RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 COL22A1Q8NFW1 1626 aaPredicted RBP12.28□□□□□ -0.44
LDHA-218ENST00000540430 ADAMTS2O95450 1211 aa12.27□□□□□ -0.44
LDHA-218ENST00000540430 RBM6P78332 1123 aaKnown RBP12.27□□□□□ -0.44
LDHA-218ENST00000540430 NFKBIBQ15653 356 aa12.27□□□□□ -0.44
LDHA-218ENST00000540430 GLIPR1L2Q4G1C9 344 aa12.27□□□□□ -0.44
LDHA-218ENST00000540430 TMEM132EQ6IEE7 984 aa12.27□□□□□ -0.44
LDHA-218ENST00000540430 NGLY1Q96IV0 654 aa12.27□□□□□ -0.44
LDHA-218ENST00000540430 QTRT2Q9H974 415 aaKnown RBP12.27□□□□□ -0.44
LDHA-218ENST00000540430 YTHDC2Q9H6S0 1430 aaKnown RBP12.27□□□□□ -0.44
LDHA-218ENST00000540430 PNISRQ8TF01 805 aaKnown RBP12.27□□□□□ -0.45
LDHA-218ENST00000540430 PXDNQ92626 1479 aa12.26□□□□□ -0.45
LDHA-218ENST00000540430 NRXN1Q9ULB1 1477 aa12.26□□□□□ -0.45
LDHA-218ENST00000540430 SIRT1Q96EB6 747 aa12.26□□□□□ -0.45
LDHA-218ENST00000540430 PODXL2Q9NZ53 605 aa12.26□□□□□ -0.45
LDHA-218ENST00000540430 PLEKHH1Q9ULM0 1364 aa12.26□□□□□ -0.45
LDHA-218ENST00000540430 MYOM2P54296 1465 aa12.25□□□□□ -0.45
LDHA-218ENST00000540430 C14orf93Q9H972 538 aaKnown RBP12.25□□□□□ -0.45
LDHA-218ENST00000540430 KTN1Q86UP2 1357 aaKnown RBP12.25□□□□□ -0.45
LDHA-218ENST00000540430 FOXO3O43524 673 aa12.25□□□□□ -0.45
LDHA-218ENST00000540430 RGS12O14924 1447 aa12.24□□□□□ -0.45
LDHA-218ENST00000540430 FMN2Q9NZ56 1722 aa12.24□□□□□ -0.45
LDHA-218ENST00000540430 FRAT1Q92837 279 aaPredicted RBP12.24□□□□□ -0.45
LDHA-218ENST00000540430 ROCK2O75116 1388 aaKnown RBP12.24□□□□□ -0.45
LDHA-218ENST00000540430 PLEKHG5O94827 1062 aa12.23□□□□□ -0.45
LDHA-218ENST00000540430 FNBP4Q8N3X1 1017 aaPredicted RBP12.23□□□□□ -0.45
LDHA-218ENST00000540430 EXOC6Q8TAG9 804 aa12.23□□□□□ -0.45
LDHA-218ENST00000540430 ZMYND15Q9H091 742 aa12.23□□□□□ -0.45
LDHA-218ENST00000540430 NUTM2FA1L443 756 aa12.23□□□□□ -0.45
LDHA-218ENST00000540430 PDE3BQ13370 1112 aa12.23□□□□□ -0.45
LDHA-218ENST00000540430 NBPF8Q3BBV2 869 aa12.23□□□□□ -0.45
LDHA-218ENST00000540430 USP21Q9UK80 565 aa12.23□□□□□ -0.45
LDHA-218ENST00000540430 KIF1AQ12756 1690 aa12.22□□□□□ -0.45
LDHA-218ENST00000540430 XPCQ01831 940 aaPredicted RBP12.22□□□□□ -0.45
LDHA-218ENST00000540430 CFAP70Q5T0N1 1121 aa12.22□□□□□ -0.45
LDHA-218ENST00000540430 TRPC5Q9UL62 973 aaPredicted RBP12.22□□□□□ -0.45
LDHA-218ENST00000540430 BRD4O60885 1362 aaPredicted RBP12.21□□□□□ -0.45
LDHA-218ENST00000540430 RCAN3Q9UKA8 241 aa12.21□□□□□ -0.45
LDHA-218ENST00000540430 MARF1Q9Y4F3 1742 aaKnown RBP12.2□□□□□ -0.46
LDHA-218ENST00000540430 ATRNO75882 1429 aa12.2□□□□□ -0.46
LDHA-218ENST00000540430 TMC1Q8TDI8 760 aa12.2□□□□□ -0.46
LDHA-218ENST00000540430 DLC1Q96QB1 1528 aa12.19□□□□□ -0.46
LDHA-218ENST00000540430 SPATA31A3Q5VYP0 1347 aa12.19□□□□□ -0.46
LDHA-218ENST00000540430 PRAM1Q96QH2 718 aa12.19□□□□□ -0.46
LDHA-218ENST00000540430 BCL9LQ86UU0 1499 aa12.18□□□□□ -0.46
LDHA-218ENST00000540430 RGPD8O14715 1765 aaPredicted RBP12.18□□□□□ -0.46
LDHA-218ENST00000540430 KRT28Q7Z3Y7 464 aa12.17□□□□□ -0.46
LDHA-218ENST00000540430 PHF8Q9UPP1 1060 aa12.17□□□□□ -0.46
LDHA-218ENST00000540430 ATAD2Q6PL18 1390 aa12.17□□□□□ -0.46
LDHA-218ENST00000540430 ADGRB1O14514 1584 aa12.17□□□□□ -0.46
LDHA-218ENST00000540430 INSRP06213 1382 aa12.16□□□□□ -0.46
LDHA-218ENST00000540430 PSME1Q06323 249 aa12.16□□□□□ -0.46
LDHA-218ENST00000540430 STAC3Q96MF2 364 aa12.16□□□□□ -0.46
LDHA-218ENST00000540430 POGKQ9P215 609 aa12.16□□□□□ -0.46
LDHA-218ENST00000540430 TNS3Q68CZ2 1445 aa12.16□□□□□ -0.46
LDHA-218ENST00000540430 ANKARQ7Z5J8 1434 aa12.16□□□□□ -0.46
LDHA-218ENST00000540430 EP400Q96L91 3159 aa12.16□□□□□ -0.46
LDHA-218ENST00000540430 SAFB2Q14151 953 aaKnown RBP eCLIP12.16□□□□□ -0.46
LDHA-218ENST00000540430 RALBP1Q15311 655 aa12.16□□□□□ -0.46
LDHA-218ENST00000540430 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.16□□□□□ -0.46
LDHA-218ENST00000540430 ADGRB2O60241 1585 aa12.15□□□□□ -0.46
LDHA-218ENST00000540430 MYBBP1AQ9BQG0 1328 aaKnown RBP12.15□□□□□ -0.46
LDHA-218ENST00000540430 USP47Q96K76 1375 aa12.15□□□□□ -0.46
LDHA-218ENST00000540430 VSIG10Q8N0Z9 540 aa12.15□□□□□ -0.46
LDHA-218ENST00000540430 USP32Q8NFA0 1604 aa12.15□□□□□ -0.46
LDHA-218ENST00000540430 SBNO1A3KN83 1393 aa12.14□□□□□ -0.47
LDHA-218ENST00000540430 DCAF11Q8TEB1 546 aa12.14□□□□□ -0.47
LDHA-218ENST00000540430 GJD4Q96KN9 370 aaPredicted RBP12.14□□□□□ -0.47
LDHA-218ENST00000540430 SLIT2O94813 1529 aa12.14□□□□□ -0.47
LDHA-218ENST00000540430 UNC5CLQ8IV45 518 aa12.14□□□□□ -0.47
LDHA-218ENST00000540430 TRAK1Q9UPV9 953 aa12.13□□□□□ -0.47
LDHA-218ENST00000540430 KDM2AQ9Y2K7 1162 aa12.13□□□□□ -0.47
LDHA-218ENST00000540430 ARHGEF10O15013 1369 aa12.13□□□□□ -0.47
LDHA-218ENST00000540430 EIF3AQ14152 1382 aaKnown RBP12.12□□□□□ -0.47
LDHA-218ENST00000540430 HAP1P54257 671 aaPredicted RBP12.12□□□□□ -0.47
LDHA-218ENST00000540430 FAM161AQ3B820 660 aa12.11□□□□□ -0.47
LDHA-218ENST00000540430 RALGAPBQ86X10 1494 aa12.11□□□□□ -0.47
LDHA-218ENST00000540430 KDM2BQ8NHM5 1336 aa12.11□□□□□ -0.47
LDHA-218ENST00000540430 PMFBP1Q8TBY8 1022 aa12.1□□□□□ -0.47
LDHA-218ENST00000540430 MINK1Q8N4C8 1332 aaPredicted RBP12.1□□□□□ -0.47
LDHA-218ENST00000540430 TULP4Q9NRJ4 1543 aa12.1□□□□□ -0.47
LDHA-218ENST00000540430 ABCA3Q99758 1704 aa12.1□□□□□ -0.47
LDHA-218ENST00000540430 FRAT2O75474 233 aaPredicted RBP12.1□□□□□ -0.47
LDHA-218ENST00000540430 LMOD2Q6P5Q4 547 aa12.1□□□□□ -0.47
LDHA-218ENST00000540430 CABLES1Q8TDN4 633 aa12.1□□□□□ -0.47
LDHA-218ENST00000540430 GLI3P10071 1580 aa12.1□□□□□ -0.47
LDHA-218ENST00000540430 SRCAPQ6ZRS2 3230 aa12.09□□□□□ -0.47
LDHA-218ENST00000540430 WASLO00401 505 aaPredicted RBP12.09□□□□□ -0.47
LDHA-218ENST00000540430 CENPQQ7L2Z9 268 aaPredicted RBP12.09□□□□□ -0.47
LDHA-218ENST00000540430 CCDC125Q86Z20 511 aa12.09□□□□□ -0.47
LDHA-218ENST00000540430 NWD2Q9ULI1 1742 aa12.09□□□□□ -0.47
LDHA-218ENST00000540430 GPRASP1Q5JY77 1395 aa12.09□□□□□ -0.47
LDHA-218ENST00000540430 L1TD1Q5T7N2 865 aaKnown RBP12.09□□□□□ -0.47
LDHA-218ENST00000540430 TRPM3Q9HCF6 1732 aaPredicted RBP12.08□□□□□ -0.48
LDHA-218ENST00000540430 PLCH1Q4KWH8 1693 aa12.08□□□□□ -0.48
LDHA-218ENST00000540430 PRR36Q9H6K5 1346 aa12.08□□□□□ -0.48
LDHA-218ENST00000540430 VPS72Q15906 364 aa12.08□□□□□ -0.48
LDHA-218ENST00000540430 C8orf34Q49A92 452 aa12.08□□□□□ -0.48
LDHA-218ENST00000540430 ARHGEF28Q8N1W1 1705 aaKnown RBP12.07□□□□□ -0.48
LDHA-218ENST00000540430 NLRP13Q86W25 1043 aa12.07□□□□□ -0.48
LDHA-218ENST00000540430 ALS2Q96Q42 1657 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms