RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 POTEEQ6S8J3 1075 aa7.39□□□□□ -1.23
SNHG1-214ENST00000540865 RBM33Q96EV2 1170 aaKnown RBP7.39□□□□□ -1.23
SNHG1-214ENST00000540865 AXIN2Q9Y2T1 843 aa7.39□□□□□ -1.23
SNHG1-214ENST00000540865 ROBO1Q9Y6N7 1651 aa7.38□□□□□ -1.23
SNHG1-214ENST00000540865 PRDM15P57071 1507 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-214ENST00000540865 EHBP1L1Q8N3D4 1523 aa7.38□□□□□ -1.23
SNHG1-214ENST00000540865 CDK12Q9NYV4 1490 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-214ENST00000540865 PPP1R15BQ5SWA1 713 aa7.38□□□□□ -1.23
SNHG1-214ENST00000540865 SLC26A8Q96RN1 970 aa7.38□□□□□ -1.23
SNHG1-214ENST00000540865 SETD1AO15047 1707 aaKnown RBP7.38□□□□□ -1.23
SNHG1-214ENST00000540865 NKTRP30414 1462 aaKnown RBP7.37□□□□□ -1.23
SNHG1-214ENST00000540865 PBX2P40425 430 aa7.37□□□□□ -1.23
SNHG1-214ENST00000540865 UBR1Q8IWV7 1749 aa7.37□□□□□ -1.23
SNHG1-214ENST00000540865 ARHGEF5Q12774 1597 aa7.37□□□□□ -1.23
SNHG1-214ENST00000540865 FOXK1P85037 733 aa7.36□□□□□ -1.23
SNHG1-214ENST00000540865 IDI1Q13907 227 aa7.36□□□□□ -1.23
SNHG1-214ENST00000540865 PLPP6Q8IY26 295 aa7.36□□□□□ -1.23
SNHG1-214ENST00000540865 KCNV2Q8TDN2 545 aa7.36□□□□□ -1.23
SNHG1-214ENST00000540865 LRP6O75581 1613 aa7.36□□□□□ -1.23
SNHG1-214ENST00000540865 XIRP1Q702N8 1843 aaKnown RBP7.36□□□□□ -1.23
SNHG1-214ENST00000540865 NCOA3Q9Y6Q9 1424 aa7.35□□□□□ -1.23
SNHG1-214ENST00000540865 TET3O43151 1660 aa7.35□□□□□ -1.23
SNHG1-214ENST00000540865 LHX6Q9UPM6 363 aa7.35□□□□□ -1.23
SNHG1-214ENST00000540865 E2F4Q16254 413 aa7.34□□□□□ -1.23
SNHG1-214ENST00000540865 BCANQ96GW7 911 aa7.34□□□□□ -1.23
SNHG1-214ENST00000540865 HCSTQ9UBK5 93 aa7.34□□□□□ -1.23
SNHG1-214ENST00000540865 MROH1Q8NDA8 1641 aa7.34□□□□□ -1.24
SNHG1-214ENST00000540865 EIF2AK4Q9P2K8 1649 aaKnown RBP7.34□□□□□ -1.24
SNHG1-214ENST00000540865 NWD1Q149M9 1564 aa7.33□□□□□ -1.24
SNHG1-214ENST00000540865 AFF2P51816 1311 aa7.33□□□□□ -1.24
SNHG1-214ENST00000540865 EFCAB6Q5THR3 1501 aa7.33□□□□□ -1.24
SNHG1-214ENST00000540865 PHLPP1O60346 1717 aa7.33□□□□□ -1.24
SNHG1-214ENST00000540865 RBM6P78332 1123 aaKnown RBP7.33□□□□□ -1.24
SNHG1-214ENST00000540865 C19orf44Q9H6X5 657 aa7.33□□□□□ -1.24
SNHG1-214ENST00000540865 COL16A1Q07092 1604 aaPredicted RBP7.33□□□□□ -1.24
SNHG1-214ENST00000540865 MAST1Q9Y2H9 1570 aa7.33□□□□□ -1.24
SNHG1-214ENST00000540865 NUTM2BA6NNL0 878 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-214ENST00000540865 NUTM2EB1AL46 878 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-214ENST00000540865 ATF3P18847 181 aa7.32□□□□□ -1.24
SNHG1-214ENST00000540865 HDGFP51858 240 aaKnown RBP7.32□□□□□ -1.24
SNHG1-214ENST00000540865 NUTM2AQ8IVF1 878 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-214ENST00000540865 SLC52A1Q9NWF4 448 aa7.32□□□□□ -1.24
SNHG1-214ENST00000540865 TBX22Q9Y458 520 aa7.32□□□□□ -1.24
SNHG1-214ENST00000540865 KANK1Q14678 1352 aa7.32□□□□□ -1.24
SNHG1-214ENST00000540865 PLEKHG1Q9ULL1 1385 aa7.32□□□□□ -1.24
SNHG1-214ENST00000540865 DUOX2Q9NRD8 1548 aa7.32□□□□□ -1.24
SNHG1-214ENST00000540865 RGS12O14924 1447 aa7.31□□□□□ -1.24
SNHG1-214ENST00000540865 ADGRD1Q6QNK2 874 aa7.31□□□□□ -1.24
SNHG1-214ENST00000540865 BRINP3Q76B58 766 aa7.31□□□□□ -1.24
SNHG1-214ENST00000540865 C14orf37Q86TY3 774 aa7.31□□□□□ -1.24
SNHG1-214ENST00000540865 ERBINQ96RT1 1412 aa7.31□□□□□ -1.24
SNHG1-214ENST00000540865 QTRT2Q9H974 415 aaKnown RBP7.31□□□□□ -1.24
SNHG1-214ENST00000540865 EMILIN3Q9NT22 766 aa7.31□□□□□ -1.24
SNHG1-214ENST00000540865 PCDHGA4Q9Y5G9 962 aa7.31□□□□□ -1.24
SNHG1-214ENST00000540865 KIF15Q9NS87 1388 aa7.31□□□□□ -1.24
SNHG1-214ENST00000540865 PIK3C2BO00750 1634 aa7.3□□□□□ -1.24
SNHG1-214ENST00000540865 AHDC1Q5TGY3 1603 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-214ENST00000540865 CAMK2BQ13554 666 aa7.3□□□□□ -1.24
SNHG1-214ENST00000540865 NUTM2DQ5VT03 806 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-214ENST00000540865 NGLY1Q96IV0 654 aa7.3□□□□□ -1.24
SNHG1-214ENST00000540865 ATAD2Q6PL18 1390 aa7.3□□□□□ -1.24
SNHG1-214ENST00000540865 KDM5AP29375 1690 aaKnown RBP7.29□□□□□ -1.24
SNHG1-214ENST00000540865 NOS1P29475 1434 aa7.29□□□□□ -1.24
SNHG1-214ENST00000540865 MYOM3Q5VTT5 1437 aa7.29□□□□□ -1.24
SNHG1-214ENST00000540865 SETD5Q9C0A6 1442 aa7.29□□□□□ -1.24
SNHG1-214ENST00000540865 LMTK2Q8IWU2 1503 aa7.29□□□□□ -1.24
SNHG1-214ENST00000540865 PPP1R15AO75807 674 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-214ENST00000540865 LRRC59Q96AG4 307 aaKnown RBP7.29□□□□□ -1.24
SNHG1-214ENST00000540865 C8orf37Q96NL8 207 aa7.29□□□□□ -1.24
SNHG1-214ENST00000540865 RRP7BPQ9NSQ0 103 aa7.29□□□□□ -1.24
SNHG1-214ENST00000540865 ZFYVE9O95405 1425 aa7.28□□□□□ -1.24
SNHG1-214ENST00000540865 CCDC125Q86Z20 511 aa7.28□□□□□ -1.24
SNHG1-214ENST00000540865 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.28□□□□□ -1.246e-32■□□□□ 8.9
SNHG1-214ENST00000540865 PIK3R4Q99570 1358 aa7.28□□□□□ -1.24
SNHG1-214ENST00000540865 SHPRHQ149N8 1683 aa7.28□□□□□ -1.24
SNHG1-214ENST00000540865 ADGRB3O60242 1522 aa7.27□□□□□ -1.25
SNHG1-214ENST00000540865 CEP152O94986 1710 aa7.27□□□□□ -1.25
SNHG1-214ENST00000540865 DPYSL4O14531 572 aa7.27□□□□□ -1.25
SNHG1-214ENST00000540865 DIP2AQ14689 1571 aa7.27□□□□□ -1.25
SNHG1-214ENST00000540865 RIMS2Q9UQ26 1411 aa7.27□□□□□ -1.25
SNHG1-214ENST00000540865 EP400Q96L91 3159 aa7.26□□□□□ -1.25
SNHG1-214ENST00000540865 ARHGAP33O14559 1287 aa7.26□□□□□ -1.25
SNHG1-214ENST00000540865 SLC34A2O95436 690 aa7.26□□□□□ -1.25
SNHG1-214ENST00000540865 DCCP43146 1447 aa7.26□□□□□ -1.25
SNHG1-214ENST00000540865 PNPLA6Q8IY17 1366 aa7.25□□□□□ -1.25
SNHG1-214ENST00000540865 DMRTA1Q5VZB9 504 aa7.25□□□□□ -1.25
SNHG1-214ENST00000540865 ARHGEF1Q92888 912 aaKnown RBP7.25□□□□□ -1.25
SNHG1-214ENST00000540865 TRPC5Q9UL62 973 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-214ENST00000540865 AMOTL2Q9Y2J4 779 aa7.25□□□□□ -1.25
SNHG1-214ENST00000540865 ABCC5O15440 1437 aa7.25□□□□□ -1.25
SNHG1-214ENST00000540865 ADAMTS13Q76LX8 1427 aa7.25□□□□□ -1.25
SNHG1-214ENST00000540865 CFAP65Q6ZU64 1925 aaKnown RBP7.25□□□□□ -1.25
SNHG1-214ENST00000540865 ASXL1Q8IXJ9 1541 aa7.24□□□□□ -1.25
SNHG1-214ENST00000540865 PSEN2P49810 448 aa7.24□□□□□ -1.25
SNHG1-214ENST00000540865 FNBP4Q8N3X1 1017 aaPredicted RBP7.24□□□□□ -1.25
SNHG1-214ENST00000540865 OXER1Q8TDS5 423 aa7.24□□□□□ -1.25
SNHG1-214ENST00000540865 KCTD12Q96CX2 325 aaKnown RBP7.24□□□□□ -1.25
SNHG1-214ENST00000540865 USP21Q9UK80 565 aa7.24□□□□□ -1.25
SNHG1-214ENST00000540865 RPRD2Q5VT52 1461 aaKnown RBP7.24□□□□□ -1.25
SNHG1-214ENST00000540865 ANKRD30AQ9BXX3 1397 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms