RNA–Protein interactions for RNA: ENST00000539891.5

SLC3A2-215, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-215ENST00000539891 USP21Q9UK80 565 aa15.38■□□□□ 0.05
SLC3A2-215ENST00000539891 BCL9LQ86UU0 1499 aa15.37■□□□□ 0.05
SLC3A2-215ENST00000539891 NWD2Q9ULI1 1742 aa15.37■□□□□ 0.05
SLC3A2-215ENST00000539891 CABLES1Q8TDN4 633 aa15.37■□□□□ 0.05
SLC3A2-215ENST00000539891 SLIT2O94813 1529 aa15.37■□□□□ 0.05
SLC3A2-215ENST00000539891 ATRNO75882 1429 aa15.36■□□□□ 0.05
SLC3A2-215ENST00000539891 RBM6P78332 1123 aaKnown RBP15.36■□□□□ 0.05
SLC3A2-215ENST00000539891 TRPC5Q9UL62 973 aaPredicted RBP15.36■□□□□ 0.05
SLC3A2-215ENST00000539891 BRD4O60885 1362 aaPredicted RBP15.36■□□□□ 0.05
SLC3A2-215ENST00000539891 PLCH1Q4KWH8 1693 aa15.35■□□□□ 0.05
SLC3A2-215ENST00000539891 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
SLC3A2-215ENST00000539891 HAP1P54257 671 aaPredicted RBP15.34■□□□□ 0.05
SLC3A2-215ENST00000539891 AKAP12Q02952 1782 aa15.34■□□□□ 0.05
SLC3A2-215ENST00000539891 PHRF1Q9P1Y6 1649 aaKnown RBP15.33■□□□□ 0.05
SLC3A2-215ENST00000539891 ATAD2Q6PL18 1390 aa15.33■□□□□ 0.04
SLC3A2-215ENST00000539891 CABP1Q9NZU7 370 aa15.33■□□□□ 0.04
SLC3A2-215ENST00000539891 COL14A1Q05707 1796 aaKnown RBP15.32■□□□□ 0.04
SLC3A2-215ENST00000539891 USP6P35125 1406 aa15.32■□□□□ 0.04
SLC3A2-215ENST00000539891 UNC5CLQ8IV45 518 aa15.31■□□□□ 0.04
SLC3A2-215ENST00000539891 FAM83GA6ND36 823 aa15.3■□□□□ 0.04
SLC3A2-215ENST00000539891 PLEKHG5O94827 1062 aa15.3■□□□□ 0.04
SLC3A2-215ENST00000539891 PUS7Q96PZ0 661 aaKnown RBP15.3■□□□□ 0.04
SLC3A2-215ENST00000539891 RGS12O14924 1447 aa15.3■□□□□ 0.04
SLC3A2-215ENST00000539891 SSH2Q76I76 1423 aa15.3■□□□□ 0.04
SLC3A2-215ENST00000539891 NRAPQ86VF7 1730 aa15.3■□□□□ 0.04
SLC3A2-215ENST00000539891 SLC24A1O60721 1099 aa15.29■□□□□ 0.04
SLC3A2-215ENST00000539891 ABTB2Q8N961 1025 aa15.29■□□□□ 0.04
SLC3A2-215ENST00000539891 GJD4Q96KN9 370 aaPredicted RBP15.29■□□□□ 0.04
SLC3A2-215ENST00000539891 MON2Q7Z3U7 1717 aa15.28■□□□□ 0.04
SLC3A2-215ENST00000539891 CPSF1Q10570 1443 aaKnown RBP15.28■□□□□ 0.04
SLC3A2-215ENST00000539891 TESK2Q96S53 571 aa15.28■□□□□ 0.04
SLC3A2-215ENST00000539891 ZNF692Q9BU19 519 aaPredicted RBP15.28■□□□□ 0.04
SLC3A2-215ENST00000539891 USP19O94966 1318 aa15.28■□□□□ 0.04
SLC3A2-215ENST00000539891 GLI3P10071 1580 aa15.28■□□□□ 0.04
SLC3A2-215ENST00000539891 NRKQ7Z2Y5 1582 aa15.28■□□□□ 0.04
SLC3A2-215ENST00000539891 ST20-MTHFSA0A0A6YYL1 179 aa15.27■□□□□ 0.04
SLC3A2-215ENST00000539891 PIK3C2AO00443 1686 aa15.26■□□□□ 0.03
SLC3A2-215ENST00000539891 VPS72Q15906 364 aa15.26■□□□□ 0.03
SLC3A2-215ENST00000539891 NLRP13Q86W25 1043 aa15.26■□□□□ 0.03
SLC3A2-215ENST00000539891 CCER1Q8TC90 406 aaPredicted RBP15.26■□□□□ 0.03
SLC3A2-215ENST00000539891 NUTM2GQ5VZR2 741 aa15.25■□□□□ 0.03
SLC3A2-215ENST00000539891 USP47Q96K76 1375 aa15.25■□□□□ 0.03
SLC3A2-215ENST00000539891 BTG4Q9NY30 223 aa15.24■□□□□ 0.03
SLC3A2-215ENST00000539891 EP400Q96L91 3159 aa15.24■□□□□ 0.03
SLC3A2-215ENST00000539891 CPDO75976 1380 aa15.24■□□□□ 0.03
SLC3A2-215ENST00000539891 KIAA0232Q92628 1395 aa15.24■□□□□ 0.03
SLC3A2-215ENST00000539891 CD163L1Q9NR16 1453 aa15.24■□□□□ 0.03
SLC3A2-215ENST00000539891 SLIT3O75094 1523 aa15.24■□□□□ 0.03
SLC3A2-215ENST00000539891 PRDM11Q9NQV5 511 aa15.23■□□□□ 0.03
SLC3A2-215ENST00000539891 TTC21BQ7Z4L5 1316 aa15.23■□□□□ 0.03
SLC3A2-215ENST00000539891 TTC21AQ8NDW8 1320 aa15.23■□□□□ 0.03
SLC3A2-215ENST00000539891 KTN1Q86UP2 1357 aaKnown RBP15.22■□□□□ 0.03
SLC3A2-215ENST00000539891 BRWD3Q6RI45 1802 aa15.22■□□□□ 0.03
SLC3A2-215ENST00000539891 ONECUT3O60422 494 aaPredicted RBP15.21■□□□□ 0.03
SLC3A2-215ENST00000539891 GCP02774 474 aa15.21■□□□□ 0.03
SLC3A2-215ENST00000539891 NLRP6P59044 892 aa15.21■□□□□ 0.03
SLC3A2-215ENST00000539891 USP54Q70EL1 1684 aa15.21■□□□□ 0.03
SLC3A2-215ENST00000539891 LMO7Q8WWI1 1683 aa15.21■□□□□ 0.03
SLC3A2-215ENST00000539891 NINLQ9Y2I6 1382 aa15.21■□□□□ 0.03
SLC3A2-215ENST00000539891 ZC3H6P61129 1189 aaKnown RBP15.2■□□□□ 0.02
SLC3A2-215ENST00000539891 UPF1Q92900 1129 aaKnown RBP eCLIP15.2■□□□□ 0.02
SLC3A2-215ENST00000539891 SLC12A5Q9H2X9 1139 aa15.2■□□□□ 0.02
SLC3A2-215ENST00000539891 TMC1Q8TDI8 760 aa15.19■□□□□ 0.02
SLC3A2-215ENST00000539891 TMF1P82094 1093 aa15.18■□□□□ 0.02
SLC3A2-215ENST00000539891 CHRNA2Q15822 529 aa15.18■□□□□ 0.02
SLC3A2-215ENST00000539891 HDGFL2Q7Z4V5 671 aaPredicted RBP15.18■□□□□ 0.02
SLC3A2-215ENST00000539891 TERF2IPQ9NYB0 399 aa15.18■□□□□ 0.02
SLC3A2-215ENST00000539891 CAMTA1Q9Y6Y1 1673 aa15.18■□□□□ 0.02
SLC3A2-215ENST00000539891 EDC4Q6P2E9 1401 aaKnown RBP15.18■□□□□ 0.02
SLC3A2-215ENST00000539891 COL18A1P39060 1754 aa15.18■□□□□ 0.02
SLC3A2-215ENST00000539891 USP31Q70CQ4 1352 aa15.18■□□□□ 0.02
SLC3A2-215ENST00000539891 SPATA31A5Q5VU36 1347 aa15.18■□□□□ 0.02
SLC3A2-215ENST00000539891 SPATA31A7Q8IWB4 1347 aa15.18■□□□□ 0.02
SLC3A2-215ENST00000539891 CCDC9Q9Y3X0 531 aaKnown RBP15.17■□□□□ 0.02
SLC3A2-215ENST00000539891 A0A1W2PP64 1363 aa15.17■□□□□ 0.02
SLC3A2-215ENST00000539891 KCNH5Q8NCM2 988 aa15.17■□□□□ 0.02
SLC3A2-215ENST00000539891 CDCA8Q53HL2 280 aa15.16■□□□□ 0.02
SLC3A2-215ENST00000539891 SEPT12Q8IYM1 358 aa15.16■□□□□ 0.02
SLC3A2-215ENST00000539891 AATKQ6ZMQ8 1374 aa15.15■□□□□ 0.02
SLC3A2-215ENST00000539891 NFAT5O94916 1531 aa15.15■□□□□ 0.02
SLC3A2-215ENST00000539891 THSD7AQ9UPZ6 1657 aa15.15■□□□□ 0.02
SLC3A2-215ENST00000539891 RGPD5Q99666 1765 aa15.14■□□□□ 0.01
SLC3A2-215ENST00000539891 SPATA31A1Q5TZJ5 1347 aa15.14■□□□□ 0.01
SLC3A2-215ENST00000539891 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.14■□□□□ 0.01
SLC3A2-215ENST00000539891 STRN4Q9NRL3 753 aa15.14■□□□□ 0.01
SLC3A2-215ENST00000539891 COL5A2P05997 1499 aaPredicted RBP15.13■□□□□ 0.01
SLC3A2-215ENST00000539891 ARHGEF25Q86VW2 580 aa15.13■□□□□ 0.01
SLC3A2-215ENST00000539891 ABCC6O95255 1503 aa15.12■□□□□ 0.01
SLC3A2-215ENST00000539891 ANKRD36BQ8N2N9 1353 aa15.12■□□□□ 0.01
SLC3A2-215ENST00000539891 MYOM1P52179 1685 aa15.12■□□□□ 0.01
SLC3A2-215ENST00000539891 EVA1CP58658 441 aa15.12■□□□□ 0.01
SLC3A2-215ENST00000539891 FAM98CQ17RN3 349 aaKnown RBP15.12■□□□□ 0.01
SLC3A2-215ENST00000539891 NME9Q86XW9 330 aa15.12■□□□□ 0.01
SLC3A2-215ENST00000539891 LTN1O94822 1766 aa15.12■□□□□ 0.01
SLC3A2-215ENST00000539891 ZRANB1Q9UGI0 708 aa15.11■□□□□ 0.01
SLC3A2-215ENST00000539891 OVOS2A0A0J9YW53 1432 aa15.1■□□□□ 0.01
SLC3A2-215ENST00000539891 OVOS2Q6IE36 1432 aa15.1■□□□□ 0.01
SLC3A2-215ENST00000539891 LARP1Q6PKG0 1096 aaKnown RBP15.1■□□□□ 0.01
SLC3A2-215ENST00000539891 BARGINQ6ZT62 677 aa15.1■□□□□ 0.01
SLC3A2-215ENST00000539891 KRT27Q7Z3Y8 459 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms