RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 USP8P40818 1118 aa17.86■□□□□ 0.45
SMARCA4-207ENST00000541122 RRP12Q5JTH9 1297 aaKnown RBP17.86■□□□□ 0.45
SMARCA4-207ENST00000541122 TNMDQ9H2S6 317 aa17.86■□□□□ 0.45
SMARCA4-207ENST00000541122 ANKRD1Q15327 319 aa17.86■□□□□ 0.45
SMARCA4-207ENST00000541122 RALYLQ86SE5 291 aaKnown RBP17.86■□□□□ 0.45
SMARCA4-207ENST00000541122 FILIP1LQ4L180 1135 aa17.85■□□□□ 0.45
SMARCA4-207ENST00000541122 ATF7IPQ6VMQ6 1270 aa17.85■□□□□ 0.45
SMARCA4-207ENST00000541122 EIF2S2P20042 333 aaKnown RBP17.85■□□□□ 0.45
SMARCA4-207ENST00000541122 PIP4K2AP48426 406 aaPredicted RBP17.85■□□□□ 0.45
SMARCA4-207ENST00000541122 PDE4CQ08493 712 aa17.85■□□□□ 0.45
SMARCA4-207ENST00000541122 NFXL1Q6ZNB6 911 aa17.85■□□□□ 0.45
SMARCA4-207ENST00000541122 DNAJC5BQ9UF47 199 aa17.85■□□□□ 0.45
SMARCA4-207ENST00000541122 CLASRPQ8N2M8 674 aaKnown RBP17.85■□□□□ 0.45
SMARCA4-207ENST00000541122 ZNF428Q96B54 188 aa17.85■□□□□ 0.45
SMARCA4-207ENST00000541122 EFCAB5A4FU69 1503 aa17.84■□□□□ 0.45
SMARCA4-207ENST00000541122 ERICH2A1L162 156 aa17.84■□□□□ 0.45
SMARCA4-207ENST00000541122 NBPF8Q3BBV2 869 aa17.84■□□□□ 0.45
SMARCA4-207ENST00000541122 CCDC184Q52MB2 194 aa17.84■□□□□ 0.45
SMARCA4-207ENST00000541122 EHBP1L1Q8N3D4 1523 aa17.84■□□□□ 0.45
SMARCA4-207ENST00000541122 NOB1Q9ULX3 412 aaKnown RBP17.84■□□□□ 0.45
SMARCA4-207ENST00000541122 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.83■□□□□ 0.45
SMARCA4-207ENST00000541122 MYO6Q9UM54 1294 aa17.83■□□□□ 0.44
SMARCA4-207ENST00000541122 FGD5Q6ZNL6 1462 aa17.83■□□□□ 0.44
SMARCA4-207ENST00000541122 FANCD2Q9BXW9 1451 aa17.83■□□□□ 0.44
SMARCA4-207ENST00000541122 CCDC9Q9Y3X0 531 aaKnown RBP17.82■□□□□ 0.44
SMARCA4-207ENST00000541122 TIAM1Q13009 1591 aa17.82■□□□□ 0.44
SMARCA4-207ENST00000541122 CBFA2T2O43439 604 aa17.82■□□□□ 0.44
SMARCA4-207ENST00000541122 DHX16O60231 1041 aaKnown RBP17.82■□□□□ 0.44
SMARCA4-207ENST00000541122 SLFN5Q08AF3 891 aa17.82■□□□□ 0.44
SMARCA4-207ENST00000541122 SRCIN1Q9C0H9 1055 aa17.82■□□□□ 0.44
SMARCA4-207ENST00000541122 CYP46A1Q9Y6A2 500 aa17.82■□□□□ 0.44
SMARCA4-207ENST00000541122 JMYQ8N9B5 988 aa17.81■□□□□ 0.44
SMARCA4-207ENST00000541122 ZSCAN31Q96LW9 406 aaPredicted RBP17.81■□□□□ 0.44
SMARCA4-207ENST00000541122 ERC1Q8IUD2 1116 aa17.81■□□□□ 0.44
SMARCA4-207ENST00000541122 NAP1L1P55209 391 aaKnown RBP17.81■□□□□ 0.44
SMARCA4-207ENST00000541122 FSD1Q9BTV5 496 aa17.8■□□□□ 0.44
SMARCA4-207ENST00000541122 GNAI2P04899 355 aa17.8■□□□□ 0.44
SMARCA4-207ENST00000541122 XBP1P17861 261 aa17.8■□□□□ 0.44
SMARCA4-207ENST00000541122 TWISTNBQ3B726 338 aaPredicted RBP17.8■□□□□ 0.44
SMARCA4-207ENST00000541122 BRMS1Q9HCU9 246 aa17.8■□□□□ 0.44
SMARCA4-207ENST00000541122 AMOTL1Q8IY63 956 aa17.8■□□□□ 0.44
SMARCA4-207ENST00000541122 DACH1Q9UI36 760 aa17.8■□□□□ 0.44
SMARCA4-207ENST00000541122 TTC5Q8N0Z6 440 aa17.8■□□□□ 0.44
SMARCA4-207ENST00000541122 KIAA0754O94854 1291 aa17.79■□□□□ 0.44
SMARCA4-207ENST00000541122 AXDND1Q5T1B0 1012 aaPredicted RBP17.79■□□□□ 0.44
SMARCA4-207ENST00000541122 NUP62CLQ9H1M0 184 aa17.79■□□□□ 0.44
SMARCA4-207ENST00000541122 PTPRGP23470 1445 aa17.79■□□□□ 0.44
SMARCA4-207ENST00000541122 STK38Q15208 465 aa17.79■□□□□ 0.44
SMARCA4-207ENST00000541122 CCDC30Q5VVM6 783 aa17.79■□□□□ 0.44
SMARCA4-207ENST00000541122 ERBINQ96RT1 1412 aa17.79■□□□□ 0.44
SMARCA4-207ENST00000541122 FOSBP53539 338 aa17.79■□□□□ 0.44
SMARCA4-207ENST00000541122 TMX4Q9H1E5 349 aaPredicted RBP17.79■□□□□ 0.44
SMARCA4-207ENST00000541122 ZNF644Q9H582 1327 aaPredicted RBP17.78■□□□□ 0.44
SMARCA4-207ENST00000541122 SURF6O75683 361 aaKnown RBP17.78■□□□□ 0.44
SMARCA4-207ENST00000541122 HMOX1P09601 288 aa17.78■□□□□ 0.44
SMARCA4-207ENST00000541122 BCL11BQ9C0K0 894 aaPredicted RBP17.78■□□□□ 0.44
SMARCA4-207ENST00000541122 CCT4P50991 539 aaKnown RBP17.78■□□□□ 0.44
SMARCA4-207ENST00000541122 CEP57L1Q8IYX8 460 aa17.78■□□□□ 0.44
SMARCA4-207ENST00000541122 DYNC1I1O14576 645 aa17.78■□□□□ 0.44
SMARCA4-207ENST00000541122 CLCN1P35523 988 aa17.78■□□□□ 0.44
SMARCA4-207ENST00000541122 GGNBP2Q9H3C7 697 aa17.78■□□□□ 0.44
SMARCA4-207ENST00000541122 PLEKHH1Q9ULM0 1364 aa17.77■□□□□ 0.44
SMARCA4-207ENST00000541122 GAPVD1Q14C86 1478 aa17.77■□□□□ 0.44
SMARCA4-207ENST00000541122 VPS53Q5VIR6 699 aa17.77■□□□□ 0.44
SMARCA4-207ENST00000541122 WWC1Q8IX03 1113 aa17.77■□□□□ 0.44
SMARCA4-207ENST00000541122 CALCOCO1Q9P1Z2 691 aa17.77■□□□□ 0.44
SMARCA4-207ENST00000541122 CGNQ9P2M7 1197 aaKnown RBP17.77■□□□□ 0.44
SMARCA4-207ENST00000541122 SERPINC1P01008 464 aa17.76■□□□□ 0.43
SMARCA4-207ENST00000541122 DEF6Q9H4E7 631 aa17.76■□□□□ 0.43
SMARCA4-207ENST00000541122 PPP6R1Q9UPN7 881 aa17.76■□□□□ 0.43
SMARCA4-207ENST00000541122 SYCE3A1L190 88 aa17.76■□□□□ 0.43
SMARCA4-207ENST00000541122 NECTIN2Q92692 538 aa17.76■□□□□ 0.43
SMARCA4-207ENST00000541122 LRRCC1Q9C099 1032 aa17.76■□□□□ 0.43
SMARCA4-207ENST00000541122 HMGXB3Q12766 1538 aa17.76■□□□□ 0.43
SMARCA4-207ENST00000541122 CFTRP13569 1480 aa17.76■□□□□ 0.43
SMARCA4-207ENST00000541122 POLA1P09884 1462 aaPredicted RBP17.76■□□□□ 0.43
SMARCA4-207ENST00000541122 DHX29Q7Z478 1369 aaKnown RBP17.76■□□□□ 0.43
SMARCA4-207ENST00000541122 CFAP45Q9UL16 551 aa17.75■□□□□ 0.43
SMARCA4-207ENST00000541122 FMNL2Q96PY5 1086 aa17.75■□□□□ 0.43
SMARCA4-207ENST00000541122 PRXQ9BXM0 1461 aa17.75■□□□□ 0.43
SMARCA4-207ENST00000541122 MAP3K11Q16584 847 aa17.75■□□□□ 0.43
SMARCA4-207ENST00000541122 UBXN4Q92575 508 aa17.75■□□□□ 0.43
SMARCA4-207ENST00000541122 TBC1D2Q9BYX2 928 aa17.75■□□□□ 0.43
SMARCA4-207ENST00000541122 C1orf115Q9H7X2 142 aa17.75■□□□□ 0.43
SMARCA4-207ENST00000541122 C11orf95C9JLR9 678 aaPredicted RBP17.74■□□□□ 0.43
SMARCA4-207ENST00000541122 CCDC183Q5T5S1 534 aa17.74■□□□□ 0.43
SMARCA4-207ENST00000541122 LARP1BQ659C4 914 aaKnown RBP17.74■□□□□ 0.43
SMARCA4-207ENST00000541122 PPFIBP1Q86W92 1011 aa17.74■□□□□ 0.43
SMARCA4-207ENST00000541122 TXLNBQ8N3L3 684 aa17.74■□□□□ 0.43
SMARCA4-207ENST00000541122 TMCO3Q6UWJ1 677 aa17.74■□□□□ 0.43
SMARCA4-207ENST00000541122 RPAP2Q8IXW5 612 aaPredicted RBP17.74■□□□□ 0.43
SMARCA4-207ENST00000541122 GBP3Q9H0R5 595 aa17.74■□□□□ 0.43
SMARCA4-207ENST00000541122 PRKAR2BP31323 418 aa17.73■□□□□ 0.43
SMARCA4-207ENST00000541122 SPATA32Q96LK8 384 aa17.73■□□□□ 0.43
SMARCA4-207ENST00000541122 NKTRP30414 1462 aaKnown RBP17.73■□□□□ 0.43
SMARCA4-207ENST00000541122 TSR2Q969E8 191 aaKnown RBP17.73■□□□□ 0.43
SMARCA4-207ENST00000541122 PRIMPOLQ96LW4 560 aa17.73■□□□□ 0.43
SMARCA4-207ENST00000541122 IQCEQ6IPM2 695 aa17.73■□□□□ 0.43
SMARCA4-207ENST00000541122 GAS2L2Q8NHY3 880 aa17.73■□□□□ 0.43
SMARCA4-207ENST00000541122 ZNHIT6Q9NWK9 470 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms