RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 ATP10AO60312 1499 aa15.93■□□□□ 0.14
TUBGCP2-210ENST00000543663 GNL2Q13823 731 aaKnown RBP15.93■□□□□ 0.14
TUBGCP2-210ENST00000543663 SYAP1Q96A49 352 aaPredicted RBP15.93■□□□□ 0.14
TUBGCP2-210ENST00000543663 CDC42BPBQ9Y5S2 1711 aa15.93■□□□□ 0.14
TUBGCP2-210ENST00000543663 CSB-PGBD3P0DP91 1061 aa15.93■□□□□ 0.14
TUBGCP2-210ENST00000543663 UNC13BO14795 1591 aa15.92■□□□□ 0.14
TUBGCP2-210ENST00000543663 WWC1Q8IX03 1113 aa15.92■□□□□ 0.14
TUBGCP2-210ENST00000543663 CFAP65Q6ZU64 1925 aaKnown RBP15.92■□□□□ 0.14
TUBGCP2-210ENST00000543663 CLASP1Q7Z460 1538 aa15.92■□□□□ 0.14
TUBGCP2-210ENST00000543663 NRDCO43847 1150 aa15.92■□□□□ 0.14
TUBGCP2-210ENST00000543663 TNNQ9UQP3 1299 aa15.92■□□□□ 0.14
TUBGCP2-210ENST00000543663 EID1Q9Y6B2 187 aa15.92■□□□□ 0.14
TUBGCP2-210ENST00000543663 ATP7AQ04656 1500 aa15.91■□□□□ 0.14
TUBGCP2-210ENST00000543663 DCTN1Q14203 1278 aa15.91■□□□□ 0.14
TUBGCP2-210ENST00000543663 NPHP1O15259 732 aa15.91■□□□□ 0.14
TUBGCP2-210ENST00000543663 GOLGA6L6A8MZA4 724 aa15.9■□□□□ 0.14
TUBGCP2-210ENST00000543663 CREBRFQ8IUR6 639 aa15.9■□□□□ 0.14
TUBGCP2-210ENST00000543663 IQGAP3Q86VI3 1631 aa15.9■□□□□ 0.14
TUBGCP2-210ENST00000543663 DUSP27Q5VZP5 1158 aa15.9■□□□□ 0.14
TUBGCP2-210ENST00000543663 FBXW7Q969H0 707 aa15.9■□□□□ 0.14
TUBGCP2-210ENST00000543663 SLFN5Q08AF3 891 aa15.9■□□□□ 0.14
TUBGCP2-210ENST00000543663 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
TUBGCP2-210ENST00000543663 ERCC6L2Q5T890 1561 aa15.89■□□□□ 0.13
TUBGCP2-210ENST00000543663 FAM43AQ8N2R8 423 aa15.89■□□□□ 0.13
TUBGCP2-210ENST00000543663 NCKAP5LQ9HCH0 1330 aa15.89■□□□□ 0.13
TUBGCP2-210ENST00000543663 COL17A1Q9UMD9 1497 aaPredicted RBP15.89■□□□□ 0.13
TUBGCP2-210ENST00000543663 FOSBP53539 338 aa15.89■□□□□ 0.13
TUBGCP2-210ENST00000543663 FKBP5Q13451 457 aaPredicted RBP15.88■□□□□ 0.13
TUBGCP2-210ENST00000543663 PARD3Q8TEW0 1356 aa15.88■□□□□ 0.13
TUBGCP2-210ENST00000543663 CAVIN1Q6NZI2 390 aaKnown RBP15.88■□□□□ 0.13
TUBGCP2-210ENST00000543663 CFAP44Q96MT7 982 aa15.88■□□□□ 0.13
TUBGCP2-210ENST00000543663 SLC52A1Q9NWF4 448 aa15.88■□□□□ 0.13
TUBGCP2-210ENST00000543663 GORABQ5T7V8 394 aa15.87■□□□□ 0.13
TUBGCP2-210ENST00000543663 ZNF592Q92610 1267 aa15.87■□□□□ 0.13
TUBGCP2-210ENST00000543663 R3HCC1Q9Y3T6 440 aaKnown RBP15.87■□□□□ 0.13
TUBGCP2-210ENST00000543663 KIF16BQ96L93 1317 aa15.87■□□□□ 0.13
TUBGCP2-210ENST00000543663 PTMSP20962 102 aa15.86■□□□□ 0.13
TUBGCP2-210ENST00000543663 NME9Q86XW9 330 aa15.86■□□□□ 0.13
TUBGCP2-210ENST00000543663 MIS18AQ9NYP9 233 aa15.86■□□□□ 0.13
TUBGCP2-210ENST00000543663 ZRANB1Q9UGI0 708 aa15.86■□□□□ 0.13
TUBGCP2-210ENST00000543663 EMILIN1Q9Y6C2 1016 aa15.86■□□□□ 0.13
TUBGCP2-210ENST00000543663 RBM10P98175 930 aaKnown RBP15.86■□□□□ 0.13
TUBGCP2-210ENST00000543663 VPS37CA5D8V6 355 aaPredicted RBP15.86■□□□□ 0.13
TUBGCP2-210ENST00000543663 NOB1Q9ULX3 412 aaKnown RBP15.85■□□□□ 0.13
TUBGCP2-210ENST00000543663 LMOD3Q0VAK6 560 aa15.85■□□□□ 0.13
TUBGCP2-210ENST00000543663 ISY1Q9ULR0 285 aaKnown RBP15.85■□□□□ 0.13
TUBGCP2-210ENST00000543663 XPCQ01831 940 aaPredicted RBP15.85■□□□□ 0.13
TUBGCP2-210ENST00000543663 INSRP06213 1382 aa15.84■□□□□ 0.13
TUBGCP2-210ENST00000543663 PLA2R1Q13018 1463 aa15.84■□□□□ 0.13
TUBGCP2-210ENST00000543663 SULT6B1Q6IMI4 303 aa15.84■□□□□ 0.13
TUBGCP2-210ENST00000543663 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.84■□□□□ 0.13
TUBGCP2-210ENST00000543663 NASPP49321 788 aaPredicted RBP15.83■□□□□ 0.13
TUBGCP2-210ENST00000543663 PRPF40AO75400 957 aaKnown RBP15.83■□□□□ 0.12
TUBGCP2-210ENST00000543663 PLEKHH1Q9ULM0 1364 aa15.83■□□□□ 0.12
TUBGCP2-210ENST00000543663 NLRP6P59044 892 aa15.83■□□□□ 0.12
TUBGCP2-210ENST00000543663 SKOR2Q2VWA4 1001 aaPredicted RBP15.83■□□□□ 0.12
TUBGCP2-210ENST00000543663 TOMM22Q9NS69 142 aa15.83■□□□□ 0.12
TUBGCP2-210ENST00000543663 CCDC27Q2M243 656 aa15.82■□□□□ 0.12
TUBGCP2-210ENST00000543663 TRPM2O94759 1503 aa15.82■□□□□ 0.12
TUBGCP2-210ENST00000543663 REC8O95072 547 aa15.82■□□□□ 0.12
TUBGCP2-210ENST00000543663 NEK4P51957 841 aa15.82■□□□□ 0.12
TUBGCP2-210ENST00000543663 CFAP74Q9C0B2 1584 aa15.82■□□□□ 0.12
TUBGCP2-210ENST00000543663 C14orf93Q9H972 538 aaKnown RBP15.82■□□□□ 0.12
TUBGCP2-210ENST00000543663 PTPRTO14522 1441 aa15.81■□□□□ 0.12
TUBGCP2-210ENST00000543663 SF3A1Q15459 793 aaKnown RBP15.81■□□□□ 0.12
TUBGCP2-210ENST00000543663 DIAPH3Q9NSV4 1193 aa15.81■□□□□ 0.12
TUBGCP2-210ENST00000543663 LRPPRCP42704 1394 aaKnown RBP15.81■□□□□ 0.12
TUBGCP2-210ENST00000543663 ZFYVE16Q7Z3T8 1539 aa15.81■□□□□ 0.12
TUBGCP2-210ENST00000543663 MAGI2Q86UL8 1455 aa15.8■□□□□ 0.12
TUBGCP2-210ENST00000543663 MRE11P49959 708 aa15.8■□□□□ 0.12
TUBGCP2-210ENST00000543663 TMPOP42166 694 aaKnown RBP15.8■□□□□ 0.12
TUBGCP2-210ENST00000543663 POLR1AO95602 1720 aaPredicted RBP15.8■□□□□ 0.12
TUBGCP2-210ENST00000543663 API5Q9BZZ5 524 aaKnown RBP15.8■□□□□ 0.12
TUBGCP2-210ENST00000543663 C9orf78Q9NZ63 289 aaPredicted RBP15.79■□□□□ 0.12
TUBGCP2-210ENST00000543663 IGHDP01880 384 aa15.79■□□□□ 0.12
TUBGCP2-210ENST00000543663 FAM83GA6ND36 823 aa15.79■□□□□ 0.12
TUBGCP2-210ENST00000543663 H3BQV1 296 aa15.79■□□□□ 0.12
TUBGCP2-210ENST00000543663 PDE3AQ14432 1141 aa15.79■□□□□ 0.12
TUBGCP2-210ENST00000543663 IFFO2Q5TF58 517 aa15.79■□□□□ 0.12
TUBGCP2-210ENST00000543663 TSPYL4Q9UJ04 414 aa15.78■□□□□ 0.12
TUBGCP2-210ENST00000543663 TAF7LQ5H9L4 462 aa15.78■□□□□ 0.12
TUBGCP2-210ENST00000543663 CCAR2Q8N163 923 aaKnown RBP15.78■□□□□ 0.12
TUBGCP2-210ENST00000543663 SSH1Q8WYL5 1049 aa15.78■□□□□ 0.12
TUBGCP2-210ENST00000543663 TEFQ10587 303 aa15.78■□□□□ 0.12
TUBGCP2-210ENST00000543663 PRDM15P57071 1507 aaPredicted RBP15.78■□□□□ 0.12
TUBGCP2-210ENST00000543663 GPATCH3Q96I76 525 aa15.77■□□□□ 0.12
TUBGCP2-210ENST00000543663 NPC1L1Q9UHC9 1359 aa15.77■□□□□ 0.12
TUBGCP2-210ENST00000543663 AIMP1Q12904 312 aaKnown RBP15.77■□□□□ 0.12
TUBGCP2-210ENST00000543663 NUDT16Q96DE0 195 aaKnown RBP15.77■□□□□ 0.12
TUBGCP2-210ENST00000543663 KDM4AO75164 1064 aa15.77■□□□□ 0.11
TUBGCP2-210ENST00000543663 RARSP54136 660 aaKnown RBP15.77■□□□□ 0.11
TUBGCP2-210ENST00000543663 NEO1Q92859 1461 aa15.77■□□□□ 0.11
TUBGCP2-210ENST00000543663 BECN2A8MW95 431 aa15.77■□□□□ 0.11
TUBGCP2-210ENST00000543663 PPP6R1Q9UPN7 881 aa15.77■□□□□ 0.11
TUBGCP2-210ENST00000543663 MCM4P33991 863 aa15.76■□□□□ 0.11
TUBGCP2-210ENST00000543663 INTS3Q68E01 1043 aaKnown RBP15.76■□□□□ 0.11
TUBGCP2-210ENST00000543663 MCM10Q7L590 875 aa15.76■□□□□ 0.11
TUBGCP2-210ENST00000543663 FAM184AQ8NB25 1140 aa15.76■□□□□ 0.11
TUBGCP2-210ENST00000543663 POGZQ7Z3K3 1410 aa15.76■□□□□ 0.11
TUBGCP2-210ENST00000543663 TET3O43151 1660 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms