RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TMEM132AQ24JP5 1023 aa20.15■□□□□ 0.82
SCARB1-205ENST00000538291 ZFYVE27Q5T4F4 411 aa20.15■□□□□ 0.82
SCARB1-205ENST00000538291 HDGFL1Q5TGJ6 251 aa20.15■□□□□ 0.82
SCARB1-205ENST00000538291 WWC2Q6AWC2 1192 aa20.15■□□□□ 0.82
SCARB1-205ENST00000538291 FBXO3Q9UK99 471 aa20.15■□□□□ 0.82
SCARB1-205ENST00000538291 SPG7Q9UQ90 795 aa20.15■□□□□ 0.82
SCARB1-205ENST00000538291 GNAI2P04899 355 aa20.15■□□□□ 0.82
SCARB1-205ENST00000538291 NUTM2BA6NNL0 878 aaPredicted RBP20.14■□□□□ 0.82
SCARB1-205ENST00000538291 NUTM2EB1AL46 878 aaPredicted RBP20.14■□□□□ 0.82
SCARB1-205ENST00000538291 NUTM2AQ8IVF1 878 aaPredicted RBP20.14■□□□□ 0.82
SCARB1-205ENST00000538291 CDK5RAP3Q96JB5 506 aa20.14■□□□□ 0.82
SCARB1-205ENST00000538291 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.14■□□□□ 0.821e-8■■■■□ 21.3
SCARB1-205ENST00000538291 RRP12Q5JTH9 1297 aaKnown RBP20.14■□□□□ 0.81
SCARB1-205ENST00000538291 RUFY1Q96T51 708 aa20.14■□□□□ 0.81
SCARB1-205ENST00000538291 DDX54Q8TDD1 881 aaKnown RBP20.14■□□□□ 0.81
SCARB1-205ENST00000538291 EXOSC9Q06265 439 aaKnown RBP20.13■□□□□ 0.81
SCARB1-205ENST00000538291 CCDC173Q0VFZ6 552 aa20.13■□□□□ 0.81
SCARB1-205ENST00000538291 NCOA2Q15596 1464 aa20.13■□□□□ 0.81
SCARB1-205ENST00000538291 KDM4AO75164 1064 aa20.13■□□□□ 0.81
SCARB1-205ENST00000538291 ATP2B1P20020 1258 aa20.13■□□□□ 0.81
SCARB1-205ENST00000538291 GRIN2BQ13224 1484 aa20.13■□□□□ 0.81
SCARB1-205ENST00000538291 TXLNAP40222 546 aa20.13■□□□□ 0.81
SCARB1-205ENST00000538291 ZNF530Q6P9A1 599 aaPredicted RBP20.13■□□□□ 0.81
SCARB1-205ENST00000538291 PPP2R1AP30153 589 aa20.13■□□□□ 0.81
SCARB1-205ENST00000538291 SCAPERQ9BY12 1400 aa20.12■□□□□ 0.81
SCARB1-205ENST00000538291 PDCP20941 246 aa20.12■□□□□ 0.81
SCARB1-205ENST00000538291 MNS1Q8NEH6 495 aa20.12■□□□□ 0.81
SCARB1-205ENST00000538291 HSP90AA2PQ14568 343 aaPredicted RBP20.12■□□□□ 0.81
SCARB1-205ENST00000538291 SULT6B1Q6IMI4 303 aa20.12■□□□□ 0.81
SCARB1-205ENST00000538291 CDK19Q9BWU1 502 aa20.12■□□□□ 0.81
SCARB1-205ENST00000538291 SLC52A1Q9NWF4 448 aa20.12■□□□□ 0.81
SCARB1-205ENST00000538291 ANKLE2Q86XL3 938 aa20.11■□□□□ 0.81
SCARB1-205ENST00000538291 IFT57Q9NWB7 429 aa20.11■□□□□ 0.81
SCARB1-205ENST00000538291 PRG4Q92954 1404 aaPredicted RBP20.11■□□□□ 0.81
SCARB1-205ENST00000538291 PATL2C9JE40 543 aaKnown RBP20.11■□□□□ 0.81
SCARB1-205ENST00000538291 CASKIN1Q8WXD9 1431 aa20.11■□□□□ 0.81
SCARB1-205ENST00000538291 NACAP1Q9BZK3 213 aa20.1■□□□□ 0.81
SCARB1-205ENST00000538291 LRRC9Q6ZRR7 1453 aa20.1■□□□□ 0.81
SCARB1-205ENST00000538291 HFM1A2PYH4 1435 aa20.1■□□□□ 0.81
SCARB1-205ENST00000538291 SLC4A2P04920 1241 aa20.1■□□□□ 0.81
SCARB1-205ENST00000538291 RDXP35241 583 aaKnown RBP20.1■□□□□ 0.81
SCARB1-205ENST00000538291 PDILTQ8N807 584 aa20.1■□□□□ 0.81
SCARB1-205ENST00000538291 MCM2P49736 904 aa20.1■□□□□ 0.81
SCARB1-205ENST00000538291 HSP90AB2PQ58FF8 381 aa20.1■□□□□ 0.81
SCARB1-205ENST00000538291 TEX35Q5T0J7 233 aa20.1■□□□□ 0.81
SCARB1-205ENST00000538291 AK7Q96M32 723 aa20.1■□□□□ 0.81
SCARB1-205ENST00000538291 ACBD3Q9H3P7 528 aa20.09■□□□□ 0.81
SCARB1-205ENST00000538291 PRDM11Q9NQV5 511 aa20.09■□□□□ 0.81
SCARB1-205ENST00000538291 HMGXB3Q12766 1538 aa20.09■□□□□ 0.81
SCARB1-205ENST00000538291 KRT18P05783 430 aaKnown RBP20.09■□□□□ 0.81
SCARB1-205ENST00000538291 GCC1Q96CN9 775 aa20.09■□□□□ 0.81
SCARB1-205ENST00000538291 CABP1Q9NZU7 370 aa20.09■□□□□ 0.81
SCARB1-205ENST00000538291 KINO60870 393 aaKnown RBP20.09■□□□□ 0.81
SCARB1-205ENST00000538291 CCT4P50991 539 aaKnown RBP20.09■□□□□ 0.81
SCARB1-205ENST00000538291 ATP2B2Q01814 1243 aa20.09■□□□□ 0.81
SCARB1-205ENST00000538291 RSPH6AQ9H0K4 717 aa20.08■□□□□ 0.81
SCARB1-205ENST00000538291 ARGLU1Q9NWB6 273 aaPredicted RBP20.08■□□□□ 0.81
SCARB1-205ENST00000538291 MPHOSPH8Q99549 860 aa20.08■□□□□ 0.8
SCARB1-205ENST00000538291 NEK4P51957 841 aa20.08■□□□□ 0.8
SCARB1-205ENST00000538291 SRCIN1Q9C0H9 1055 aa20.08■□□□□ 0.8
SCARB1-205ENST00000538291 ZNF396Q96N95 335 aaPredicted RBP20.07■□□□□ 0.8
SCARB1-205ENST00000538291 MRC2Q9UBG0 1479 aa20.07■□□□□ 0.8
SCARB1-205ENST00000538291 SLC12A5Q9H2X9 1139 aa20.06■□□□□ 0.8
SCARB1-205ENST00000538291 PLEKHH2Q8IVE3 1493 aa20.06■□□□□ 0.8
SCARB1-205ENST00000538291 MAGEC2Q9UBF1 373 aaPredicted RBP20.06■□□□□ 0.8
SCARB1-205ENST00000538291 FILIP1LQ4L180 1135 aa20.06■□□□□ 0.8
SCARB1-205ENST00000538291 CCDC57Q2TAC2 916 aa20.05■□□□□ 0.8
SCARB1-205ENST00000538291 PIP4K2AP48426 406 aaPredicted RBP20.05■□□□□ 0.8
SCARB1-205ENST00000538291 PAF1Q8N7H5 531 aa20.05■□□□□ 0.8
SCARB1-205ENST00000538291 LETM1O95202 739 aaPredicted RBP20.05■□□□□ 0.8
SCARB1-205ENST00000538291 RTEL1-TNFRSF6BF6WH68 1400 aa20.04■□□□□ 0.8
SCARB1-205ENST00000538291 ZSCAN25Q6NSZ9 544 aa20.04■□□□□ 0.8
SCARB1-205ENST00000538291 STK38Q15208 465 aa20.04■□□□□ 0.8
SCARB1-205ENST00000538291 TRIM22Q8IYM9 498 aa20.04■□□□□ 0.8
SCARB1-205ENST00000538291 HMGB2P26583 209 aaKnown RBP20.04■□□□□ 0.8
SCARB1-205ENST00000538291 JMYQ8N9B5 988 aa20.04■□□□□ 0.8
SCARB1-205ENST00000538291 CAGE1Q8TC20 777 aa20.04■□□□□ 0.8
SCARB1-205ENST00000538291 IFT140Q96RY7 1462 aa20.03■□□□□ 0.8
SCARB1-205ENST00000538291 RABEP1Q15276 862 aa20.03■□□□□ 0.8
SCARB1-205ENST00000538291 C1orf115Q9H7X2 142 aa20.03■□□□□ 0.8
SCARB1-205ENST00000538291 POGZQ7Z3K3 1410 aa20.03■□□□□ 0.8
SCARB1-205ENST00000538291 SYCP1Q15431 976 aa20.03■□□□□ 0.8
SCARB1-205ENST00000538291 NOB1Q9ULX3 412 aaKnown RBP20.03■□□□□ 0.8
SCARB1-205ENST00000538291 FANCIQ9NVI1 1328 aa20.03■□□□□ 0.8
SCARB1-205ENST00000538291 HSP90B2PQ58FF3 399 aa20.03■□□□□ 0.8
SCARB1-205ENST00000538291 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.03■□□□□ 0.8
SCARB1-205ENST00000538291 ZNF771Q7L3S4 317 aaPredicted RBP20.03■□□□□ 0.8
SCARB1-205ENST00000538291 SIL1Q9H173 461 aa20.03■□□□□ 0.8
SCARB1-205ENST00000538291 MBD3O95983 291 aa20.02■□□□□ 0.8
SCARB1-205ENST00000538291 MYL6BP14649 208 aa20.02■□□□□ 0.8
SCARB1-205ENST00000538291 RBM5P52756 815 aaKnown RBP eCLIP20.02■□□□□ 0.8
SCARB1-205ENST00000538291 SLC26A8Q96RN1 970 aa20.02■□□□□ 0.8
SCARB1-205ENST00000538291 LRRCC1Q9C099 1032 aa20.02■□□□□ 0.8
SCARB1-205ENST00000538291 PDE3AQ14432 1141 aa20.02■□□□□ 0.8
SCARB1-205ENST00000538291 SMARCE1Q969G3 411 aa20.02■□□□□ 0.8
SCARB1-205ENST00000538291 MYO6Q9UM54 1294 aa20.02■□□□□ 0.79
SCARB1-205ENST00000538291 NBPF1Q3BBV0 1214 aa20.01■□□□□ 0.79
SCARB1-205ENST00000538291 PDZRN3Q9UPQ7 1066 aa20.01■□□□□ 0.79
SCARB1-205ENST00000538291 CFTRP13569 1480 aa20.01■□□□□ 0.79
SCARB1-205ENST00000538291 TSR2Q969E8 191 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms