RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 SPATA31E1Q6ZUB1 1445 aa9.39□□□□□ -0.91
CLTCL1-206ENST00000540896 KDM5AP29375 1690 aaKnown RBP9.39□□□□□ -0.91
CLTCL1-206ENST00000540896 RPGRIP1LQ68CZ1 1315 aa9.39□□□□□ -0.91
CLTCL1-206ENST00000540896 PPP1R37O75864 691 aa9.39□□□□□ -0.91
CLTCL1-206ENST00000540896 ANKLE2Q86XL3 938 aa9.39□□□□□ -0.91
CLTCL1-206ENST00000540896 KIF1BO60333 1816 aa9.39□□□□□ -0.91
CLTCL1-206ENST00000540896 TMEM2Q9UHN6 1383 aa9.38□□□□□ -0.91
CLTCL1-206ENST00000540896 MYO5BQ9ULV0 1848 aa9.38□□□□□ -0.91
CLTCL1-206ENST00000540896 NCKAP5LQ9HCH0 1330 aa9.38□□□□□ -0.91
CLTCL1-206ENST00000540896 HDGFP51858 240 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-206ENST00000540896 TXNDC2Q86VQ3 553 aa9.38□□□□□ -0.91
CLTCL1-206ENST00000540896 RTN4Q9NQC3 1192 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-206ENST00000540896 PCDHGA4Q9Y5G9 962 aa9.38□□□□□ -0.91
CLTCL1-206ENST00000540896 EID1Q9Y6B2 187 aa9.38□□□□□ -0.91
CLTCL1-206ENST00000540896 PSDA5PKW4 1024 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-206ENST00000540896 LTKP29376 864 aa9.37□□□□□ -0.91
CLTCL1-206ENST00000540896 PBX2P40425 430 aa9.37□□□□□ -0.91
CLTCL1-206ENST00000540896 NUTM2DQ5VT03 806 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-206ENST00000540896 SLIT1O75093 1534 aa9.36□□□□□ -0.91
CLTCL1-206ENST00000540896 ARHGAP23Q9P227 1491 aa9.36□□□□□ -0.91
CLTCL1-206ENST00000540896 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.36□□□□□ -0.91
CLTCL1-206ENST00000540896 KHSRPQ92945 711 aaKnown RBP eCLIP9.36□□□□□ -0.91
CLTCL1-206ENST00000540896 RIMS2Q9UQ26 1411 aa9.36□□□□□ -0.91
CLTCL1-206ENST00000540896 STRCQ7RTU9 1775 aa9.35□□□□□ -0.91
CLTCL1-206ENST00000540896 TBC1D12O60347 775 aa9.35□□□□□ -0.91
CLTCL1-206ENST00000540896 NUDT7P0C024 238 aa9.35□□□□□ -0.91
CLTCL1-206ENST00000540896 BCANQ96GW7 911 aa9.35□□□□□ -0.91
CLTCL1-206ENST00000540896 CARD11Q9BXL7 1154 aa9.35□□□□□ -0.91
CLTCL1-206ENST00000540896 GPHNQ9NQX3 736 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-206ENST00000540896 SCAF11Q99590 1463 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-206ENST00000540896 ZFYVE9O95405 1425 aa9.34□□□□□ -0.91
CLTCL1-206ENST00000540896 PRAG1Q86YV5 1406 aa9.34□□□□□ -0.91
CLTCL1-206ENST00000540896 EIF4G2P78344 907 aaKnown RBP eCLIP9.34□□□□□ -0.91
CLTCL1-206ENST00000540896 FOXK1P85037 733 aa9.34□□□□□ -0.91
CLTCL1-206ENST00000540896 ROCK2O75116 1388 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-206ENST00000540896 ADGRF5Q8IZF2 1346 aa9.33□□□□□ -0.92
CLTCL1-206ENST00000540896 NEURL4Q96JN8 1562 aa9.33□□□□□ -0.92
CLTCL1-206ENST00000540896 SLC24A1O60721 1099 aa9.33□□□□□ -0.92
CLTCL1-206ENST00000540896 PTCD2Q8WV60 388 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-206ENST00000540896 RNF166Q96A37 237 aaPredicted RBP9.33□□□□□ -0.92
CLTCL1-206ENST00000540896 HIRIP3Q9BW71 556 aaPredicted RBP9.33□□□□□ -0.92
CLTCL1-206ENST00000540896 POLR1AO95602 1720 aaPredicted RBP9.33□□□□□ -0.92
CLTCL1-206ENST00000540896 NPHP4O75161 1426 aaPredicted RBP9.32□□□□□ -0.92
CLTCL1-206ENST00000540896 NEXMIFQ5QGS0 1516 aa9.32□□□□□ -0.92
CLTCL1-206ENST00000540896 NBPF1Q3BBV0 1214 aa9.32□□□□□ -0.92
CLTCL1-206ENST00000540896 ANKRD13DQ6ZTN6 518 aa9.32□□□□□ -0.92
CLTCL1-206ENST00000540896 LHX6Q9UPM6 363 aa9.32□□□□□ -0.92
CLTCL1-206ENST00000540896 MED14O60244 1454 aa9.32□□□□□ -0.92
CLTCL1-206ENST00000540896 HSPA5P11021 654 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-206ENST00000540896 CFAP70Q5T0N1 1121 aa9.31□□□□□ -0.92
CLTCL1-206ENST00000540896 PLPP6Q8IY26 295 aa9.31□□□□□ -0.92
CLTCL1-206ENST00000540896 PPLO60437 1756 aa9.3□□□□□ -0.92
CLTCL1-206ENST00000540896 IQGAP1P46940 1657 aa9.3□□□□□ -0.92
CLTCL1-206ENST00000540896 MYOM2P54296 1465 aa9.3□□□□□ -0.92
CLTCL1-206ENST00000540896 PLEKHG1Q9ULL1 1385 aa9.3□□□□□ -0.92
CLTCL1-206ENST00000540896 LSM11P83369 360 aaKnown RBP eCLIP9.3□□□□□ -0.92
CLTCL1-206ENST00000540896 SLC26A8Q96RN1 970 aa9.3□□□□□ -0.92
CLTCL1-206ENST00000540896 RALGAPBQ86X10 1494 aa9.29□□□□□ -0.92
CLTCL1-206ENST00000540896 C14orf93Q9H972 538 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-206ENST00000540896 IFT172Q9UG01 1749 aa9.28□□□□□ -0.92
CLTCL1-206ENST00000540896 TMEM132EQ6IEE7 984 aa9.28□□□□□ -0.92
CLTCL1-206ENST00000540896 USP47Q96K76 1375 aa9.27□□□□□ -0.93
CLTCL1-206ENST00000540896 TBX22Q9Y458 520 aa9.27□□□□□ -0.93
CLTCL1-206ENST00000540896 SETBP1Q9Y6X0 1596 aa9.26□□□□□ -0.93
CLTCL1-206ENST00000540896 PIK3C2GO75747 1445 aa9.26□□□□□ -0.93
CLTCL1-206ENST00000540896 ADAMTS13Q76LX8 1427 aa9.26□□□□□ -0.93
CLTCL1-206ENST00000540896 ST20-MTHFSA0A0A6YYL1 179 aa9.26□□□□□ -0.93
CLTCL1-206ENST00000540896 STK26Q9P289 416 aa9.26□□□□□ -0.93
CLTCL1-206ENST00000540896 NRXN1Q9ULB1 1477 aa9.26□□□□□ -0.93
CLTCL1-206ENST00000540896 GPRASP1Q5JY77 1395 aa9.25□□□□□ -0.93
CLTCL1-206ENST00000540896 NRXN3Q9Y4C0 1643 aa9.25□□□□□ -0.93
CLTCL1-206ENST00000540896 DSG2Q14126 1118 aa9.25□□□□□ -0.93
CLTCL1-206ENST00000540896 NKX1-1Q15270 411 aaPredicted RBP9.25□□□□□ -0.93
CLTCL1-206ENST00000540896 POLR3GLQ9BT43 218 aa9.25□□□□□ -0.93
CLTCL1-206ENST00000540896 TRAK1Q9UPV9 953 aa9.25□□□□□ -0.93
CLTCL1-206ENST00000540896 ZNF335Q9H4Z2 1342 aaPredicted RBP9.25□□□□□ -0.93
CLTCL1-206ENST00000540896 TRPM1Q7Z4N2 1603 aa9.24□□□□□ -0.93
CLTCL1-206ENST00000540896 ALKQ9UM73 1620 aa9.24□□□□□ -0.93
CLTCL1-206ENST00000540896 ARHGAP33O14559 1287 aa9.24□□□□□ -0.93
CLTCL1-206ENST00000540896 KCNA6P17658 529 aa9.24□□□□□ -0.93
CLTCL1-206ENST00000540896 PDE4AP27815 886 aa9.24□□□□□ -0.93
CLTCL1-206ENST00000540896 DIP2AQ14689 1571 aa9.24□□□□□ -0.93
CLTCL1-206ENST00000540896 EIF3AQ14152 1382 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-206ENST00000540896 AMOTL2Q9Y2J4 779 aa9.23□□□□□ -0.93
CLTCL1-206ENST00000540896 METP08581 1390 aa9.23□□□□□ -0.93
CLTCL1-206ENST00000540896 PPP4R3BQ5MIZ7 849 aa9.22□□□□□ -0.93
CLTCL1-206ENST00000540896 POGKQ9P215 609 aa9.22□□□□□ -0.93
CLTCL1-206ENST00000540896 PIK3R4Q99570 1358 aa9.22□□□□□ -0.93
CLTCL1-206ENST00000540896 TMF1P82094 1093 aa9.21□□□□□ -0.94
CLTCL1-206ENST00000540896 DDX10Q13206 875 aaKnown RBP9.21□□□□□ -0.94
CLTCL1-206ENST00000540896 DIEXFQ68CQ4 756 aaKnown RBP9.21□□□□□ -0.94
CLTCL1-206ENST00000540896 CENPJQ9HC77 1338 aaPredicted RBP9.21□□□□□ -0.94
CLTCL1-206ENST00000540896 CHD2O14647 1828 aaKnown RBP9.21□□□□□ -0.94
CLTCL1-206ENST00000540896 PTPRUQ92729 1446 aa9.21□□□□□ -0.94
CLTCL1-206ENST00000540896 SETD1AO15047 1707 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-206ENST00000540896 KIAA1210Q9ULL0 1709 aa9.2□□□□□ -0.94
CLTCL1-206ENST00000540896 STRCP1A6NGW2 1772 aa9.2□□□□□ -0.94
CLTCL1-206ENST00000540896 SAFB2Q14151 953 aaKnown RBP eCLIP9.2□□□□□ -0.94
CLTCL1-206ENST00000540896 PROSER2Q86WR7 435 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-206ENST00000540896 CRISPLD2Q9H0B8 497 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms