RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 NOM1Q5C9Z4 860 aaKnown RBP1.93□□□□□ -2.1
HIF1A-204ENST00000539097 GLMNQ92990 594 aa1.93□□□□□ -2.1
HIF1A-204ENST00000539097 HOXA2O43364 376 aa1.93□□□□□ -2.1
HIF1A-204ENST00000539097 EIF4EBP3O60516 100 aaPredicted RBP1.93□□□□□ -2.1
HIF1A-204ENST00000539097 USP17L8P0C7I0 530 aa1.93□□□□□ -2.1
HIF1A-204ENST00000539097 RNF19BQ6ZMZ0 732 aa1.93□□□□□ -2.1
HIF1A-204ENST00000539097 RIC3Q7Z5B4 369 aa1.93□□□□□ -2.1
HIF1A-204ENST00000539097 SEPT12Q8IYM1 358 aa1.93□□□□□ -2.1
HIF1A-204ENST00000539097 TATDN2Q93075 761 aa1.93□□□□□ -2.1
HIF1A-204ENST00000539097 ZBTB3Q9H5J0 574 aa1.93□□□□□ -2.1
HIF1A-204ENST00000539097 WASLO00401 505 aaPredicted RBP1.92□□□□□ -2.1
HIF1A-204ENST00000539097 VAC14Q08AM6 782 aa1.92□□□□□ -2.1
HIF1A-204ENST00000539097 KIAA1468Q9P260 1216 aa1.92□□□□□ -2.1
HIF1A-204ENST00000539097 HDGFP51858 240 aaKnown RBP1.92□□□□□ -2.1
HIF1A-204ENST00000539097 TSGA10IPQ3SY00 556 aa1.92□□□□□ -2.1
HIF1A-204ENST00000539097 SWT1Q5T5J6 900 aaKnown RBP1.92□□□□□ -2.1
HIF1A-204ENST00000539097 BLOC1S3Q6QNY0 202 aa1.92□□□□□ -2.1
HIF1A-204ENST00000539097 PRR7Q8TB68 274 aa1.92□□□□□ -2.1
HIF1A-204ENST00000539097 SIRT1Q96EB6 747 aa1.92□□□□□ -2.1
HIF1A-204ENST00000539097 PNMA3Q9UL41 463 aa1.92□□□□□ -2.1
HIF1A-204ENST00000539097 RAD21O60216 631 aa1.92□□□□□ -2.1
HIF1A-204ENST00000539097 BRD1O95696 1058 aa1.92□□□□□ -2.1
HIF1A-204ENST00000539097 RFX1P22670 979 aa1.92□□□□□ -2.1
HIF1A-204ENST00000539097 CANXP27824 592 aaKnown RBP1.92□□□□□ -2.1
HIF1A-204ENST00000539097 ABL2P42684 1182 aa1.92□□□□□ -2.1
HIF1A-204ENST00000539097 RPIAP49247 311 aa1.92□□□□□ -2.1
HIF1A-204ENST00000539097 TRMT44Q8IYL2 757 aaKnown RBP1.92□□□□□ -2.1
HIF1A-204ENST00000539097 LRCH3Q96II8 777 aa1.92□□□□□ -2.1
HIF1A-204ENST00000539097 PRDM9Q9NQV7 894 aa1.92□□□□□ -2.1
HIF1A-204ENST00000539097 ACIN1Q9UKV3 1341 aaKnown RBP1.92□□□□□ -2.1
HIF1A-204ENST00000539097 LGR5O75473 907 aa1.91□□□□□ -2.1
HIF1A-204ENST00000539097 AP1G2O75843 785 aa1.91□□□□□ -2.1
HIF1A-204ENST00000539097 FAM98CQ17RN3 349 aaKnown RBP1.91□□□□□ -2.1
HIF1A-204ENST00000539097 VARS2Q5ST30 1063 aaKnown RBP1.91□□□□□ -2.1
HIF1A-204ENST00000539097 PHLDB3Q6NSJ2 640 aa1.91□□□□□ -2.1
HIF1A-204ENST00000539097 SAMD7Q7Z3H4 446 aa1.91□□□□□ -2.1
HIF1A-204ENST00000539097 EFCC1Q9HA90 598 aa1.91□□□□□ -2.1
HIF1A-204ENST00000539097 MMP16P51512 607 aa1.91□□□□□ -2.1
HIF1A-204ENST00000539097 NR6A1Q15406 480 aa1.91□□□□□ -2.1
HIF1A-204ENST00000539097 CDCA8Q53HL2 280 aa1.91□□□□□ -2.1
HIF1A-204ENST00000539097 RNF20Q5VTR2 975 aa1.91□□□□□ -2.1
HIF1A-204ENST00000539097 FOXD4L5Q5VV16 416 aaPredicted RBP1.91□□□□□ -2.1
HIF1A-204ENST00000539097 NPM2Q86SE8 214 aaKnown RBP1.91□□□□□ -2.1
HIF1A-204ENST00000539097 FOXD4L4Q8WXT5 416 aaPredicted RBP1.91□□□□□ -2.1
HIF1A-204ENST00000539097 CITED4Q96RK1 184 aa1.91□□□□□ -2.1
HIF1A-204ENST00000539097 IGSF5Q9NSI5 407 aa1.91□□□□□ -2.1
HIF1A-204ENST00000539097 PDXDC2PQ6P474 469 aa1.91□□□□□ -2.1
HIF1A-204ENST00000539097 POTEAQ6S8J7 498 aa1.91□□□□□ -2.1
HIF1A-204ENST00000539097 MAP10Q9P2G4 905 aa1.91□□□□□ -2.1
HIF1A-204ENST00000539097 MAP4K5Q9Y4K4 846 aa1.91□□□□□ -2.1
HIF1A-204ENST00000539097 LYPD8Q6UX82 237 aa1.91□□□□□ -2.1
HIF1A-204ENST00000539097 TMEM88BA6NKF7 163 aa1.9□□□□□ -2.1
HIF1A-204ENST00000539097 KDM4AO75164 1064 aa1.9□□□□□ -2.1
HIF1A-204ENST00000539097 NR1I2O75469 434 aa1.9□□□□□ -2.1
HIF1A-204ENST00000539097 PTPRNQ16849 979 aa1.9□□□□□ -2.1
HIF1A-204ENST00000539097 SCARA3Q6AZY7 606 aa1.9□□□□□ -2.1
HIF1A-204ENST00000539097 FAM174AQ8TBP5 190 aa1.9□□□□□ -2.1
HIF1A-204ENST00000539097 KRTAP4-2Q9BYR5 136 aa1.9□□□□□ -2.1
HIF1A-204ENST00000539097 NBPF3Q9H094 633 aa1.9□□□□□ -2.1
HIF1A-204ENST00000539097 BCL11AQ9H165 835 aa1.9□□□□□ -2.1
HIF1A-204ENST00000539097 ZMIZ1Q9ULJ6 1067 aa1.9□□□□□ -2.1
HIF1A-204ENST00000539097 MTMR7Q9Y216 660 aa1.9□□□□□ -2.1
HIF1A-204ENST00000539097 STAU1O95793 577 aaKnown RBP1.9□□□□□ -2.11
HIF1A-204ENST00000539097 NPR3P17342 541 aa1.9□□□□□ -2.11
HIF1A-204ENST00000539097 CAPN12Q6ZSI9 719 aa1.9□□□□□ -2.11
HIF1A-204ENST00000539097 STK32AQ8WU08 396 aa1.9□□□□□ -2.11
HIF1A-204ENST00000539097 SLC27A5Q9Y2P5 690 aa1.9□□□□□ -2.11
HIF1A-204ENST00000539097 APLP1P51693 650 aa1.9□□□□□ -2.11
HIF1A-204ENST00000539097 HDGFL1Q5TGJ6 251 aa1.9□□□□□ -2.11
HIF1A-204ENST00000539097 TBC1D9Q6ZT07 1266 aa1.9□□□□□ -2.11
HIF1A-204ENST00000539097 RETREG3Q86VR2 466 aa1.9□□□□□ -2.11
HIF1A-204ENST00000539097 ZNF710Q8N1W2 664 aa1.9□□□□□ -2.11
HIF1A-204ENST00000539097 TSC1Q92574 1164 aa1.9□□□□□ -2.11
HIF1A-204ENST00000539097 CDCA7Q9BWT1 371 aaPredicted RBP1.9□□□□□ -2.11
HIF1A-204ENST00000539097 ALG2Q9H553 416 aa1.9□□□□□ -2.11
HIF1A-204ENST00000539097 TLL1O43897 1013 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 FBXO45P0C2W1 286 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 BCAMP50895 628 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 KRTAP1-3Q8IUG1 177 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 AEBP1Q8IUX7 1158 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 DEPDC4Q8N2C3 294 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 RDH13Q8NBN7 331 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 VPS9D1Q9Y2B5 631 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 IGHA1P01876 353 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 FDX1P10109 184 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 ATP6V1AP38606 617 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 KCNH2Q12809 1159 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 TRIM50Q86XT4 487 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 RGS22Q8NE09 1264 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 PALM3A6NDB9 673 aaPredicted RBP1.89□□□□□ -2.11
HIF1A-204ENST00000539097 JUNDP17535 347 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 EIF4G2P78344 907 aaKnown RBP eCLIP1.89□□□□□ -2.11
HIF1A-204ENST00000539097 NR1H3Q13133 447 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 SWI5Q1ZZU3 235 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 KRTAP4-9Q9BYQ8 210 aa1.89□□□□□ -2.11
HIF1A-204ENST00000539097 UTP3Q9NQZ2 479 aaKnown RBP eCLIP1.89□□□□□ -2.115e-6■■■■□ 23.1
HIF1A-204ENST00000539097 FAM205CA6NFA0 338 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 RNF40O75150 1001 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 CFHP08603 1231 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 CRTC2Q53ET0 693 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms