RNA–Protein interactions for RNA: ENST00000541272.1

UBC-209, Transcript of ubiquitin C, humanhuman

TSL 5

Gene UBC, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-209ENST00000541272 PPARGC1BQ86YN6 1023 aaKnown RBP17.42■□□□□ 0.38
UBC-209ENST00000541272 EN1Q05925 392 aaPredicted RBP17.41■□□□□ 0.38
UBC-209ENST00000541272 PSDA5PKW4 1024 aaPredicted RBP17.4■□□□□ 0.38
UBC-209ENST00000541272 TULP4Q9NRJ4 1543 aa17.4■□□□□ 0.38
UBC-209ENST00000541272 PMFBP1Q8TBY8 1022 aa17.39■□□□□ 0.37
UBC-209ENST00000541272 CAMKK2Q96RR4 588 aa17.39■□□□□ 0.37
UBC-209ENST00000541272 SPATA31A1Q5TZJ5 1347 aa17.39■□□□□ 0.37
UBC-209ENST00000541272 WASLO00401 505 aaPredicted RBP17.38■□□□□ 0.37
UBC-209ENST00000541272 BARGINQ6ZT62 677 aa17.38■□□□□ 0.37
UBC-209ENST00000541272 ADGRB1O14514 1584 aa17.37■□□□□ 0.37
UBC-209ENST00000541272 R3HDM1Q15032 1099 aaKnown RBP17.37■□□□□ 0.37
UBC-209ENST00000541272 ATP7BP35670 1465 aa17.37■□□□□ 0.37
UBC-209ENST00000541272 TNS1Q9HBL0 1735 aaKnown RBP17.36■□□□□ 0.37
UBC-209ENST00000541272 PRDM11Q9NQV5 511 aa17.36■□□□□ 0.37
UBC-209ENST00000541272 CRYBG1Q9Y4K1 1723 aa17.35■□□□□ 0.37
UBC-209ENST00000541272 NBPF8Q3BBV2 869 aa17.35■□□□□ 0.37
UBC-209ENST00000541272 NBPF14Q5TI25 921 aa17.35■□□□□ 0.37
UBC-209ENST00000541272 NGDNQ8NEJ9 315 aaKnown RBP17.35■□□□□ 0.37
UBC-209ENST00000541272 THRAP3Q9Y2W1 955 aaKnown RBP17.35■□□□□ 0.37
UBC-209ENST00000541272 EZH2Q15910 746 aaKnown RBP17.33■□□□□ 0.36
UBC-209ENST00000541272 PRR36Q9H6K5 1346 aa17.32■□□□□ 0.36
UBC-209ENST00000541272 SAFB2Q14151 953 aaKnown RBP eCLIP17.32■□□□□ 0.36
UBC-209ENST00000541272 APBA3O96018 575 aa17.31■□□□□ 0.36
UBC-209ENST00000541272 ITSN1Q15811 1721 aa17.3■□□□□ 0.36
UBC-209ENST00000541272 POLR3AO14802 1390 aaPredicted RBP17.3■□□□□ 0.36
UBC-209ENST00000541272 BRD4O60885 1362 aaPredicted RBP17.3■□□□□ 0.36
UBC-209ENST00000541272 CPDO75976 1380 aa17.3■□□□□ 0.36
UBC-209ENST00000541272 KIAA0232Q92628 1395 aa17.3■□□□□ 0.36
UBC-209ENST00000541272 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
UBC-209ENST00000541272 TRIM37O94972 964 aa17.3■□□□□ 0.36
UBC-209ENST00000541272 PDE3BQ13370 1112 aa17.3■□□□□ 0.36
UBC-209ENST00000541272 TRAK1Q9UPV9 953 aa17.3■□□□□ 0.36
UBC-209ENST00000541272 NINLQ9Y2I6 1382 aa17.28■□□□□ 0.36
UBC-209ENST00000541272 PAK3O75914 559 aaPredicted RBP17.28■□□□□ 0.36
UBC-209ENST00000541272 RREB1Q92766 1687 aa17.28■□□□□ 0.36
UBC-209ENST00000541272 PLEKHG3A1L390 1219 aa17.27■□□□□ 0.36
UBC-209ENST00000541272 EVA1CP58658 441 aa17.27■□□□□ 0.36
UBC-209ENST00000541272 TCP11L2Q8N4U5 519 aa17.27■□□□□ 0.36
UBC-209ENST00000541272 NUDT16Q96DE0 195 aaKnown RBP17.27■□□□□ 0.36
UBC-209ENST00000541272 SPON1Q9HCB6 807 aa17.27■□□□□ 0.36
UBC-209ENST00000541272 SSH2Q76I76 1423 aa17.27■□□□□ 0.35
UBC-209ENST00000541272 MINK1Q8N4C8 1332 aaPredicted RBP17.26■□□□□ 0.35
UBC-209ENST00000541272 PLEKHG5O94827 1062 aa17.26■□□□□ 0.35
UBC-209ENST00000541272 YY1P25490 414 aa17.26■□□□□ 0.35
UBC-209ENST00000541272 FAM182BQ5T319 152 aa17.26■□□□□ 0.35
UBC-209ENST00000541272 HIRIP3Q9BW71 556 aaPredicted RBP17.26■□□□□ 0.35
UBC-209ENST00000541272 CCDC61Q9Y6R9 512 aa17.26■□□□□ 0.35
UBC-209ENST00000541272 PLSCR1O15162 318 aa17.25■□□□□ 0.35
UBC-209ENST00000541272 PHRF1Q9P1Y6 1649 aaKnown RBP17.25■□□□□ 0.35
UBC-209ENST00000541272 RGPD3A6NKT7 1758 aaPredicted RBP17.23■□□□□ 0.35
UBC-209ENST00000541272 RGPD4Q7Z3J3 1758 aa17.23■□□□□ 0.35
UBC-209ENST00000541272 KCNQ2O43526 872 aa17.23■□□□□ 0.35
UBC-209ENST00000541272 USP19O94966 1318 aa17.22■□□□□ 0.35
UBC-209ENST00000541272 STRN4Q9NRL3 753 aa17.22■□□□□ 0.35
UBC-209ENST00000541272 BCL9O00512 1426 aa17.21■□□□□ 0.35
UBC-209ENST00000541272 NUP188Q5SRE5 1749 aa17.21■□□□□ 0.35
UBC-209ENST00000541272 NLRP13Q86W25 1043 aa17.21■□□□□ 0.35
UBC-209ENST00000541272 DCAF11Q8TEB1 546 aa17.21■□□□□ 0.35
UBC-209ENST00000541272 LMO7Q8WWI1 1683 aa17.2■□□□□ 0.34
UBC-209ENST00000541272 ZC3H6P61129 1189 aaKnown RBP17.2■□□□□ 0.34
UBC-209ENST00000541272 CHRNA2Q15822 529 aa17.2■□□□□ 0.34
UBC-209ENST00000541272 PARP4Q9UKK3 1724 aaKnown RBP17.2■□□□□ 0.34
UBC-209ENST00000541272 ACEP12821 1306 aa17.2■□□□□ 0.34
UBC-209ENST00000541272 CAMTA1Q9Y6Y1 1673 aa17.2■□□□□ 0.34
UBC-209ENST00000541272 ABTB2Q8N961 1025 aa17.19■□□□□ 0.34
UBC-209ENST00000541272 CDK19Q9BWU1 502 aa17.19■□□□□ 0.34
UBC-209ENST00000541272 PPP1R1BQ9UD71 204 aaPredicted RBP17.19■□□□□ 0.34
UBC-209ENST00000541272 GCP02774 474 aa17.18■□□□□ 0.34
UBC-209ENST00000541272 LARP1Q6PKG0 1096 aaKnown RBP17.18■□□□□ 0.34
UBC-209ENST00000541272 CDCA7Q9BWT1 371 aaPredicted RBP17.18■□□□□ 0.34
UBC-209ENST00000541272 OVOS2A0A0G2JMS6 1433 aa17.18■□□□□ 0.34
UBC-209ENST00000541272 OVOS2A0A0J9YW53 1432 aa17.18■□□□□ 0.34
UBC-209ENST00000541272 OVOS2Q6IE36 1432 aa17.18■□□□□ 0.34
UBC-209ENST00000541272 ARHGEF28Q8N1W1 1705 aaKnown RBP17.18■□□□□ 0.34
UBC-209ENST00000541272 TOPAZ1Q8N9V7 1692 aa17.17■□□□□ 0.34
UBC-209ENST00000541272 CRB1P82279 1406 aa17.17■□□□□ 0.34
UBC-209ENST00000541272 NRKQ7Z2Y5 1582 aa17.17■□□□□ 0.34
UBC-209ENST00000541272 USP35Q9P2H5 1018 aa17.16■□□□□ 0.34
UBC-209ENST00000541272 COL5A2P05997 1499 aaPredicted RBP17.16■□□□□ 0.34
UBC-209ENST00000541272 AATKQ6ZMQ8 1374 aa17.15■□□□□ 0.34
UBC-209ENST00000541272 BCL11BQ9C0K0 894 aaPredicted RBP17.15■□□□□ 0.34
UBC-209ENST00000541272 KIAA1210Q9ULL0 1709 aa17.15■□□□□ 0.34
UBC-209ENST00000541272 KDM2AQ9Y2K7 1162 aa17.14■□□□□ 0.33
UBC-209ENST00000541272 RAB3GAP2Q9H2M9 1393 aa17.13■□□□□ 0.33
UBC-209ENST00000541272 PEAK1Q9H792 1746 aa17.13■□□□□ 0.33
UBC-209ENST00000541272 DDB1Q16531 1140 aa17.11■□□□□ 0.33
UBC-209ENST00000541272 NUTM2GQ5VZR2 741 aa17.09■□□□□ 0.33
UBC-209ENST00000541272 SLIT3O75094 1523 aa17.08■□□□□ 0.32
UBC-209ENST00000541272 PPIP5K1Q6PFW1 1433 aa17.07■□□□□ 0.32
UBC-209ENST00000541272 WDR17Q8IZU2 1322 aa17.07■□□□□ 0.32
UBC-209ENST00000541272 KCNH5Q8NCM2 988 aa17.07■□□□□ 0.32
UBC-209ENST00000541272 ZNF692Q9BU19 519 aaPredicted RBP17.07■□□□□ 0.32
UBC-209ENST00000541272 CASZ1Q86V15 1759 aa17.07■□□□□ 0.32
UBC-209ENST00000541272 SBF2Q86WG5 1849 aa17.06■□□□□ 0.32
UBC-209ENST00000541272 USP6P35125 1406 aa17.05■□□□□ 0.32
UBC-209ENST00000541272 LRRC37A3O60309 1634 aa17.04■□□□□ 0.32
UBC-209ENST00000541272 NLRP6P59044 892 aa17.04■□□□□ 0.32
UBC-209ENST00000541272 SRPK2P78362 688 aaKnown RBP17.04■□□□□ 0.32
UBC-209ENST00000541272 TOM1L2Q6ZVM7 507 aa17.04■□□□□ 0.32
UBC-209ENST00000541272 CARD10Q9BWT7 1032 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms