RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 NOP2P46087 812 aaKnown RBP7.51□□□□□ -1.21
SNHG1-211ENST00000539921 SLFNL1Q499Z3 407 aa7.51□□□□□ -1.21
SNHG1-211ENST00000539921 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.51□□□□□ -1.21
SNHG1-211ENST00000539921 FAM184AQ8NB25 1140 aa7.51□□□□□ -1.21
SNHG1-211ENST00000539921 RASSF4Q9H2L5 321 aa7.51□□□□□ -1.21
SNHG1-211ENST00000539921 KNSTRNQ9Y448 316 aa7.51□□□□□ -1.21
SNHG1-211ENST00000539921 FHOD3Q2V2M9 1422 aa7.51□□□□□ -1.21
SNHG1-211ENST00000539921 ATAD2Q6PL18 1390 aa7.5□□□□□ -1.21
SNHG1-211ENST00000539921 SSR1P43307 286 aaKnown RBP7.5□□□□□ -1.21
SNHG1-211ENST00000539921 PDE3AQ14432 1141 aa7.5□□□□□ -1.21
SNHG1-211ENST00000539921 UVSSAQ2YD98 709 aa7.5□□□□□ -1.21
SNHG1-211ENST00000539921 REM2Q8IYK8 340 aaPredicted RBP7.5□□□□□ -1.21
SNHG1-211ENST00000539921 GOLGA6L1Q8N7Z2 621 aa7.5□□□□□ -1.21
SNHG1-211ENST00000539921 BANK1Q8NDB2 785 aa7.5□□□□□ -1.21
SNHG1-211ENST00000539921 PANK3Q9H999 370 aa7.5□□□□□ -1.21
SNHG1-211ENST00000539921 BCL2L12Q9HB09 334 aa7.5□□□□□ -1.21
SNHG1-211ENST00000539921 CTNNA3Q9UI47 895 aa7.5□□□□□ -1.21
SNHG1-211ENST00000539921 KDM2AQ9Y2K7 1162 aa7.5□□□□□ -1.21
SNHG1-211ENST00000539921 KANK1Q14678 1352 aa7.49□□□□□ -1.21
SNHG1-211ENST00000539921 PATL2C9JE40 543 aaKnown RBP7.49□□□□□ -1.21
SNHG1-211ENST00000539921 PRR29P0C7W0 189 aa7.49□□□□□ -1.21
SNHG1-211ENST00000539921 TNNT3P45378 269 aaPredicted RBP7.49□□□□□ -1.21
SNHG1-211ENST00000539921 GTF2A1P52655 376 aaPredicted RBP7.49□□□□□ -1.21
SNHG1-211ENST00000539921 MAP2K1Q02750 393 aaPredicted RBP7.49□□□□□ -1.21
SNHG1-211ENST00000539921 SWT1Q5T5J6 900 aaKnown RBP7.49□□□□□ -1.21
SNHG1-211ENST00000539921 CREBZFQ9NS37 354 aa7.49□□□□□ -1.21
SNHG1-211ENST00000539921 KDM5CP41229 1560 aa7.49□□□□□ -1.21
SNHG1-211ENST00000539921 EFCAB5A4FU69 1503 aa7.48□□□□□ -1.21
SNHG1-211ENST00000539921 CYP2C19P33261 490 aa7.48□□□□□ -1.21
SNHG1-211ENST00000539921 NUBP1P53384 320 aa7.48□□□□□ -1.21
SNHG1-211ENST00000539921 ZKSCAN8Q15776 578 aaPredicted RBP7.48□□□□□ -1.21
SNHG1-211ENST00000539921 DCAF8Q5TAQ9 597 aa7.48□□□□□ -1.21
SNHG1-211ENST00000539921 RNF20Q5VTR2 975 aa7.48□□□□□ -1.21
SNHG1-211ENST00000539921 CAVIN1Q6NZI2 390 aaKnown RBP7.48□□□□□ -1.21
SNHG1-211ENST00000539921 NBPF10Q6P3W6 841 aaKnown RBP7.48□□□□□ -1.21
SNHG1-211ENST00000539921 TNPO1Q92973 898 aaKnown RBP7.48□□□□□ -1.21
SNHG1-211ENST00000539921 DHX16O60231 1041 aaKnown RBP7.47□□□□□ -1.21
SNHG1-211ENST00000539921 CASQ1P31415 396 aa7.47□□□□□ -1.21
SNHG1-211ENST00000539921 RABEP1Q15276 862 aa7.47□□□□□ -1.21
SNHG1-211ENST00000539921 TXLNBQ8N3L3 684 aa7.47□□□□□ -1.21
SNHG1-211ENST00000539921 PMFBP1Q8TBY8 1022 aa7.47□□□□□ -1.21
SNHG1-211ENST00000539921 SIRT1Q96EB6 747 aa7.47□□□□□ -1.21
SNHG1-211ENST00000539921 CWC15Q9P013 229 aaKnown RBP7.47□□□□□ -1.21
SNHG1-211ENST00000539921 ARHGEF12Q9NZN5 1544 aa7.47□□□□□ -1.21
SNHG1-211ENST00000539921 UHRF1BP1Q6BDS2 1440 aa7.46□□□□□ -1.21
SNHG1-211ENST00000539921 MBD3O95983 291 aa7.46□□□□□ -1.22
SNHG1-211ENST00000539921 GSCP56915 257 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-211ENST00000539921 NOLC1Q14978 699 aaKnown RBP eCLIP7.46□□□□□ -1.226e-9■■■■■ 28.9
SNHG1-211ENST00000539921 NOM1Q5C9Z4 860 aaKnown RBP7.46□□□□□ -1.22
SNHG1-211ENST00000539921 LRSAM1Q6UWE0 723 aa7.46□□□□□ -1.22
SNHG1-211ENST00000539921 CCDC91Q7Z6B0 441 aa7.46□□□□□ -1.22
SNHG1-211ENST00000539921 SUGP1Q8IWZ8 645 aaKnown RBP7.46□□□□□ -1.22
SNHG1-211ENST00000539921 RNF25Q96BH1 459 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-211ENST00000539921 V9GYY5 206 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-211ENST00000539921 DENND4BO75064 1496 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-211ENST00000539921 TCOF1Q13428 1488 aaKnown RBP7.46□□□□□ -1.22
SNHG1-211ENST00000539921 RALGAPBQ86X10 1494 aa7.46□□□□□ -1.22
SNHG1-211ENST00000539921 E9PSI1 815 aa7.45□□□□□ -1.22
SNHG1-211ENST00000539921 NEFHP12036 1026 aa7.45□□□□□ -1.22
SNHG1-211ENST00000539921 NUCB2P80303 420 aa7.45□□□□□ -1.22
SNHG1-211ENST00000539921 RAD51AP2Q09MP3 1159 aa7.45□□□□□ -1.22
SNHG1-211ENST00000539921 NBPF6Q5VWK0 638 aa7.45□□□□□ -1.22
SNHG1-211ENST00000539921 NBPF5PQ86XG9 351 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-211ENST00000539921 IQUBQ8NA54 791 aa7.45□□□□□ -1.22
SNHG1-211ENST00000539921 NBPF4Q96M43 638 aa7.45□□□□□ -1.22
SNHG1-211ENST00000539921 FAM210AQ96ND0 272 aa7.45□□□□□ -1.22
SNHG1-211ENST00000539921 PUS7Q96PZ0 661 aaKnown RBP7.45□□□□□ -1.22
SNHG1-211ENST00000539921 HMGXB3Q12766 1538 aa7.45□□□□□ -1.22
SNHG1-211ENST00000539921 ABCC2Q92887 1545 aa7.45□□□□□ -1.22
SNHG1-211ENST00000539921 ZNF608Q9ULD9 1512 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-211ENST00000539921 CASKIN1Q8WXD9 1431 aa7.44□□□□□ -1.22
SNHG1-211ENST00000539921 PITPNM1O00562 1244 aa7.44□□□□□ -1.22
SNHG1-211ENST00000539921 PPP1R12AO14974 1030 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-211ENST00000539921 ZNF853P0CG23 659 aa7.44□□□□□ -1.22
SNHG1-211ENST00000539921 MNX1P50219 401 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-211ENST00000539921 ZSCAN23Q3MJ62 389 aa7.44□□□□□ -1.22
SNHG1-211ENST00000539921 AEBP1Q8IUX7 1158 aa7.44□□□□□ -1.22
SNHG1-211ENST00000539921 ZNF397Q8NF99 534 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-211ENST00000539921 KIF18AQ8NI77 898 aa7.44□□□□□ -1.22
SNHG1-211ENST00000539921 C22orf23Q9BZE7 217 aa7.44□□□□□ -1.22
SNHG1-211ENST00000539921 TERF2IPQ9NYB0 399 aa7.44□□□□□ -1.22
SNHG1-211ENST00000539921 RSPH14Q9UHP6 348 aa7.44□□□□□ -1.22
SNHG1-211ENST00000539921 DDX49Q9Y6V7 483 aaKnown RBP7.44□□□□□ -1.22
SNHG1-211ENST00000539921 ZNF521Q96K83 1311 aa7.44□□□□□ -1.22
SNHG1-211ENST00000539921 BCORL1Q5H9F3 1711 aa7.44□□□□□ -1.22
SNHG1-211ENST00000539921 SYNMO15061 1565 aa7.43□□□□□ -1.22
SNHG1-211ENST00000539921 CCDC196A0A1B0GTZ2 297 aa7.43□□□□□ -1.22
SNHG1-211ENST00000539921 A0A1B0GUL7 405 aa7.43□□□□□ -1.22
SNHG1-211ENST00000539921 SMTNL1A8MU46 457 aa7.43□□□□□ -1.22
SNHG1-211ENST00000539921 LIG1P18858 919 aa7.43□□□□□ -1.22
SNHG1-211ENST00000539921 U2AF2P26368 475 aaKnown RBP eCLIP7.43□□□□□ -1.222e-8■■■■□ 21.3
SNHG1-211ENST00000539921 CDCA8Q53HL2 280 aa7.43□□□□□ -1.22
SNHG1-211ENST00000539921 CT47A1Q5JQC4 288 aaPredicted RBP7.43□□□□□ -1.22
SNHG1-211ENST00000539921 TEX35Q5T0J7 233 aa7.43□□□□□ -1.22
SNHG1-211ENST00000539921 CASC1Q6TDU7 716 aa7.43□□□□□ -1.22
SNHG1-211ENST00000539921 OTUD6BQ8N6M0 293 aa7.43□□□□□ -1.22
SNHG1-211ENST00000539921 SYAP1Q96A49 352 aaPredicted RBP7.43□□□□□ -1.22
SNHG1-211ENST00000539921 KIF1BPQ96EK5 621 aa7.43□□□□□ -1.22
SNHG1-211ENST00000539921 CEP89Q96ST8 783 aa7.43□□□□□ -1.22
SNHG1-211ENST00000539921 NBPF3Q9H094 633 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms