RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 NPC1L1Q9UHC9 1359 aa21.98■■□□□ 1.11
TRIM65-204ENST00000543309 EDC4Q6P2E9 1401 aaKnown RBP21.97■■□□□ 1.11
TRIM65-204ENST00000543309 NSD3Q9BZ95 1437 aa21.97■■□□□ 1.11
TRIM65-204ENST00000543309 ESCO1Q5FWF5 840 aa21.97■■□□□ 1.11
TRIM65-204ENST00000543309 NHSL1Q5SYE7 1610 aa21.96■■□□□ 1.11
TRIM65-204ENST00000543309 USP6P35125 1406 aa21.96■■□□□ 1.11
TRIM65-204ENST00000543309 NGDNQ8NEJ9 315 aaKnown RBP21.95■■□□□ 1.1
TRIM65-204ENST00000543309 PMFBP1Q8TBY8 1022 aa21.94■■□□□ 1.1
TRIM65-204ENST00000543309 ORAI2Q96SN7 254 aa21.94■■□□□ 1.1
TRIM65-204ENST00000543309 NSD2O96028 1365 aa21.93■■□□□ 1.1
TRIM65-204ENST00000543309 CGNL1Q0VF96 1302 aa21.93■■□□□ 1.1
TRIM65-204ENST00000543309 SSH2Q76I76 1423 aa21.93■■□□□ 1.1
TRIM65-204ENST00000543309 AMER1Q5JTC6 1135 aaPredicted RBP21.92■■□□□ 1.1
TRIM65-204ENST00000543309 BRINP3Q76B58 766 aa21.92■■□□□ 1.1
TRIM65-204ENST00000543309 KIF20BQ96Q89 1820 aa21.92■■□□□ 1.1
TRIM65-204ENST00000543309 ANKRD26Q9UPS8 1709 aa21.89■■□□□ 1.1
TRIM65-204ENST00000543309 TTC21AQ8NDW8 1320 aa21.89■■□□□ 1.1
TRIM65-204ENST00000543309 MEX3CQ5U5Q3 659 aaKnown RBP21.89■■□□□ 1.09
TRIM65-204ENST00000543309 ANP32CO43423 234 aa21.88■■□□□ 1.09
TRIM65-204ENST00000543309 NPHP3Q7Z494 1330 aa21.87■■□□□ 1.09
TRIM65-204ENST00000543309 TRPM3Q9HCF6 1732 aaPredicted RBP21.87■■□□□ 1.09
TRIM65-204ENST00000543309 ZNF772Q68DY9 489 aaPredicted RBP21.87■■□□□ 1.09
TRIM65-204ENST00000543309 TTC21BQ7Z4L5 1316 aa21.86■■□□□ 1.09
TRIM65-204ENST00000543309 PARD3Q8TEW0 1356 aa21.86■■□□□ 1.09
TRIM65-204ENST00000543309 USP54Q70EL1 1684 aa21.85■■□□□ 1.09
TRIM65-204ENST00000543309 FOXO3O43524 673 aa21.85■■□□□ 1.09
TRIM65-204ENST00000543309 PSME1Q06323 249 aa21.85■■□□□ 1.09
TRIM65-204ENST00000543309 PXDNQ92626 1479 aa21.84■■□□□ 1.09
TRIM65-204ENST00000543309 RALBP1Q15311 655 aa21.84■■□□□ 1.09
TRIM65-204ENST00000543309 PRKRIP1Q9H875 184 aaPredicted RBP21.84■■□□□ 1.09
TRIM65-204ENST00000543309 FYB1O15117 783 aa21.83■■□□□ 1.09
TRIM65-204ENST00000543309 SBNO1A3KN83 1393 aa21.83■■□□□ 1.08
TRIM65-204ENST00000543309 PIK3C2AO00443 1686 aa21.82■■□□□ 1.08
TRIM65-204ENST00000543309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.82■■□□□ 1.08
TRIM65-204ENST00000543309 CC2D1BQ5T0F9 858 aaKnown RBP21.81■■□□□ 1.08
TRIM65-204ENST00000543309 KRT28Q7Z3Y7 464 aa21.81■■□□□ 1.08
TRIM65-204ENST00000543309 CDK12Q9NYV4 1490 aaPredicted RBP21.81■■□□□ 1.08
TRIM65-204ENST00000543309 ALS2Q96Q42 1657 aa21.81■■□□□ 1.08
TRIM65-204ENST00000543309 USP31Q70CQ4 1352 aa21.8■■□□□ 1.08
TRIM65-204ENST00000543309 OVOS2A0A0J9YW53 1432 aa21.79■■□□□ 1.08
TRIM65-204ENST00000543309 OVOS2Q6IE36 1432 aa21.79■■□□□ 1.08
TRIM65-204ENST00000543309 SOS2Q07890 1332 aaPredicted RBP21.79■■□□□ 1.08
TRIM65-204ENST00000543309 NME9Q86XW9 330 aa21.78■■□□□ 1.08
TRIM65-204ENST00000543309 PNPLA6Q8IY17 1366 aa21.77■■□□□ 1.08
TRIM65-204ENST00000543309 NUTM2BA6NNL0 878 aaPredicted RBP21.77■■□□□ 1.08
TRIM65-204ENST00000543309 NUTM2EB1AL46 878 aaPredicted RBP21.77■■□□□ 1.08
TRIM65-204ENST00000543309 NUTM2AQ8IVF1 878 aaPredicted RBP21.77■■□□□ 1.08
TRIM65-204ENST00000543309 GGNBP2Q9H3C7 697 aa21.77■■□□□ 1.08
TRIM65-204ENST00000543309 TNS3Q68CZ2 1445 aa21.76■■□□□ 1.07
TRIM65-204ENST00000543309 MORC1Q86VD1 984 aa21.76■■□□□ 1.07
TRIM65-204ENST00000543309 MARF1Q9Y4F3 1742 aaKnown RBP21.76■■□□□ 1.07
TRIM65-204ENST00000543309 PAK3O75914 559 aaPredicted RBP21.75■■□□□ 1.07
TRIM65-204ENST00000543309 MIER1Q8N108 512 aa21.75■■□□□ 1.07
TRIM65-204ENST00000543309 LRRC59Q96AG4 307 aaKnown RBP21.75■■□□□ 1.07
TRIM65-204ENST00000543309 COG3Q96JB2 828 aa21.75■■□□□ 1.07
TRIM65-204ENST00000543309 AFF2P51816 1311 aa21.75■■□□□ 1.07
TRIM65-204ENST00000543309 MYBBP1AQ9BQG0 1328 aaKnown RBP21.75■■□□□ 1.07
TRIM65-204ENST00000543309 XPCQ01831 940 aaPredicted RBP21.74■■□□□ 1.07
TRIM65-204ENST00000543309 ABTB2Q8N961 1025 aa21.74■■□□□ 1.07
TRIM65-204ENST00000543309 ARHGEF10O15013 1369 aa21.74■■□□□ 1.07
TRIM65-204ENST00000543309 RXRBP28702 533 aa21.73■■□□□ 1.07
TRIM65-204ENST00000543309 DDX17Q92841 729 aaKnown RBP21.73■■□□□ 1.07
TRIM65-204ENST00000543309 SPATA31A3Q5VYP0 1347 aa21.73■■□□□ 1.07
TRIM65-204ENST00000543309 UPF1Q92900 1129 aaKnown RBP eCLIP21.72■■□□□ 1.07
TRIM65-204ENST00000543309 CCER2I3L3R5 266 aa21.71■■□□□ 1.07
TRIM65-204ENST00000543309 NLRP13Q86W25 1043 aa21.71■■□□□ 1.07
TRIM65-204ENST00000543309 AATKQ6ZMQ8 1374 aa21.71■■□□□ 1.07
TRIM65-204ENST00000543309 NLRP6P59044 892 aa21.7■■□□□ 1.06
TRIM65-204ENST00000543309 CNGB1Q14028 1251 aaPredicted RBP21.7■■□□□ 1.06
TRIM65-204ENST00000543309 SLIT3O75094 1523 aa21.7■■□□□ 1.06
TRIM65-204ENST00000543309 ZRANB1Q9UGI0 708 aa21.69■■□□□ 1.06
TRIM65-204ENST00000543309 USP19O94966 1318 aa21.69■■□□□ 1.06
TRIM65-204ENST00000543309 RGS12O14924 1447 aa21.69■■□□□ 1.06
TRIM65-204ENST00000543309 COL22A1Q8NFW1 1626 aaPredicted RBP21.69■■□□□ 1.06
TRIM65-204ENST00000543309 PPP2R1AP30153 589 aa21.68■■□□□ 1.06
TRIM65-204ENST00000543309 CRYBG1Q9Y4K1 1723 aa21.68■■□□□ 1.06
TRIM65-204ENST00000543309 C8orf37Q96NL8 207 aa21.67■■□□□ 1.06
TRIM65-204ENST00000543309 SMG6Q86US8 1419 aaKnown RBP21.66■■□□□ 1.06
TRIM65-204ENST00000543309 PHRF1Q9P1Y6 1649 aaKnown RBP21.65■■□□□ 1.06
TRIM65-204ENST00000543309 NFAT5O94916 1531 aa21.65■■□□□ 1.06
TRIM65-204ENST00000543309 KCNH5Q8NCM2 988 aa21.64■■□□□ 1.05
TRIM65-204ENST00000543309 MAP2P11137 1827 aaKnown RBP21.64■■□□□ 1.05
TRIM65-204ENST00000543309 NUTM2GQ5VZR2 741 aa21.63■■□□□ 1.05
TRIM65-204ENST00000543309 LMOD2Q6P5Q4 547 aa21.63■■□□□ 1.05
TRIM65-204ENST00000543309 TNNT2P45379 298 aaPredicted RBP21.62■■□□□ 1.05
TRIM65-204ENST00000543309 ABCA3Q99758 1704 aa21.62■■□□□ 1.05
TRIM65-204ENST00000543309 RBM6P78332 1123 aaKnown RBP21.61■■□□□ 1.05
TRIM65-204ENST00000543309 KIF24Q5T7B8 1368 aa21.61■■□□□ 1.05
TRIM65-204ENST00000543309 QTRT2Q9H974 415 aaKnown RBP21.6■■□□□ 1.05
TRIM65-204ENST00000543309 INSRP06213 1382 aa21.6■■□□□ 1.05
TRIM65-204ENST00000543309 ADAMTS2O95450 1211 aa21.59■■□□□ 1.05
TRIM65-204ENST00000543309 POLKQ9UBT6 870 aa21.59■■□□□ 1.05
TRIM65-204ENST00000543309 GCP02774 474 aa21.58■■□□□ 1.05
TRIM65-204ENST00000543309 MTHFSP49914 203 aa21.58■■□□□ 1.05
TRIM65-204ENST00000543309 LTN1O94822 1766 aa21.58■■□□□ 1.04
TRIM65-204ENST00000543309 ABCC6O95255 1503 aa21.57■■□□□ 1.04
TRIM65-204ENST00000543309 NGLY1Q96IV0 654 aa21.57■■□□□ 1.04
TRIM65-204ENST00000543309 RTL1A6NKG5 1358 aa21.57■■□□□ 1.04
TRIM65-204ENST00000543309 CFAP53Q96M91 514 aa21.56■■□□□ 1.04
TRIM65-204ENST00000543309 MRS2Q9HD23 443 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms