RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 PSME1Q06323 249 aa14.48□□□□□ -0.09
DDB1-221ENST00000543162 MORC1Q86VD1 984 aa14.48□□□□□ -0.09
DDB1-221ENST00000543162 GGNBP2Q9H3C7 697 aa14.48□□□□□ -0.09
DDB1-221ENST00000543162 SSH2Q76I76 1423 aa14.48□□□□□ -0.09
DDB1-221ENST00000543162 BRD4O60885 1362 aaPredicted RBP14.47□□□□□ -0.09
DDB1-221ENST00000543162 TTC21AQ8NDW8 1320 aa14.47□□□□□ -0.09
DDB1-221ENST00000543162 FOXO3O43524 673 aa14.47□□□□□ -0.09
DDB1-221ENST00000543162 NME9Q86XW9 330 aa14.46□□□□□ -0.09
DDB1-221ENST00000543162 ANKRD26Q9UPS8 1709 aa14.46□□□□□ -0.1
DDB1-221ENST00000543162 PAK3O75914 559 aaPredicted RBP14.45□□□□□ -0.1
DDB1-221ENST00000543162 BRINP3Q76B58 766 aa14.45□□□□□ -0.1
DDB1-221ENST00000543162 KRT28Q7Z3Y7 464 aa14.44□□□□□ -0.1
DDB1-221ENST00000543162 NLRP13Q86W25 1043 aa14.44□□□□□ -0.1
DDB1-221ENST00000543162 COG3Q96JB2 828 aa14.44□□□□□ -0.1
DDB1-221ENST00000543162 NPHP3Q7Z494 1330 aa14.43□□□□□ -0.1
DDB1-221ENST00000543162 PPP2R1AP30153 589 aa14.43□□□□□ -0.1
DDB1-221ENST00000543162 TNNT2P45379 298 aaPredicted RBP14.43□□□□□ -0.1
DDB1-221ENST00000543162 XPCQ01831 940 aaPredicted RBP14.43□□□□□ -0.1
DDB1-221ENST00000543162 MRS2Q9HD23 443 aa14.42□□□□□ -0.1
DDB1-221ENST00000543162 ZRANB1Q9UGI0 708 aa14.42□□□□□ -0.1
DDB1-221ENST00000543162 ABTB2Q8N961 1025 aa14.41□□□□□ -0.1
DDB1-221ENST00000543162 DDX17Q92841 729 aaKnown RBP14.41□□□□□ -0.1
DDB1-221ENST00000543162 PIK3C2AO00443 1686 aa14.41□□□□□ -0.1
DDB1-221ENST00000543162 IQSEC2Q5JU85 1478 aa14.4□□□□□ -0.1
DDB1-221ENST00000543162 USP31Q70CQ4 1352 aa14.4□□□□□ -0.1
DDB1-221ENST00000543162 TOM1O60784 492 aa14.4□□□□□ -0.1
DDB1-221ENST00000543162 NLRP6P59044 892 aa14.4□□□□□ -0.1
DDB1-221ENST00000543162 CCDC184Q52MB2 194 aa14.4□□□□□ -0.1
DDB1-221ENST00000543162 TRPM3Q9HCF6 1732 aaPredicted RBP14.4□□□□□ -0.1
DDB1-221ENST00000543162 OVOS2A0A0J9YW53 1432 aa14.4□□□□□ -0.1
DDB1-221ENST00000543162 OVOS2Q6IE36 1432 aa14.4□□□□□ -0.1
DDB1-221ENST00000543162 SCAF1Q9H7N4 1312 aaKnown RBP14.4□□□□□ -0.1
DDB1-221ENST00000543162 PXDNQ92626 1479 aa14.38□□□□□ -0.11
DDB1-221ENST00000543162 SBNO1A3KN83 1393 aa14.38□□□□□ -0.11
DDB1-221ENST00000543162 NUTM2GQ5VZR2 741 aa14.38□□□□□ -0.11
DDB1-221ENST00000543162 LMOD2Q6P5Q4 547 aa14.38□□□□□ -0.11
DDB1-221ENST00000543162 CERKQ8TCT0 537 aa14.38□□□□□ -0.11
DDB1-221ENST00000543162 ROBO1Q9Y6N7 1651 aa14.37□□□□□ -0.11
DDB1-221ENST00000543162 USP54Q70EL1 1684 aa14.36□□□□□ -0.11
DDB1-221ENST00000543162 UBAP1LF5GYI3 381 aa14.36□□□□□ -0.11
DDB1-221ENST00000543162 MTHFSP49914 203 aa14.36□□□□□ -0.11
DDB1-221ENST00000543162 NHSL1Q5SYE7 1610 aa14.36□□□□□ -0.11
DDB1-221ENST00000543162 SOS2Q07890 1332 aaPredicted RBP14.36□□□□□ -0.11
DDB1-221ENST00000543162 AATKQ6ZMQ8 1374 aa14.35□□□□□ -0.11
DDB1-221ENST00000543162 TNS3Q68CZ2 1445 aa14.35□□□□□ -0.11
DDB1-221ENST00000543162 ALS2Q96Q42 1657 aa14.35□□□□□ -0.11
DDB1-221ENST00000543162 SPATA31A3Q5VYP0 1347 aa14.35□□□□□ -0.11
DDB1-221ENST00000543162 SOX12O15370 315 aa14.34□□□□□ -0.11
DDB1-221ENST00000543162 PIP4K2BP78356 416 aa14.34□□□□□ -0.11
DDB1-221ENST00000543162 CFAP53Q96M91 514 aa14.34□□□□□ -0.11
DDB1-221ENST00000543162 MARF1Q9Y4F3 1742 aaKnown RBP14.34□□□□□ -0.11
DDB1-221ENST00000543162 ARHGEF10O15013 1369 aa14.34□□□□□ -0.11
DDB1-221ENST00000543162 FBLN1P23142 703 aa14.33□□□□□ -0.12
DDB1-221ENST00000543162 POLKQ9UBT6 870 aa14.33□□□□□ -0.12
DDB1-221ENST00000543162 MAP2P11137 1827 aaKnown RBP14.33□□□□□ -0.12
DDB1-221ENST00000543162 PPM1GO15355 546 aaPredicted RBP14.32□□□□□ -0.12
DDB1-221ENST00000543162 RRS1Q15050 365 aaKnown RBP14.32□□□□□ -0.12
DDB1-221ENST00000543162 KCNH5Q8NCM2 988 aa14.32□□□□□ -0.12
DDB1-221ENST00000543162 PNISRQ8TF01 805 aaKnown RBP14.32□□□□□ -0.12
DDB1-221ENST00000543162 AHDC1Q5TGY3 1603 aaPredicted RBP14.32□□□□□ -0.12
DDB1-221ENST00000543162 PLEKHG5O94827 1062 aa14.31□□□□□ -0.12
DDB1-221ENST00000543162 FAM9BQ8IZU0 186 aa14.31□□□□□ -0.12
DDB1-221ENST00000543162 EMILIN1Q9Y6C2 1016 aa14.31□□□□□ -0.12
DDB1-221ENST00000543162 USP19O94966 1318 aa14.31□□□□□ -0.12
DDB1-221ENST00000543162 SMG6Q86US8 1419 aaKnown RBP14.31□□□□□ -0.12
DDB1-221ENST00000543162 SLIT3O75094 1523 aa14.3□□□□□ -0.12
DDB1-221ENST00000543162 GCP02774 474 aa14.29□□□□□ -0.12
DDB1-221ENST00000543162 WDR43Q15061 677 aaKnown RBP eCLIP14.29□□□□□ -0.12
DDB1-221ENST00000543162 MAP3K19Q56UN5 1328 aa14.29□□□□□ -0.12
DDB1-221ENST00000543162 CDK12Q9NYV4 1490 aaPredicted RBP14.29□□□□□ -0.12
DDB1-221ENST00000543162 PHLPP1O60346 1717 aa14.28□□□□□ -0.12
DDB1-221ENST00000543162 NFAT5O94916 1531 aa14.28□□□□□ -0.12
DDB1-221ENST00000543162 MED1Q15648 1581 aaPredicted RBP14.28□□□□□ -0.12
DDB1-221ENST00000543162 PNPLA6Q8IY17 1366 aa14.28□□□□□ -0.12
DDB1-221ENST00000543162 LRRC59Q96AG4 307 aaKnown RBP14.28□□□□□ -0.12
DDB1-221ENST00000543162 INSRP06213 1382 aa14.27□□□□□ -0.12
DDB1-221ENST00000543162 AMPHP49418 695 aa14.27□□□□□ -0.13
DDB1-221ENST00000543162 YTHDC1Q96MU7 727 aaKnown RBP14.27□□□□□ -0.13
DDB1-221ENST00000543162 COL3A1P02461 1466 aaPredicted RBP14.26□□□□□ -0.13
DDB1-221ENST00000543162 KIF24Q5T7B8 1368 aa14.26□□□□□ -0.13
DDB1-221ENST00000543162 DIAPH1O60610 1272 aaKnown RBP14.26□□□□□ -0.13
DDB1-221ENST00000543162 CABLES1Q8TDN4 633 aa14.26□□□□□ -0.13
DDB1-221ENST00000543162 NUDCQ9Y266 331 aa14.26□□□□□ -0.13
DDB1-221ENST00000543162 PHRF1Q9P1Y6 1649 aaKnown RBP14.26□□□□□ -0.13
DDB1-221ENST00000543162 FLT4P35916 1363 aa14.25□□□□□ -0.13
DDB1-221ENST00000543162 PEAK1Q9H792 1746 aa14.25□□□□□ -0.13
DDB1-221ENST00000543162 ZBTB7CA1YPR0 619 aa14.25□□□□□ -0.13
DDB1-221ENST00000543162 COL16A1Q07092 1604 aaPredicted RBP14.25□□□□□ -0.13
DDB1-221ENST00000543162 LTN1O94822 1766 aa14.24□□□□□ -0.13
DDB1-221ENST00000543162 CRYBG1Q9Y4K1 1723 aa14.24□□□□□ -0.13
DDB1-221ENST00000543162 RTL1A6NKG5 1358 aa14.24□□□□□ -0.13
DDB1-221ENST00000543162 SHPRHQ149N8 1683 aa14.24□□□□□ -0.13
DDB1-221ENST00000543162 HAP1P54257 671 aaPredicted RBP14.24□□□□□ -0.13
DDB1-221ENST00000543162 HOXC9P31274 260 aa14.23□□□□□ -0.13
DDB1-221ENST00000543162 ZC3H6P61129 1189 aaKnown RBP14.23□□□□□ -0.13
DDB1-221ENST00000543162 HSP90AB2PQ58FF8 381 aa14.23□□□□□ -0.13
DDB1-221ENST00000543162 ARHGEF25Q86VW2 580 aa14.23□□□□□ -0.13
DDB1-221ENST00000543162 ADAMTS8Q9UP79 889 aa14.23□□□□□ -0.13
DDB1-221ENST00000543162 U2SURPO15042 1029 aaKnown RBP14.22□□□□□ -0.13
DDB1-221ENST00000543162 U2AF1L5P0DN76 240 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms