RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 E9PSI1 815 aa7.61□□□□□ -1.19
PTPRD-214ENST00000540109 CHMP4AQ9BY43 222 aa7.61□□□□□ -1.19
PTPRD-214ENST00000540109 RCAN3Q9UKA8 241 aa7.61□□□□□ -1.19
PTPRD-214ENST00000540109 AAMPQ13685 434 aa7.61□□□□□ -1.19
PTPRD-214ENST00000540109 YTHDC2Q9H6S0 1430 aaKnown RBP7.61□□□□□ -1.19
PTPRD-214ENST00000540109 TPM2P07951 284 aa7.61□□□□□ -1.19
PTPRD-214ENST00000540109 STAG3Q9UJ98 1225 aa7.61□□□□□ -1.19
PTPRD-214ENST00000540109 KNDC1Q76NI1 1749 aa7.6□□□□□ -1.19
PTPRD-214ENST00000540109 IDI1Q13907 227 aa7.6□□□□□ -1.19
PTPRD-214ENST00000540109 NSD3Q9BZ95 1437 aa7.6□□□□□ -1.19
PTPRD-214ENST00000540109 RRP1P56182 461 aaKnown RBP7.6□□□□□ -1.19
PTPRD-214ENST00000540109 NLRP1Q9C000 1473 aa7.6□□□□□ -1.19
PTPRD-214ENST00000540109 KIF13AQ9H1H9 1805 aa7.6□□□□□ -1.19
PTPRD-214ENST00000540109 ALKQ9UM73 1620 aa7.6□□□□□ -1.19
PTPRD-214ENST00000540109 ATP7BP35670 1465 aa7.6□□□□□ -1.19
PTPRD-214ENST00000540109 CSPP1Q1MSJ5 1256 aa7.6□□□□□ -1.19
PTPRD-214ENST00000540109 ANKRD26Q9UPS8 1709 aa7.6□□□□□ -1.19
PTPRD-214ENST00000540109 MORC1Q86VD1 984 aa7.59□□□□□ -1.19
PTPRD-214ENST00000540109 TULP4Q9NRJ4 1543 aa7.59□□□□□ -1.19
PTPRD-214ENST00000540109 A2ML1A8K2U0 1454 aa7.59□□□□□ -1.19
PTPRD-214ENST00000540109 RIMS2Q9UQ26 1411 aa7.59□□□□□ -1.19
PTPRD-214ENST00000540109 GOLGA2Q08379 1002 aa7.59□□□□□ -1.19
PTPRD-214ENST00000540109 FAM135BQ49AJ0 1406 aa7.59□□□□□ -1.19
PTPRD-214ENST00000540109 ABCC11Q96J66 1382 aa7.59□□□□□ -1.19
PTPRD-214ENST00000540109 PTPRMP28827 1452 aa7.59□□□□□ -1.19
PTPRD-214ENST00000540109 HDGFL2Q7Z4V5 671 aaPredicted RBP7.58□□□□□ -1.2
PTPRD-214ENST00000540109 TRAK1Q9UPV9 953 aa7.58□□□□□ -1.2
PTPRD-214ENST00000540109 SKOR2Q2VWA4 1001 aaPredicted RBP7.58□□□□□ -1.2
PTPRD-214ENST00000540109 TSPYL1Q9H0U9 437 aa7.58□□□□□ -1.2
PTPRD-214ENST00000540109 TECPR2O15040 1411 aa7.58□□□□□ -1.2
PTPRD-214ENST00000540109 PRDM10Q9NQV6 1147 aa7.58□□□□□ -1.2
PTPRD-214ENST00000540109 ZHX1Q9UKY1 873 aaPredicted RBP7.57□□□□□ -1.2
PTPRD-214ENST00000540109 POGKQ9P215 609 aa7.57□□□□□ -1.2
PTPRD-214ENST00000540109 TNRQ92752 1358 aa7.57□□□□□ -1.2
PTPRD-214ENST00000540109 GBP4Q96PP9 640 aa7.57□□□□□ -1.2
PTPRD-214ENST00000540109 TSPOAP1O95153 1857 aa7.57□□□□□ -1.2
PTPRD-214ENST00000540109 CT47B1P0C2W7 299 aaPredicted RBP7.57□□□□□ -1.2
PTPRD-214ENST00000540109 CCDC27Q2M243 656 aa7.57□□□□□ -1.2
PTPRD-214ENST00000540109 ZNF521Q96K83 1311 aa7.56□□□□□ -1.2
PTPRD-214ENST00000540109 DIP2AQ14689 1571 aa7.56□□□□□ -1.2
PTPRD-214ENST00000540109 CPS1P31327 1500 aa7.56□□□□□ -1.2
PTPRD-214ENST00000540109 NAP1L2Q9ULW6 460 aaPredicted RBP7.56□□□□□ -1.2
PTPRD-214ENST00000540109 NKTRP30414 1462 aaKnown RBP7.56□□□□□ -1.2
PTPRD-214ENST00000540109 NFKBIBQ15653 356 aa7.56□□□□□ -1.2
PTPRD-214ENST00000540109 HSP90AB1P08238 724 aaKnown RBP7.56□□□□□ -1.2
PTPRD-214ENST00000540109 KIAA2012Q0VF49 1180 aa7.56□□□□□ -1.2
PTPRD-214ENST00000540109 ADAMTS8Q9UP79 889 aa7.56□□□□□ -1.2
PTPRD-214ENST00000540109 RUNDC1Q96C34 613 aa7.55□□□□□ -1.2
PTPRD-214ENST00000540109 R3HCC1Q9Y3T6 440 aaKnown RBP7.55□□□□□ -1.2
PTPRD-214ENST00000540109 MYO5BQ9ULV0 1848 aa7.55□□□□□ -1.2
PTPRD-214ENST00000540109 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.55□□□□□ -1.2
PTPRD-214ENST00000540109 WDR63Q8IWG1 891 aa7.55□□□□□ -1.2
PTPRD-214ENST00000540109 WWC1Q8IX03 1113 aa7.55□□□□□ -1.2
PTPRD-214ENST00000540109 SETD1AO15047 1707 aaKnown RBP7.55□□□□□ -1.2
PTPRD-214ENST00000540109 ADGRB2O60241 1585 aa7.54□□□□□ -1.2
PTPRD-214ENST00000540109 HMGB1P09429 215 aaKnown RBP7.54□□□□□ -1.2
PTPRD-214ENST00000540109 HOMEZQ8IX15 550 aa7.54□□□□□ -1.2
PTPRD-214ENST00000540109 ZMYM3Q14202 1370 aa7.54□□□□□ -1.2
PTPRD-214ENST00000540109 SYAP1Q96A49 352 aaPredicted RBP7.54□□□□□ -1.2
PTPRD-214ENST00000540109 CFAP65Q6ZU64 1925 aaKnown RBP7.54□□□□□ -1.2
PTPRD-214ENST00000540109 CARD14Q9BXL6 1004 aa7.54□□□□□ -1.2
PTPRD-214ENST00000540109 SRPK2P78362 688 aaKnown RBP7.54□□□□□ -1.2
PTPRD-214ENST00000540109 SLFN5Q08AF3 891 aa7.54□□□□□ -1.2
PTPRD-214ENST00000540109 KIF20BQ96Q89 1820 aa7.54□□□□□ -1.2
PTPRD-214ENST00000540109 CDC42BPGQ6DT37 1551 aa7.53□□□□□ -1.2
PTPRD-214ENST00000540109 CCDC66A2RUB6 948 aa7.53□□□□□ -1.2
PTPRD-214ENST00000540109 TRMT2AQ8IZ69 625 aaKnown RBP7.53□□□□□ -1.2
PTPRD-214ENST00000540109 GOLGA6L1Q8N7Z2 621 aa7.53□□□□□ -1.2
PTPRD-214ENST00000540109 SHPRHQ149N8 1683 aa7.53□□□□□ -1.2
PTPRD-214ENST00000540109 PLEKHG1Q9ULL1 1385 aa7.53□□□□□ -1.2
PTPRD-214ENST00000540109 IQSEC2Q5JU85 1478 aa7.53□□□□□ -1.2
PTPRD-214ENST00000540109 DDX11L8A8MPP1 907 aa7.53□□□□□ -1.2
PTPRD-214ENST00000540109 RBM25P49756 843 aaKnown RBP7.53□□□□□ -1.2
PTPRD-214ENST00000540109 FGD1P98174 961 aa7.53□□□□□ -1.2
PTPRD-214ENST00000540109 PDE4AP27815 886 aa7.52□□□□□ -1.21
PTPRD-214ENST00000540109 HSCBQ8IWL3 235 aa7.52□□□□□ -1.21
PTPRD-214ENST00000540109 IL16Q14005 1332 aa7.52□□□□□ -1.21
PTPRD-214ENST00000540109 EDC4Q6P2E9 1401 aaKnown RBP7.52□□□□□ -1.21
PTPRD-214ENST00000540109 CALD1Q05682 793 aaKnown RBP7.52□□□□□ -1.21
PTPRD-214ENST00000540109 TMEM132EQ6IEE7 984 aa7.52□□□□□ -1.21
PTPRD-214ENST00000540109 TMEM2Q9UHN6 1383 aa7.52□□□□□ -1.21
PTPRD-214ENST00000540109 UBR1Q8IWV7 1749 aa7.52□□□□□ -1.21
PTPRD-214ENST00000540109 A0A1W2PP64 1363 aa7.52□□□□□ -1.21
PTPRD-214ENST00000540109 PDE3AQ14432 1141 aa7.51□□□□□ -1.21
PTPRD-214ENST00000540109 DUSP27Q5VZP5 1158 aa7.51□□□□□ -1.21
PTPRD-214ENST00000540109 PRAM1Q96QH2 718 aa7.51□□□□□ -1.21
PTPRD-214ENST00000540109 ZNF692Q9BU19 519 aaPredicted RBP7.51□□□□□ -1.21
PTPRD-214ENST00000540109 SLIT1O75093 1534 aa7.51□□□□□ -1.21
PTPRD-214ENST00000540109 SLC12A5Q9H2X9 1139 aa7.51□□□□□ -1.21
PTPRD-214ENST00000540109 AATKQ6ZMQ8 1374 aa7.51□□□□□ -1.21
PTPRD-214ENST00000540109 PLEKHH1Q9ULM0 1364 aa7.51□□□□□ -1.21
PTPRD-214ENST00000540109 NRXN3Q9Y4C0 1643 aa7.5□□□□□ -1.21
PTPRD-214ENST00000540109 PIK3R4Q99570 1358 aa7.5□□□□□ -1.21
PTPRD-214ENST00000540109 VGLL3A8MV65 326 aa7.5□□□□□ -1.21
PTPRD-214ENST00000540109 DRC7Q8IY82 874 aa7.5□□□□□ -1.21
PTPRD-214ENST00000540109 EID1Q9Y6B2 187 aa7.5□□□□□ -1.21
PTPRD-214ENST00000540109 ZNF428Q96B54 188 aa7.5□□□□□ -1.21
PTPRD-214ENST00000540109 MAPK8IP3Q9UPT6 1336 aa7.5□□□□□ -1.21
PTPRD-214ENST00000540109 CASC1Q6TDU7 716 aa7.5□□□□□ -1.21
PTPRD-214ENST00000540109 CENPQQ7L2Z9 268 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms