RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 BCL2L13Q9BXK5 485 aa22.65■■□□□ 1.22
CCT4-204ENST00000544079 TRPM2O94759 1503 aa22.65■■□□□ 1.22
CCT4-204ENST00000544079 CARD14Q9BXL6 1004 aa22.64■■□□□ 1.22
CCT4-204ENST00000544079 NEURL4Q96JN8 1562 aa22.64■■□□□ 1.21
CCT4-204ENST00000544079 NUCB2P80303 420 aa22.64■■□□□ 1.21
CCT4-204ENST00000544079 CCDC39Q9UFE4 941 aa22.64■■□□□ 1.21
CCT4-204ENST00000544079 ADGRB2O60241 1585 aa22.63■■□□□ 1.21
CCT4-204ENST00000544079 ZSCAN23Q3MJ62 389 aa22.63■■□□□ 1.21
CCT4-204ENST00000544079 SYCP2Q9BX26 1530 aa22.62■■□□□ 1.21
CCT4-204ENST00000544079 NCLP19338 710 aaKnown RBP22.61■■□□□ 1.21
CCT4-204ENST00000544079 USP32Q8NFA0 1604 aa22.61■■□□□ 1.21
CCT4-204ENST00000544079 XPCQ01831 940 aaPredicted RBP22.61■■□□□ 1.21
CCT4-204ENST00000544079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.61■■□□□ 1.216e-6■■□□□ 13.7
CCT4-204ENST00000544079 MYO3AQ8NEV4 1616 aa22.61■■□□□ 1.21
CCT4-204ENST00000544079 SBNO2Q9Y2G9 1366 aa22.6■■□□□ 1.21
CCT4-204ENST00000544079 RBSNQ9H1K0 784 aa22.6■■□□□ 1.21
CCT4-204ENST00000544079 ZNF518AQ6AHZ1 1483 aa22.59■■□□□ 1.21
CCT4-204ENST00000544079 GAS2L2Q8NHY3 880 aa22.59■■□□□ 1.21
CCT4-204ENST00000544079 ZBTB40Q9NUA8 1239 aa22.59■■□□□ 1.21
CCT4-204ENST00000544079 CYP2E1P05181 493 aaPredicted RBP22.59■■□□□ 1.21
CCT4-204ENST00000544079 TRIM27P14373 513 aa22.59■■□□□ 1.21
CCT4-204ENST00000544079 ATF7IPQ6VMQ6 1270 aa22.59■■□□□ 1.21
CCT4-204ENST00000544079 LMBRD1Q9NUN5 540 aa22.59■■□□□ 1.21
CCT4-204ENST00000544079 RRP7AQ9Y3A4 280 aaKnown RBP22.59■■□□□ 1.21
CCT4-204ENST00000544079 CD2BP2O95400 341 aaKnown RBP22.58■■□□□ 1.21
CCT4-204ENST00000544079 NEUROD2Q15784 382 aa22.58■■□□□ 1.21
CCT4-204ENST00000544079 CHD1LQ86WJ1 897 aa22.58■■□□□ 1.21
CCT4-204ENST00000544079 CLTCL1P53675 1640 aa22.57■■□□□ 1.2
CCT4-204ENST00000544079 CFAP44Q96MT7 982 aa22.56■■□□□ 1.2
CCT4-204ENST00000544079 PTPRTO14522 1441 aa22.56■■□□□ 1.2
CCT4-204ENST00000544079 CAVIN1Q6NZI2 390 aaKnown RBP22.56■■□□□ 1.2
CCT4-204ENST00000544079 ITPRIPQ8IWB1 547 aa22.56■■□□□ 1.2
CCT4-204ENST00000544079 GTPBP4Q9BZE4 634 aaKnown RBP22.55■■□□□ 1.2
CCT4-204ENST00000544079 SMC4Q9NTJ3 1288 aa22.55■■□□□ 1.2
CCT4-204ENST00000544079 NOS1P29475 1434 aa22.55■■□□□ 1.2
CCT4-204ENST00000544079 ABCC11Q96J66 1382 aa22.54■■□□□ 1.2
CCT4-204ENST00000544079 CWC22Q9HCG8 908 aaKnown RBP22.54■■□□□ 1.2
CCT4-204ENST00000544079 ZSCAN20P17040 1043 aaPredicted RBP22.54■■□□□ 1.2
CCT4-204ENST00000544079 MORC1Q86VD1 984 aa22.54■■□□□ 1.2
CCT4-204ENST00000544079 MYRIPQ8NFW9 859 aa22.54■■□□□ 1.2
CCT4-204ENST00000544079 CFAP53Q96M91 514 aa22.54■■□□□ 1.2
CCT4-204ENST00000544079 RABEP1Q15276 862 aa22.53■■□□□ 1.2
CCT4-204ENST00000544079 MCTP1Q6DN14 999 aa22.53■■□□□ 1.2
CCT4-204ENST00000544079 LRSAM1Q6UWE0 723 aa22.53■■□□□ 1.2
CCT4-204ENST00000544079 PRIM1P49642 420 aaKnown RBP22.52■■□□□ 1.2
CCT4-204ENST00000544079 PRIMPOLQ96LW4 560 aa22.52■■□□□ 1.2
CCT4-204ENST00000544079 KIF20AO95235 890 aa22.52■■□□□ 1.2
CCT4-204ENST00000544079 TNNT2P45379 298 aaPredicted RBP22.52■■□□□ 1.2
CCT4-204ENST00000544079 GCC1Q96CN9 775 aa22.52■■□□□ 1.2
CCT4-204ENST00000544079 FOXD4L1Q9NU39 408 aa22.52■■□□□ 1.2
CCT4-204ENST00000544079 YEATS2Q9ULM3 1422 aa22.51■■□□□ 1.19
CCT4-204ENST00000544079 IPO8O15397 1037 aaKnown RBP22.51■■□□□ 1.19
CCT4-204ENST00000544079 FGD1P98174 961 aa22.51■■□□□ 1.19
CCT4-204ENST00000544079 MYOM2P54296 1465 aa22.51■■□□□ 1.19
CCT4-204ENST00000544079 IL16Q14005 1332 aa22.51■■□□□ 1.19
CCT4-204ENST00000544079 GTF2F1P35269 517 aaKnown RBP eCLIP22.5■■□□□ 1.19
CCT4-204ENST00000544079 HMGN5P82970 282 aaKnown RBP22.5■■□□□ 1.19
CCT4-204ENST00000544079 TBC1D9Q6ZT07 1266 aa22.5■■□□□ 1.19
CCT4-204ENST00000544079 LNPKQ9C0E8 428 aa22.5■■□□□ 1.19
CCT4-204ENST00000544079 CHMP4BQ9H444 224 aaKnown RBP22.5■■□□□ 1.19
CCT4-204ENST00000544079 NSD3Q9BZ95 1437 aa22.49■■□□□ 1.19
CCT4-204ENST00000544079 SSH1Q8WYL5 1049 aa22.49■■□□□ 1.19
CCT4-204ENST00000544079 MED14O60244 1454 aa22.49■■□□□ 1.19
CCT4-204ENST00000544079 MAP3K4Q9Y6R4 1608 aa22.49■■□□□ 1.19
CCT4-204ENST00000544079 KIAA2012Q0VF49 1180 aa22.48■■□□□ 1.19
CCT4-204ENST00000544079 TMEM57Q8N5G2 664 aa22.48■■□□□ 1.19
CCT4-204ENST00000544079 ARHGAP5Q13017 1502 aa22.47■■□□□ 1.19
CCT4-204ENST00000544079 A0A0U1RQG5 324 aaPredicted RBP22.47■■□□□ 1.19
CCT4-204ENST00000544079 JPH4Q96JJ6 628 aa22.47■■□□□ 1.19
CCT4-204ENST00000544079 PPRC1Q5VV67 1664 aaKnown RBP22.46■■□□□ 1.19
CCT4-204ENST00000544079 CDC45O75419 566 aa22.46■■□□□ 1.19
CCT4-204ENST00000544079 ABCA6Q8N139 1617 aa22.46■■□□□ 1.19
CCT4-204ENST00000544079 LETM1O95202 739 aaPredicted RBP22.46■■□□□ 1.19
CCT4-204ENST00000544079 EXOSC9Q06265 439 aaKnown RBP22.46■■□□□ 1.19
CCT4-204ENST00000544079 RBM42Q9BTD8 480 aaKnown RBP22.46■■□□□ 1.19
CCT4-204ENST00000544079 NOB1Q9ULX3 412 aaKnown RBP22.46■■□□□ 1.19
CCT4-204ENST00000544079 ZHX1Q9UKY1 873 aaPredicted RBP22.45■■□□□ 1.18
CCT4-204ENST00000544079 INO80Q9ULG1 1556 aaPredicted RBP22.45■■□□□ 1.18
CCT4-204ENST00000544079 GPT2Q8TD30 523 aa22.45■■□□□ 1.18
CCT4-204ENST00000544079 MBD3O95983 291 aa22.44■■□□□ 1.18
CCT4-204ENST00000544079 ALDH1L2Q3SY69 923 aa22.44■■□□□ 1.18
CCT4-204ENST00000544079 AK9Q5TCS8 1911 aa22.43■■□□□ 1.18
CCT4-204ENST00000544079 NSD2O96028 1365 aa22.43■■□□□ 1.18
CCT4-204ENST00000544079 BRPF1P55201 1214 aaPredicted RBP22.43■■□□□ 1.18
CCT4-204ENST00000544079 PRDM10Q9NQV6 1147 aa22.43■■□□□ 1.18
CCT4-204ENST00000544079 ERCC6L2Q5T890 1561 aa22.42■■□□□ 1.18
CCT4-204ENST00000544079 MTHFSP49914 203 aa22.41■■□□□ 1.18
CCT4-204ENST00000544079 TET3O43151 1660 aa22.41■■□□□ 1.18
CCT4-204ENST00000544079 TRAPPC8Q9Y2L5 1435 aa22.4■■□□□ 1.18
CCT4-204ENST00000544079 ZC3H13Q5T200 1668 aaKnown RBP22.4■■□□□ 1.18
CCT4-204ENST00000544079 PRPF40AO75400 957 aaKnown RBP22.4■■□□□ 1.18
CCT4-204ENST00000544079 ZNF428Q96B54 188 aa22.4■■□□□ 1.18
CCT4-204ENST00000544079 TSR2Q969E8 191 aaKnown RBP22.4■■□□□ 1.18
CCT4-204ENST00000544079 PPIP5K1Q6PFW1 1433 aa22.39■■□□□ 1.18
CCT4-204ENST00000544079 SETBP1Q9Y6X0 1596 aa22.39■■□□□ 1.18
CCT4-204ENST00000544079 ANKRD45Q5TZF3 282 aa22.39■■□□□ 1.17
CCT4-204ENST00000544079 TMEM63CQ9P1W3 806 aa22.39■■□□□ 1.17
CCT4-204ENST00000544079 PIBF1Q8WXW3 757 aa22.38■■□□□ 1.17
CCT4-204ENST00000544079 PIK3R4Q99570 1358 aa22.38■■□□□ 1.17
CCT4-204ENST00000544079 DEPDC5O75140 1603 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms