6 1336 aa22.84■■□□□ 1.25
SCARB1-208ENST00000544327 IGHDP01880 384 aa22.83■■□□□ 1.25
SCARB1-208ENST00000544327 C8orf34Q49A92 452 aa22.83■■□□□ 1.25
SCARB1-208ENST00000544327 MLECQ14165 292 aa22.82■■□□□ 1.24
SCARB1-208ENST00000544327 DDRGK1Q96HY6 314 aa22.82■■□□□ 1.24
SCARB1-208ENST00000544327 VIRMAQ69YN4 1812 aaKnown RBP22.82■■□□□ 1.24
SCARB1-208ENST00000544327 METP08581 1390 aa22.82■■□□□ 1.24
SCARB1-208ENST00000544327 HDGFP51858 240 aaKnown RBP22.82■■□□□ 1.24
SCARB1-208ENST00000544327 MON2Q7Z3U7 1717 aa22.81■■□□□ 1.24
SCARB1-208ENST00000544327 UBR1Q8IWV7 1749 aa22.81■■□□□ 1.24
SCARB1-208ENST00000544327 WASLO00401 505 aaPredicted RBP22.81■■□□□ 1.24
SCARB1-208ENST00000544327 FRAT1Q92837 279 aaPredicted RBP22.81■■□□□ 1.24
SCARB1-208ENST00000544327 TNRQ92752 1358 aa22.81■■□□□ 1.24
SCARB1-208ENST00000544327 LRRC7Q96NW7 1537 aa22.8■■□□□ 1.24
SCARB1-208ENST00000544327 PMFBP1Q8TBY8 1022 aa22.8■■□□□ 1.24
SCARB1-208ENST00000544327 PPIP5K1Q6PFW1 1433 aa22.79■■□□□ 1.24
SCARB1-208ENST00000544327 FCHSD2O94868 740 aa22.79■■□□□ 1.24
SCARB1-208ENST00000544327 ESF1Q9H501 851 aaKnown RBP22.79■■□□□ 1.24
SCARB1-208ENST00000544327 AKAP12Q02952 1782 aa22.79■■□□□ 1.24
SCARB1-208ENST00000544327 RLBP1P12271 317 aa22.78■■□□□ 1.24
SCARB1-208ENST00000544327 AATKQ6ZMQ8 1374 aa22.77■■□□□ 1.24
SCARB1-208ENST00000544327 MAP2P11137 1827 aaKnown RBP22.77■■□□□ 1.24
SCARB1-208ENST00000544327 POLKQ9UBT6 870 aa22.77■■□□□ 1.24
SCARB1-208ENST00000544327 CDK12Q9NYV4 1490 aaPredicted RBP22.77■■□□□ 1.24
SCARB1-208ENST00000544327 TMEM2Q9UHN6 1383 aa22.76■■□□□ 1.23
SCARB1-208ENST00000544327 ZKSCAN2Q63HK3 967 aa22.75■■□□□ 1.23
SCARB1-208ENST00000544327 RGS3P49796 1198 aa22.75■■□□□ 1.23
SCARB1-208ENST00000544327 C3P01024 1663 aa22.74■■□□□ 1.23
SCARB1-208ENST00000544327 ITSN1Q15811 1721 aa22.74■■□□□ 1.23
SCARB1-208ENST00000544327 RIPK4P57078 832 aa22.74■■□□□ 1.23
SCARB1-208ENST00000544327 RSPH6AQ9H0K4 717 aa22.74■■□□□ 1.23
SCARB1-208ENST00000544327 EXOSC9Q06265 439 aaKnown RBP22.73■■□□□ 1.23
SCARB1-208ENST00000544327 MVPQ14764 893 aaKnown RBP22.73■■□□□ 1.23
SCARB1-208ENST00000544327 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.73■■□□□ 1.232e-8■□□□□ 8.6
SCARB1-208ENST00000544327 TSR2Q969E8 191 aaKnown RBP22.73■■□□□ 1.23
SCARB1-208ENST00000544327 BCL2L13Q9BXK5 485 aa22.73■■□□□ 1.23
SCARB1-208ENST00000544327 TNNQ9UQP3 1299 aa22.73■■□□□ 1.23
SCARB1-208ENST00000544327 PCDHB15Q9Y5E8 787 aa22.72■■□□□ 1.23
SCARB1-208ENST00000544327 NUDT16Q96DE0 195 aaKnown RBP22.71■■□□□ 1.23
SCARB1-208ENST00000544327 ADAMTS13Q76LX8 1427 aa22.71■■□□□ 1.23
SCARB1-208ENST00000544327 TXNDC2Q86VQ3 553 aa22.71■■□□□ 1.23
SCARB1-208ENST00000544327 DZIP1LQ8IYY4 767 aaKnown RBP22.71■■□□□ 1.23
SCARB1-208ENST00000544327 CCDC61Q9Y6R9 512 aa22.71■■□□□ 1.23
SCARB1-208ENST00000544327 TOPAZ1Q8N9V7 1692 aa22.69■■□□□ 1.22
SCARB1-208ENST00000544327 RWDD1Q9H446 243 aaPredicted RBP22.68■■□□□ 1.22
SCARB1-208ENST00000544327 SMC4Q9NTJ3 1288 aa22.68■■□□□ 1.22
SCARB1-208ENST00000544327 PLEKHG1Q9ULL1 1385 aa22.68■■□□□ 1.22
SCARB1-208ENST00000544327 SSH1Q8WYL5 1049 aa22.68■■□□□ 1.22
SCARB1-208ENST00000544327 PRKAR2BP31323 418 aa22.67■■□□□ 1.22
SCARB1-208ENST00000544327 IL13P35225 146 aa22.67■■□□□ 1.22
SCARB1-208ENST00000544327 NRKQ7Z2Y5 1582 aa22.67■■□□□ 1.22
SCARB1-208ENST00000544327 NFE2L2Q16236 605 aa22.66■■□□□ 1.22
SCARB1-208ENST00000544327 ALDH1L2Q3SY69 923 aa22.66■■□□□ 1.22
SCARB1-208ENST00000544327 NME9Q86XW9 330 aa22.66■■□□□ 1.22
SCARB1-208ENST00000544327 ZNF428Q96B54 188 aa22.66■■□□□ 1.22
SCARB1-208ENST00000544327 ZNF692Q9BU19 519 aaPredicted RBP22.66■■□□□ 1.22
SCARB1-208ENST00000544327 NEFMP07197 916 aa22.66■■□□□ 1.22
SCARB1-208ENST00000544327 NBR1Q14596 966 aa22.66■■□□□ 1.22
SCARB1-208ENST00000544327 FTSJ3Q8IY81 847 aaKnown RBP22.66■■□□□ 1.22
SCARB1-208ENST00000544327 BRPF1P55201 1214 aaPredicted RBP22.65■■□□□ 1.22
SCARB1-208ENST00000544327 ROBO2Q9HCK4 1378 aa22.65■■□□□ 1.22
SCARB1-208ENST00000544327 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.64■■□□□ 1.22
SCARB1-208ENST00000544327 TRIM27P14373 513 aa22.64■■□□□ 1.22
SCARB1-208ENST00000544327 ATF7IPQ6VMQ6 1270 aa22.64■■□□□ 1.22
SCARB1-208ENST00000544327 KIF16BQ96L93 1317 aa22.64■■□□□ 1.22
SCARB1-208ENST00000544327 PPM1GO15355 546 aaPredicted RBP22.64■■□□□ 1.21
SCARB1-208ENST00000544327 CALD1Q05682 793 aaKnown RBP22.64■■□□□ 1.21
SCARB1-208ENST00000544327 COG3Q96JB2 828 aa22.64■■□□□ 1.21
SCARB1-208ENST00000544327 DDX19BQ9UMR2 479 aa22.63■■□□□ 1.21
SCARB1-208ENST00000544327 EMILIN1Q9Y6C2 1016 aa22.63■■□□□ 1.21
SCARB1-208ENST00000544327 PRR36Q9H6K5 1346 aa22.63■■□□□ 1.21
SCARB1-208ENST00000544327 FBLN1P23142 703 aa22.62■■□□□ 1.21
SCARB1-208ENST00000544327 IPO8O15397 1037 aaKnown RBP22.61■■□□□ 1.21
SCARB1-208ENST00000544327 HDAC1Q13547 482 aaPredicted RBP22.61■■□□□ 1.21
SCARB1-208ENST00000544327 USP35Q9P2H5 1018 aa22.61■■□□□ 1.21
SCARB1-208ENST00000544327 PDZRN3Q9UPQ7 1066 aa22.61■■□□□ 1.21
SCARB1-208ENST00000544327 RTL5Q5HYW3 569 aaPredicted RBP22.6■■□□□ 1.21
SCARB1-208ENST00000544327 NOB1Q9ULX3 412 aaKnown RBP22.6■■□□□ 1.21
SCARB1-208ENST00000544327 PHACTR3Q96KR7 559 aa22.59■■□□□ 1.21
SCARB1-208ENST00000544327 SLIT1O75093 1534 aa22.59■■□□□ 1.21
SCARB1-208ENST00000544327 ZRANB1Q9UGI0 708 aa22.59■■□□□ 1.21
SCARB1-208ENST00000544327 NALCNQ8IZF0 1738 aa22.59■■□□□ 1.21
SCARB1-208ENST00000544327 ARHGAP23Q9P227 1491 aa22.59■■□□□ 1.21
SCARB1-208ENST00000544327 USP19O94966 1318 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms