RNA–Protein interactions for RNA: ENST00000542279.5

GTF2H3-209, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-209ENST00000542279 LINC01559Q495D7 138 aa7.68□□□□□ -1.18
GTF2H3-209ENST00000542279 FAM174AQ8TBP5 190 aa7.68□□□□□ -1.18
GTF2H3-209ENST00000542279 UNC93B1Q9H1C4 597 aa7.68□□□□□ -1.18
GTF2H3-209ENST00000542279 EVA1BQ9NVM1 165 aa7.68□□□□□ -1.18
GTF2H3-209ENST00000542279 TLL2Q9Y6L7 1015 aa7.68□□□□□ -1.18
GTF2H3-209ENST00000542279 BMP2P12643 396 aa7.67□□□□□ -1.18
GTF2H3-209ENST00000542279 TIMP2P16035 220 aa7.67□□□□□ -1.18
GTF2H3-209ENST00000542279 MDM2Q00987 491 aaPredicted RBP7.67□□□□□ -1.18
GTF2H3-209ENST00000542279 ARID5BQ14865 1188 aa7.67□□□□□ -1.18
GTF2H3-209ENST00000542279 GPAT2Q6NUI2 795 aa7.67□□□□□ -1.18
GTF2H3-209ENST00000542279 MARSP56192 900 aaKnown RBP7.66□□□□□ -1.18
GTF2H3-209ENST00000542279 GUCA2AQ02747 115 aa7.66□□□□□ -1.18
GTF2H3-209ENST00000542279 GPR37O15354 613 aa7.65□□□□□ -1.18
GTF2H3-209ENST00000542279 GSK3AP49840 483 aa7.65□□□□□ -1.18
GTF2H3-209ENST00000542279 KCNH2Q12809 1159 aa7.65□□□□□ -1.18
GTF2H3-209ENST00000542279 PTPRNQ16849 979 aa7.65□□□□□ -1.18
GTF2H3-209ENST00000542279 ZNF511Q8NB15 262 aa7.65□□□□□ -1.18
GTF2H3-209ENST00000542279 CNTNAP3BQ96NU0 1288 aa7.65□□□□□ -1.18
GTF2H3-209ENST00000542279 CNTNAP3Q9BZ76 1288 aa7.65□□□□□ -1.18
GTF2H3-209ENST00000542279 SPTLC1O15269 473 aa7.64□□□□□ -1.19
GTF2H3-209ENST00000542279 ZIC2O95409 532 aaPredicted RBP7.64□□□□□ -1.19
GTF2H3-209ENST00000542279 FDX1P10109 184 aa7.64□□□□□ -1.19
GTF2H3-209ENST00000542279 FOXK2Q01167 660 aa7.64□□□□□ -1.19
GTF2H3-209ENST00000542279 TULP1O00294 542 aaPredicted RBP7.63□□□□□ -1.19
GTF2H3-209ENST00000542279 SVOPQ8N4V2 548 aa7.63□□□□□ -1.19
GTF2H3-209ENST00000542279 DNMT3AQ9Y6K1 912 aaPredicted RBP7.63□□□□□ -1.19
GTF2H3-209ENST00000542279 CTHP32929 405 aa7.62□□□□□ -1.19
GTF2H3-209ENST00000542279 IRS1P35568 1242 aa7.62□□□□□ -1.19
GTF2H3-209ENST00000542279 MAP2K5Q13163 448 aa7.62□□□□□ -1.19
GTF2H3-209ENST00000542279 AGERQ15109 404 aa7.62□□□□□ -1.19
GTF2H3-209ENST00000542279 CLCN1P35523 988 aa7.61□□□□□ -1.19
GTF2H3-209ENST00000542279 NR5A1Q13285 461 aa7.61□□□□□ -1.19
GTF2H3-209ENST00000542279 KANK3Q6NY19 840 aa7.61□□□□□ -1.19
GTF2H3-209ENST00000542279 IRF6O14896 467 aa7.6□□□□□ -1.19
GTF2H3-209ENST00000542279 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.6□□□□□ -1.19
GTF2H3-209ENST00000542279 SCARF2Q96GP6 870 aaPredicted RBP7.6□□□□□ -1.19
GTF2H3-209ENST00000542279 GPCPD1Q9NPB8 672 aa7.6□□□□□ -1.19
GTF2H3-209ENST00000542279 SPDYE5A6NIY4 337 aa7.59□□□□□ -1.19
GTF2H3-209ENST00000542279 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.59□□□□□ -1.19
GTF2H3-209ENST00000542279 ZFAND3Q9H8U3 227 aa7.59□□□□□ -1.19
GTF2H3-209ENST00000542279 MINK1Q8N4C8 1332 aaPredicted RBP7.58□□□□□ -1.2
GTF2H3-209ENST00000542279 ITPKCQ96DU7 683 aa7.58□□□□□ -1.2
GTF2H3-209ENST00000542279 CDK15Q96Q40 435 aa7.58□□□□□ -1.2
GTF2H3-209ENST00000542279 KLF16Q9BXK1 252 aaPredicted RBP7.58□□□□□ -1.2
GTF2H3-209ENST00000542279 COL25A1Q9BXS0 654 aaPredicted RBP7.58□□□□□ -1.2
GTF2H3-209ENST00000542279 LINC00528Q8N1L1 170 aa7.57□□□□□ -1.2
GTF2H3-209ENST00000542279 PRR7Q8TB68 274 aa7.57□□□□□ -1.2
GTF2H3-209ENST00000542279 TSEN34Q9BSV6 310 aaKnown RBP7.57□□□□□ -1.2
GTF2H3-209ENST00000542279 DESI1Q6ICB0 168 aa7.55□□□□□ -1.2
GTF2H3-209ENST00000542279 GPR161Q8N6U8 529 aaKnown RBP7.55□□□□□ -1.2
GTF2H3-209ENST00000542279 FAM217BQ9NTX9 383 aaPredicted RBP7.55□□□□□ -1.2
GTF2H3-209ENST00000542279 SOS2Q07890 1332 aaPredicted RBP7.54□□□□□ -1.2
GTF2H3-209ENST00000542279 TTLL8A6PVC2 850 aa7.54□□□□□ -1.2
GTF2H3-209ENST00000542279 MTMR2Q13614 643 aa7.54□□□□□ -1.2
GTF2H3-209ENST00000542279 ZNF385CQ66K41 422 aaPredicted RBP7.54□□□□□ -1.2
GTF2H3-209ENST00000542279 DNMT3LQ9UJW3 386 aa7.54□□□□□ -1.2
GTF2H3-209ENST00000542279 PCDHGC3Q9UN70 934 aa7.54□□□□□ -1.2
GTF2H3-209ENST00000542279 MAP3K10Q02779 954 aa7.53□□□□□ -1.2
GTF2H3-209ENST00000542279 PTSQ03393 145 aa7.53□□□□□ -1.2
GTF2H3-209ENST00000542279 BPHLQ86WA6 291 aaPredicted RBP7.53□□□□□ -1.2
GTF2H3-209ENST00000542279 ENAMQ9NRM1 1142 aa7.53□□□□□ -1.2
GTF2H3-209ENST00000542279 KRT76Q01546 638 aa7.52□□□□□ -1.21
GTF2H3-209ENST00000542279 SV2AQ7L0J3 742 aa7.52□□□□□ -1.21
GTF2H3-209ENST00000542279 MEIOBQ8N635 442 aa7.52□□□□□ -1.21
GTF2H3-209ENST00000542279 NANOS1Q8WY41 292 aaKnown RBP7.52□□□□□ -1.21
GTF2H3-209ENST00000542279 CDC14CA4D256 554 aa7.51□□□□□ -1.21
GTF2H3-209ENST00000542279 FIGNL2A6NMB9 653 aa7.51□□□□□ -1.21
GTF2H3-209ENST00000542279 MSTNO14793 375 aa7.51□□□□□ -1.21
GTF2H3-209ENST00000542279 FOXJ1Q92949 421 aa7.51□□□□□ -1.21
GTF2H3-209ENST00000542279 EMILIN1Q9Y6C2 1016 aa7.51□□□□□ -1.21
GTF2H3-209ENST00000542279 NDUFV2P19404 249 aa7.5□□□□□ -1.21
GTF2H3-209ENST00000542279 GRM5P41594 1212 aa7.5□□□□□ -1.21
GTF2H3-209ENST00000542279 XP32Q5T750 250 aa7.5□□□□□ -1.21
GTF2H3-209ENST00000542279 VWA5B2Q8N398 1253 aa7.5□□□□□ -1.21
GTF2H3-209ENST00000542279 CCDC155Q8N6L0 562 aa7.5□□□□□ -1.21
GTF2H3-209ENST00000542279 ZC3H15Q8WU90 426 aaKnown RBP7.5□□□□□ -1.21
GTF2H3-209ENST00000542279 NR3C2P08235 984 aa7.49□□□□□ -1.21
GTF2H3-209ENST00000542279 SSTR3P32745 418 aaPredicted RBP7.49□□□□□ -1.21
GTF2H3-209ENST00000542279 LYPD8Q6UX82 237 aa7.49□□□□□ -1.21
GTF2H3-209ENST00000542279 SPIRE2Q8WWL2 714 aa7.49□□□□□ -1.21
GTF2H3-209ENST00000542279 PHF20L1A8MW92 1017 aa7.48□□□□□ -1.21
GTF2H3-209ENST00000542279 SLURP2P0DP57 97 aa7.48□□□□□ -1.21
GTF2H3-209ENST00000542279 VASH1Q7L8A9 365 aaPredicted RBP7.48□□□□□ -1.21
GTF2H3-209ENST00000542279 ARMC2Q8NEN0 867 aa7.48□□□□□ -1.21
GTF2H3-209ENST00000542279 MOXD2PA6NHM9 499 aa7.47□□□□□ -1.21
GTF2H3-209ENST00000542279 ARHGEF15O94989 841 aa7.47□□□□□ -1.21
GTF2H3-209ENST00000542279 GALNT6Q8NCL4 622 aa7.47□□□□□ -1.21
GTF2H3-209ENST00000542279 CCDC102AQ96A19 550 aa7.47□□□□□ -1.21
GTF2H3-209ENST00000542279 DIXDC1Q155Q3 683 aa7.46□□□□□ -1.22
GTF2H3-209ENST00000542279 BEND7Q8N7W2 519 aaPredicted RBP7.46□□□□□ -1.22
GTF2H3-209ENST00000542279 WHAMMQ8TF30 809 aa7.46□□□□□ -1.22
GTF2H3-209ENST00000542279 PGPEP1Q9NXJ5 209 aa7.46□□□□□ -1.22
GTF2H3-209ENST00000542279 ADAM23O75077 832 aa7.45□□□□□ -1.22
GTF2H3-209ENST00000542279 RNFT1Q5M7Z0 435 aa7.45□□□□□ -1.22
GTF2H3-209ENST00000542279 PODNQ7Z5L7 613 aa7.45□□□□□ -1.22
GTF2H3-209ENST00000542279 CCDC116Q8IYX3 515 aa7.45□□□□□ -1.22
GTF2H3-209ENST00000542279 ITGA6P23229 1130 aa7.44□□□□□ -1.22
GTF2H3-209ENST00000542279 FSHRP23945 695 aa7.44□□□□□ -1.22
GTF2H3-209ENST00000542279 SLC24A3Q9HC58 644 aa7.44□□□□□ -1.22
GTF2H3-209ENST00000542279 ADAMTS2O95450 1211 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms