RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 C1QTNF8P60827 252 aa16.6■□□□□ 0.25
TMEM258-205ENST00000540434 NEUROD1Q13562 356 aa16.6■□□□□ 0.25
TMEM258-205ENST00000540434 KNDC1Q76NI1 1749 aa16.59■□□□□ 0.25
TMEM258-205ENST00000540434 KCNQ2O43526 872 aa16.59■□□□□ 0.25
TMEM258-205ENST00000540434 SPON1Q9HCB6 807 aa16.59■□□□□ 0.25
TMEM258-205ENST00000540434 ABCC11Q96J66 1382 aa16.58■□□□□ 0.24
TMEM258-205ENST00000540434 NUP188Q5SRE5 1749 aa16.58■□□□□ 0.24
TMEM258-205ENST00000540434 RREB1Q92766 1687 aa16.57■□□□□ 0.24
TMEM258-205ENST00000540434 NINLQ9Y2I6 1382 aa16.57■□□□□ 0.24
TMEM258-205ENST00000540434 L3MBTL2Q969R5 705 aa16.57■□□□□ 0.24
TMEM258-205ENST00000540434 THSD7AQ9UPZ6 1657 aa16.56■□□□□ 0.24
TMEM258-205ENST00000540434 SPATA31A5Q5VU36 1347 aa16.56■□□□□ 0.24
TMEM258-205ENST00000540434 SPATA31A7Q8IWB4 1347 aa16.56■□□□□ 0.24
TMEM258-205ENST00000540434 ADGRB2O60241 1585 aa16.55■□□□□ 0.24
TMEM258-205ENST00000540434 SBNO1A3KN83 1393 aa16.55■□□□□ 0.24
TMEM258-205ENST00000540434 PSME1Q06323 249 aa16.55■□□□□ 0.24
TMEM258-205ENST00000540434 NBPF8Q3BBV2 869 aa16.55■□□□□ 0.24
TMEM258-205ENST00000540434 NBPF14Q5TI25 921 aa16.55■□□□□ 0.24
TMEM258-205ENST00000540434 PHF8Q9UPP1 1060 aa16.55■□□□□ 0.24
TMEM258-205ENST00000540434 ADGRB1O14514 1584 aa16.53■□□□□ 0.24
TMEM258-205ENST00000540434 YTHDC2Q9H6S0 1430 aaKnown RBP16.53■□□□□ 0.24
TMEM258-205ENST00000540434 NBPF1Q3BBV0 1214 aa16.52■□□□□ 0.24
TMEM258-205ENST00000540434 FAM196AQ6ZSG2 479 aa16.52■□□□□ 0.24
TMEM258-205ENST00000540434 ARHGEF10O15013 1369 aa16.51■□□□□ 0.23
TMEM258-205ENST00000540434 PDGFDQ9GZP0 370 aaPredicted RBP16.51■□□□□ 0.23
TMEM258-205ENST00000540434 COL14A1Q05707 1796 aaKnown RBP16.51■□□□□ 0.23
TMEM258-205ENST00000540434 PARD3Q8TEW0 1356 aa16.51■□□□□ 0.23
TMEM258-205ENST00000540434 TRPM3Q9HCF6 1732 aaPredicted RBP16.5■□□□□ 0.23
TMEM258-205ENST00000540434 PMFBP1Q8TBY8 1022 aa16.5■□□□□ 0.23
TMEM258-205ENST00000540434 SIRT1Q96EB6 747 aa16.5■□□□□ 0.23
TMEM258-205ENST00000540434 NRKQ7Z2Y5 1582 aa16.5■□□□□ 0.23
TMEM258-205ENST00000540434 ALS2Q96Q42 1657 aa16.49■□□□□ 0.23
TMEM258-205ENST00000540434 CEP350Q5VT06 3117 aa16.48■□□□□ 0.23
TMEM258-205ENST00000540434 STAC3Q96MF2 364 aa16.47■□□□□ 0.23
TMEM258-205ENST00000540434 TRAK1Q9UPV9 953 aa16.47■□□□□ 0.23
TMEM258-205ENST00000540434 CRYBG1Q9Y4K1 1723 aa16.47■□□□□ 0.23
TMEM258-205ENST00000540434 SPATA31A1Q5TZJ5 1347 aa16.46■□□□□ 0.23
TMEM258-205ENST00000540434 ZBTB7AO95365 584 aa16.46■□□□□ 0.23
TMEM258-205ENST00000540434 SAFB2Q14151 953 aaKnown RBP eCLIP16.46■□□□□ 0.23
TMEM258-205ENST00000540434 ANO8Q9HCE9 1232 aaPredicted RBP16.46■□□□□ 0.23
TMEM258-205ENST00000540434 STRN4Q9NRL3 753 aa16.46■□□□□ 0.23
TMEM258-205ENST00000540434 USP35Q9P2H5 1018 aa16.46■□□□□ 0.23
TMEM258-205ENST00000540434 PRAM1Q96QH2 718 aa16.45■□□□□ 0.22
TMEM258-205ENST00000540434 MYOM1P52179 1685 aa16.45■□□□□ 0.22
TMEM258-205ENST00000540434 CHRNA2Q15822 529 aa16.44■□□□□ 0.22
TMEM258-205ENST00000540434 ATF5Q9Y2D1 282 aaPredicted RBP16.43■□□□□ 0.22
TMEM258-205ENST00000540434 PTGER2P43116 358 aa16.42■□□□□ 0.22
TMEM258-205ENST00000540434 KIAA1210Q9ULL0 1709 aa16.42■□□□□ 0.22
TMEM258-205ENST00000540434 CASZ1Q86V15 1759 aa16.41■□□□□ 0.22
TMEM258-205ENST00000540434 PDE3BQ13370 1112 aa16.41■□□□□ 0.22
TMEM258-205ENST00000540434 FHDC1Q9C0D6 1143 aaPredicted RBP16.41■□□□□ 0.22
TMEM258-205ENST00000540434 PRDM11Q9NQV5 511 aa16.41■□□□□ 0.22
TMEM258-205ENST00000540434 DLC1Q96QB1 1528 aa16.4■□□□□ 0.22
TMEM258-205ENST00000540434 ANKARQ7Z5J8 1434 aa16.4■□□□□ 0.22
TMEM258-205ENST00000540434 SYT17Q9BSW7 474 aa16.4■□□□□ 0.22
TMEM258-205ENST00000540434 CHD4Q14839 1912 aa16.39■□□□□ 0.21
TMEM258-205ENST00000540434 TRPM1Q7Z4N2 1603 aa16.39■□□□□ 0.21
TMEM258-205ENST00000540434 HIRIP3Q9BW71 556 aaPredicted RBP16.39■□□□□ 0.21
TMEM258-205ENST00000540434 ARHGEF28Q8N1W1 1705 aaKnown RBP16.39■□□□□ 0.21
TMEM258-205ENST00000540434 GIGYF1O75420 1035 aaPredicted RBP16.38■□□□□ 0.21
TMEM258-205ENST00000540434 KIAA0232Q92628 1395 aa16.38■□□□□ 0.21
TMEM258-205ENST00000540434 PTF1AQ7RTS3 328 aa16.37■□□□□ 0.21
TMEM258-205ENST00000540434 POGKQ9P215 609 aa16.37■□□□□ 0.21
TMEM258-205ENST00000540434 MINK1Q8N4C8 1332 aaPredicted RBP16.37■□□□□ 0.21
TMEM258-205ENST00000540434 PRR36Q9H6K5 1346 aa16.36■□□□□ 0.21
TMEM258-205ENST00000540434 TONSLQ96HA7 1378 aa16.36■□□□□ 0.21
TMEM258-205ENST00000540434 ZC3H6P61129 1189 aaKnown RBP16.35■□□□□ 0.21
TMEM258-205ENST00000540434 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
TMEM258-205ENST00000540434 GPRASP1Q5JY77 1395 aa16.34■□□□□ 0.21
TMEM258-205ENST00000540434 LARP1Q6PKG0 1096 aaKnown RBP16.33■□□□□ 0.2
TMEM258-205ENST00000540434 BARGINQ6ZT62 677 aa16.33■□□□□ 0.2
TMEM258-205ENST00000540434 BCL11BQ9C0K0 894 aaPredicted RBP16.33■□□□□ 0.2
TMEM258-205ENST00000540434 NUTM2GQ5VZR2 741 aa16.32■□□□□ 0.2
TMEM258-205ENST00000540434 PROM2Q8N271 834 aa16.32■□□□□ 0.2
TMEM258-205ENST00000540434 CCER1Q8TC90 406 aaPredicted RBP16.32■□□□□ 0.2
TMEM258-205ENST00000540434 PHRF1Q9P1Y6 1649 aaKnown RBP16.32■□□□□ 0.2
TMEM258-205ENST00000540434 EVA1CP58658 441 aa16.31■□□□□ 0.2
TMEM258-205ENST00000540434 SBF2Q86WG5 1849 aa16.31■□□□□ 0.2
TMEM258-205ENST00000540434 SSH2Q76I76 1423 aa16.3■□□□□ 0.2
TMEM258-205ENST00000540434 ROCK2O75116 1388 aaKnown RBP16.29■□□□□ 0.2
TMEM258-205ENST00000540434 WASLO00401 505 aaPredicted RBP16.29■□□□□ 0.2
TMEM258-205ENST00000540434 TULP4Q9NRJ4 1543 aa16.29■□□□□ 0.2
TMEM258-205ENST00000540434 PLSCR1O15162 318 aa16.28■□□□□ 0.2
TMEM258-205ENST00000540434 TCP11L2Q8N4U5 519 aa16.28■□□□□ 0.2
TMEM258-205ENST00000540434 SGIP1Q9BQI5 828 aa16.28■□□□□ 0.2
TMEM258-205ENST00000540434 CLSPNQ9HAW4 1339 aa16.27■□□□□ 0.2
TMEM258-205ENST00000540434 GPR162Q16538 588 aa16.27■□□□□ 0.2
TMEM258-205ENST00000540434 NGDNQ8NEJ9 315 aaKnown RBP16.27■□□□□ 0.2
TMEM258-205ENST00000540434 CDK19Q9BWU1 502 aa16.27■□□□□ 0.2
TMEM258-205ENST00000540434 RGPD3A6NKT7 1758 aaPredicted RBP16.27■□□□□ 0.2
TMEM258-205ENST00000540434 RGPD4Q7Z3J3 1758 aa16.27■□□□□ 0.2
TMEM258-205ENST00000540434 CENPJQ9HC77 1338 aaPredicted RBP16.26■□□□□ 0.19
TMEM258-205ENST00000540434 PEAK1Q9H792 1746 aa16.26■□□□□ 0.19
TMEM258-205ENST00000540434 PARP4Q9UKK3 1724 aaKnown RBP16.26■□□□□ 0.19
TMEM258-205ENST00000540434 SHANK3Q9BYB0 1731 aa16.25■□□□□ 0.19
TMEM258-205ENST00000540434 LMO7Q8WWI1 1683 aa16.25■□□□□ 0.19
TMEM258-205ENST00000540434 QRICH2Q9H0J4 1663 aa16.25■□□□□ 0.19
TMEM258-205ENST00000540434 EIF3AQ14152 1382 aaKnown RBP16.25■□□□□ 0.19
TMEM258-205ENST00000540434 PELP1Q8IZL8 1130 aaKnown RBP16.24■□□□□ 0.19
TMEM258-205ENST00000540434 ARXQ96QS3 562 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms