RNA–Protein interactions for RNA: ENST00000541097.5

LDHA-219, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-219ENST00000541097 ARHGEF10O15013 1369 aa9.76□□□□□ -0.85
LDHA-219ENST00000541097 GPRASP1Q5JY77 1395 aa9.76□□□□□ -0.85
LDHA-219ENST00000541097 ADGRB2O60241 1585 aa9.76□□□□□ -0.85
LDHA-219ENST00000541097 BCL9LQ86UU0 1499 aa9.76□□□□□ -0.85
LDHA-219ENST00000541097 CDK12Q9NYV4 1490 aaPredicted RBP9.76□□□□□ -0.85
LDHA-219ENST00000541097 FMN2Q9NZ56 1722 aa9.76□□□□□ -0.85
LDHA-219ENST00000541097 TNS3Q68CZ2 1445 aa9.75□□□□□ -0.85
LDHA-219ENST00000541097 FAM83GA6ND36 823 aa9.75□□□□□ -0.85
LDHA-219ENST00000541097 UNC5CLQ8IV45 518 aa9.75□□□□□ -0.85
LDHA-219ENST00000541097 CABLES1Q8TDN4 633 aa9.75□□□□□ -0.85
LDHA-219ENST00000541097 TULP4Q9NRJ4 1543 aa9.75□□□□□ -0.85
LDHA-219ENST00000541097 POLR3AO14802 1390 aaPredicted RBP9.75□□□□□ -0.85
LDHA-219ENST00000541097 GJD4Q96KN9 370 aaPredicted RBP9.74□□□□□ -0.85
LDHA-219ENST00000541097 ACEP12821 1306 aa9.74□□□□□ -0.85
LDHA-219ENST00000541097 COL22A1Q8NFW1 1626 aaPredicted RBP9.74□□□□□ -0.85
LDHA-219ENST00000541097 ONECUT3O60422 494 aaPredicted RBP9.73□□□□□ -0.85
LDHA-219ENST00000541097 UPF1Q92900 1129 aaKnown RBP eCLIP9.73□□□□□ -0.85
LDHA-219ENST00000541097 KIAA1210Q9ULL0 1709 aa9.73□□□□□ -0.85
LDHA-219ENST00000541097 ATRNO75882 1429 aa9.73□□□□□ -0.85
LDHA-219ENST00000541097 ATP7BP35670 1465 aa9.72□□□□□ -0.85
LDHA-219ENST00000541097 SLIT2O94813 1529 aa9.72□□□□□ -0.85
LDHA-219ENST00000541097 KIF1AQ12756 1690 aa9.72□□□□□ -0.85
LDHA-219ENST00000541097 SPDYE2BA6NHP3 402 aa9.72□□□□□ -0.85
LDHA-219ENST00000541097 SPDYE6P0CI01 402 aa9.72□□□□□ -0.85
LDHA-219ENST00000541097 SRPK2P78362 688 aaKnown RBP9.72□□□□□ -0.85
LDHA-219ENST00000541097 SPDYE2Q495Y8 402 aa9.72□□□□□ -0.85
LDHA-219ENST00000541097 LMOD2Q6P5Q4 547 aa9.72□□□□□ -0.85
LDHA-219ENST00000541097 PIP4P2Q8N4L2 257 aa9.72□□□□□ -0.85
LDHA-219ENST00000541097 CABP2Q9NPB3 220 aa9.72□□□□□ -0.85
LDHA-219ENST00000541097 CABP1Q9NZU7 370 aa9.72□□□□□ -0.85
LDHA-219ENST00000541097 ROCK2O75116 1388 aaKnown RBP9.72□□□□□ -0.85
LDHA-219ENST00000541097 USP32Q8NFA0 1604 aa9.71□□□□□ -0.85
LDHA-219ENST00000541097 PITPNM1O00562 1244 aa9.71□□□□□ -0.86
LDHA-219ENST00000541097 PAK3O75914 559 aaPredicted RBP9.71□□□□□ -0.86
LDHA-219ENST00000541097 VPS72Q15906 364 aa9.71□□□□□ -0.86
LDHA-219ENST00000541097 ZNF692Q9BU19 519 aaPredicted RBP9.71□□□□□ -0.86
LDHA-219ENST00000541097 TIMELESSQ9UNS1 1208 aa9.71□□□□□ -0.86
LDHA-219ENST00000541097 EVC2Q86UK5 1308 aa9.71□□□□□ -0.86
LDHA-219ENST00000541097 BRD4O60885 1362 aaPredicted RBP9.71□□□□□ -0.86
LDHA-219ENST00000541097 HAP1P54257 671 aaPredicted RBP9.7□□□□□ -0.86
LDHA-219ENST00000541097 PUS7Q96PZ0 661 aaKnown RBP9.7□□□□□ -0.86
LDHA-219ENST00000541097 CARD11Q9BXL7 1154 aa9.7□□□□□ -0.86
LDHA-219ENST00000541097 TONSLQ96HA7 1378 aa9.69□□□□□ -0.86
LDHA-219ENST00000541097 CLSPNQ9HAW4 1339 aa9.69□□□□□ -0.86
LDHA-219ENST00000541097 SBNO2Q9Y2G9 1366 aa9.69□□□□□ -0.86
LDHA-219ENST00000541097 SLC24A1O60721 1099 aa9.68□□□□□ -0.86
LDHA-219ENST00000541097 ABTB2Q8N961 1025 aa9.68□□□□□ -0.86
LDHA-219ENST00000541097 ARHGEF28Q8N1W1 1705 aaKnown RBP9.68□□□□□ -0.86
LDHA-219ENST00000541097 RGS12O14924 1447 aa9.67□□□□□ -0.86
LDHA-219ENST00000541097 PPIP5K1Q6PFW1 1433 aa9.67□□□□□ -0.86
LDHA-219ENST00000541097 SSH2Q76I76 1423 aa9.67□□□□□ -0.86
LDHA-219ENST00000541097 GCP02774 474 aa9.67□□□□□ -0.86
LDHA-219ENST00000541097 NLRP13Q86W25 1043 aa9.67□□□□□ -0.86
LDHA-219ENST00000541097 BTG4Q9NY30 223 aa9.67□□□□□ -0.86
LDHA-219ENST00000541097 USP19O94966 1318 aa9.66□□□□□ -0.86
LDHA-219ENST00000541097 TESK2Q96S53 571 aa9.66□□□□□ -0.86
LDHA-219ENST00000541097 RALGAPBQ86X10 1494 aa9.66□□□□□ -0.86
LDHA-219ENST00000541097 PLEKHG5O94827 1062 aa9.65□□□□□ -0.86
LDHA-219ENST00000541097 NUTM2GQ5VZR2 741 aa9.65□□□□□ -0.86
LDHA-219ENST00000541097 CCDC125Q86Z20 511 aa9.65□□□□□ -0.86
LDHA-219ENST00000541097 SEPT12Q8IYM1 358 aa9.65□□□□□ -0.86
LDHA-219ENST00000541097 SP7Q8TDD2 431 aaPredicted RBP9.65□□□□□ -0.86
LDHA-219ENST00000541097 PRDM11Q9NQV5 511 aa9.65□□□□□ -0.86
LDHA-219ENST00000541097 CPDO75976 1380 aa9.64□□□□□ -0.87
LDHA-219ENST00000541097 ATAD2Q6PL18 1390 aa9.64□□□□□ -0.87
LDHA-219ENST00000541097 TRPM1Q7Z4N2 1603 aa9.64□□□□□ -0.87
LDHA-219ENST00000541097 ST20-MTHFSA0A0A6YYL1 179 aa9.64□□□□□ -0.87
LDHA-219ENST00000541097 FXR2P51116 673 aaKnown RBP eCLIP9.64□□□□□ -0.872e-27■■□□□ 12
LDHA-219ENST00000541097 NLRP6P59044 892 aa9.64□□□□□ -0.87
LDHA-219ENST00000541097 ZC3H6P61129 1189 aaKnown RBP9.64□□□□□ -0.87
LDHA-219ENST00000541097 RGPD8O14715 1765 aaPredicted RBP9.64□□□□□ -0.87
LDHA-219ENST00000541097 TRPM3Q9HCF6 1732 aaPredicted RBP9.64□□□□□ -0.87
LDHA-219ENST00000541097 USP6P35125 1406 aa9.64□□□□□ -0.87
LDHA-219ENST00000541097 CPSF1Q10570 1443 aaKnown RBP9.64□□□□□ -0.87
LDHA-219ENST00000541097 KIAA0232Q92628 1395 aa9.63□□□□□ -0.87
LDHA-219ENST00000541097 SPATA31A5Q5VU36 1347 aa9.63□□□□□ -0.87
LDHA-219ENST00000541097 TTC21BQ7Z4L5 1316 aa9.63□□□□□ -0.87
LDHA-219ENST00000541097 SPATA31A7Q8IWB4 1347 aa9.63□□□□□ -0.87
LDHA-219ENST00000541097 PCGF6Q9BYE7 350 aa9.63□□□□□ -0.87
LDHA-219ENST00000541097 TTC21AQ8NDW8 1320 aa9.62□□□□□ -0.87
LDHA-219ENST00000541097 ALS2Q96Q42 1657 aa9.62□□□□□ -0.87
LDHA-219ENST00000541097 CHRNA2Q15822 529 aa9.62□□□□□ -0.87
LDHA-219ENST00000541097 SLC12A5Q9H2X9 1139 aa9.62□□□□□ -0.87
LDHA-219ENST00000541097 SPATA31A1Q5TZJ5 1347 aa9.61□□□□□ -0.87
LDHA-219ENST00000541097 ARHGEF25Q86VW2 580 aa9.61□□□□□ -0.87
LDHA-219ENST00000541097 KCNH5Q8NCM2 988 aa9.61□□□□□ -0.87
LDHA-219ENST00000541097 CCDC9Q9Y3X0 531 aaKnown RBP9.61□□□□□ -0.87
LDHA-219ENST00000541097 HAX1O00165 279 aa9.6□□□□□ -0.87
LDHA-219ENST00000541097 EVA1CP58658 441 aa9.6□□□□□ -0.87
LDHA-219ENST00000541097 FAM98CQ17RN3 349 aaKnown RBP9.6□□□□□ -0.87
LDHA-219ENST00000541097 BARGINQ6ZT62 677 aa9.6□□□□□ -0.87
LDHA-219ENST00000541097 KRT27Q7Z3Y8 459 aa9.6□□□□□ -0.87
LDHA-219ENST00000541097 AATKQ6ZMQ8 1374 aa9.6□□□□□ -0.87
LDHA-219ENST00000541097 TOPAZ1Q8N9V7 1692 aa9.59□□□□□ -0.87
LDHA-219ENST00000541097 LARP1Q6PKG0 1096 aaKnown RBP9.59□□□□□ -0.87
LDHA-219ENST00000541097 TERF2IPQ9NYB0 399 aa9.59□□□□□ -0.87
LDHA-219ENST00000541097 THRAP3Q9Y2W1 955 aaKnown RBP9.59□□□□□ -0.87
LDHA-219ENST00000541097 USP31Q70CQ4 1352 aa9.59□□□□□ -0.87
LDHA-219ENST00000541097 KTN1Q86UP2 1357 aaKnown RBP9.59□□□□□ -0.87
LDHA-219ENST00000541097 GLI3P10071 1580 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms