RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 BTBD11A6QL63 1104 aa6.55□□□□□ -1.36
LRP6-203ENST00000538239 ZKSCAN1P17029 563 aaPredicted RBP6.55□□□□□ -1.36
LRP6-203ENST00000538239 NGLY1Q96IV0 654 aa6.55□□□□□ -1.36
LRP6-203ENST00000538239 CPLX1O14810 134 aa6.55□□□□□ -1.36
LRP6-203ENST00000538239 ERC2O15083 957 aa6.55□□□□□ -1.36
LRP6-203ENST00000538239 FAM161AQ3B820 660 aa6.54□□□□□ -1.36
LRP6-203ENST00000538239 WWC1Q8IX03 1113 aa6.54□□□□□ -1.36
LRP6-203ENST00000538239 NBPF8Q3BBV2 869 aa6.54□□□□□ -1.36
LRP6-203ENST00000538239 USHBP1Q8N6Y0 703 aa6.54□□□□□ -1.36
LRP6-203ENST00000538239 FAM135AQ9P2D6 1515 aa6.54□□□□□ -1.36
LRP6-203ENST00000538239 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.54□□□□□ -1.36
LRP6-203ENST00000538239 GLIPR1L2Q4G1C9 344 aa6.54□□□□□ -1.36
LRP6-203ENST00000538239 HDGFL1Q5TGJ6 251 aa6.54□□□□□ -1.36
LRP6-203ENST00000538239 RBM5P52756 815 aaKnown RBP eCLIP6.54□□□□□ -1.36
LRP6-203ENST00000538239 TWISTNBQ3B726 338 aaPredicted RBP6.54□□□□□ -1.36
LRP6-203ENST00000538239 TTC39AQ5SRH9 613 aa6.54□□□□□ -1.36
LRP6-203ENST00000538239 CPLX2Q6PUV4 134 aaKnown RBP6.54□□□□□ -1.36
LRP6-203ENST00000538239 NOC3LQ8WTT2 800 aaKnown RBP6.54□□□□□ -1.36
LRP6-203ENST00000538239 TSR2Q969E8 191 aaKnown RBP6.54□□□□□ -1.36
LRP6-203ENST00000538239 LNPKQ9C0E8 428 aa6.54□□□□□ -1.36
LRP6-203ENST00000538239 ANKRD30BQ9BXX2 1392 aa6.54□□□□□ -1.36
LRP6-203ENST00000538239 EXOSC9Q06265 439 aaKnown RBP6.54□□□□□ -1.36
LRP6-203ENST00000538239 C1orf115Q9H7X2 142 aa6.54□□□□□ -1.36
LRP6-203ENST00000538239 FOXO3O43524 673 aa6.53□□□□□ -1.36
LRP6-203ENST00000538239 STK11IPQ8N1F8 1099 aa6.53□□□□□ -1.36
LRP6-203ENST00000538239 SIL1Q9H173 461 aa6.53□□□□□ -1.36
LRP6-203ENST00000538239 SLC4A2P04920 1241 aa6.53□□□□□ -1.36
LRP6-203ENST00000538239 DMRT2Q9Y5R5 561 aa6.53□□□□□ -1.36
LRP6-203ENST00000538239 RNF20Q5VTR2 975 aa6.53□□□□□ -1.36
LRP6-203ENST00000538239 SURF6O75683 361 aaKnown RBP6.53□□□□□ -1.36
LRP6-203ENST00000538239 TBC1D2BQ9UPU7 963 aa6.53□□□□□ -1.36
LRP6-203ENST00000538239 ATAD2Q6PL18 1390 aa6.53□□□□□ -1.36
LRP6-203ENST00000538239 CCAR1Q8IX12 1150 aaKnown RBP6.53□□□□□ -1.36
LRP6-203ENST00000538239 CCDC43Q96MW1 224 aaKnown RBP6.53□□□□□ -1.36
LRP6-203ENST00000538239 KCNH5Q8NCM2 988 aa6.52□□□□□ -1.37
LRP6-203ENST00000538239 FSD1Q9BTV5 496 aa6.52□□□□□ -1.37
LRP6-203ENST00000538239 NSD3Q9BZ95 1437 aa6.52□□□□□ -1.37
LRP6-203ENST00000538239 REC8O95072 547 aa6.52□□□□□ -1.37
LRP6-203ENST00000538239 RALYLQ86SE5 291 aaKnown RBP6.52□□□□□ -1.37
LRP6-203ENST00000538239 PNISRQ8TF01 805 aaKnown RBP6.52□□□□□ -1.37
LRP6-203ENST00000538239 CHMP4CQ96CF2 233 aa6.52□□□□□ -1.37
LRP6-203ENST00000538239 TMOD3Q9NYL9 352 aa6.52□□□□□ -1.37
LRP6-203ENST00000538239 NOB1Q9ULX3 412 aaKnown RBP6.52□□□□□ -1.37
LRP6-203ENST00000538239 ATP2B2Q01814 1243 aa6.52□□□□□ -1.37
LRP6-203ENST00000538239 SPINK5Q9NQ38 1064 aaPredicted RBP6.52□□□□□ -1.37
LRP6-203ENST00000538239 PHF8Q9UPP1 1060 aa6.52□□□□□ -1.37
LRP6-203ENST00000538239 CCDC85AQ96PX6 553 aaPredicted RBP6.51□□□□□ -1.37
LRP6-203ENST00000538239 CCDC61Q9Y6R9 512 aa6.51□□□□□ -1.37
LRP6-203ENST00000538239 PTCD1O75127 700 aaKnown RBP6.51□□□□□ -1.37
LRP6-203ENST00000538239 RRP12Q5JTH9 1297 aaKnown RBP6.51□□□□□ -1.37
LRP6-203ENST00000538239 MIS18AQ9NYP9 233 aa6.51□□□□□ -1.37
LRP6-203ENST00000538239 BRD4O60885 1362 aaPredicted RBP6.51□□□□□ -1.37
LRP6-203ENST00000538239 NINLQ9Y2I6 1382 aa6.51□□□□□ -1.37
LRP6-203ENST00000538239 KRT28Q7Z3Y7 464 aa6.51□□□□□ -1.37
LRP6-203ENST00000538239 ASXL2Q76L83 1435 aa6.51□□□□□ -1.37
LRP6-203ENST00000538239 UBAP1LF5GYI3 381 aa6.51□□□□□ -1.37
LRP6-203ENST00000538239 IDI1Q13907 227 aa6.51□□□□□ -1.37
LRP6-203ENST00000538239 MPRIPQ6WCQ1 1025 aa6.51□□□□□ -1.37
LRP6-203ENST00000538239 CNKSR2Q8WXI2 1034 aa6.51□□□□□ -1.37
LRP6-203ENST00000538239 CDCA7LQ96GN5 454 aa6.51□□□□□ -1.37
LRP6-203ENST00000538239 MPHOSPH8Q99549 860 aa6.51□□□□□ -1.37
LRP6-203ENST00000538239 GNL3LQ9NVN8 582 aaKnown RBP6.51□□□□□ -1.37
LRP6-203ENST00000538239 INTS3Q68E01 1043 aaKnown RBP6.51□□□□□ -1.37
LRP6-203ENST00000538239 CNTROBQ8N137 903 aa6.51□□□□□ -1.37
LRP6-203ENST00000538239 ABCC5O15440 1437 aa6.51□□□□□ -1.37
LRP6-203ENST00000538239 GNAI3P08754 354 aa6.51□□□□□ -1.37
LRP6-203ENST00000538239 CCDC158Q5M9N0 1113 aa6.51□□□□□ -1.37
LRP6-203ENST00000538239 CEP89Q96ST8 783 aa6.51□□□□□ -1.37
LRP6-203ENST00000538239 NME9Q86XW9 330 aa6.5□□□□□ -1.37
LRP6-203ENST00000538239 KIF21AQ7Z4S6 1674 aa6.5□□□□□ -1.37
LRP6-203ENST00000538239 CLASRPQ8N2M8 674 aaKnown RBP6.5□□□□□ -1.37
LRP6-203ENST00000538239 GNAT3A8MTJ3 354 aa6.5□□□□□ -1.37
LRP6-203ENST00000538239 ZPR1O75312 459 aa6.5□□□□□ -1.37
LRP6-203ENST00000538239 TEX14Q8IWB6 1497 aa6.5□□□□□ -1.37
LRP6-203ENST00000538239 RAPGEF6Q8TEU7 1601 aa6.5□□□□□ -1.37
LRP6-203ENST00000538239 TNRQ92752 1358 aa6.5□□□□□ -1.37
LRP6-203ENST00000538239 MAP4K4O95819 1239 aaPredicted RBP6.5□□□□□ -1.37
LRP6-203ENST00000538239 CCDC57Q2TAC2 916 aa6.5□□□□□ -1.37
LRP6-203ENST00000538239 STARD3NLO95772 234 aa6.5□□□□□ -1.37
LRP6-203ENST00000538239 GNAI2P04899 355 aa6.5□□□□□ -1.37
LRP6-203ENST00000538239 TPM2P07951 284 aa6.5□□□□□ -1.37
LRP6-203ENST00000538239 ADGRF5Q8IZF2 1346 aa6.5□□□□□ -1.37
LRP6-203ENST00000538239 THOC2Q8NI27 1593 aaKnown RBP6.49□□□□□ -1.37
LRP6-203ENST00000538239 BIVM-ERCC5R4GMW8 1640 aa6.49□□□□□ -1.37
LRP6-203ENST00000538239 ZNF219Q9P2Y4 722 aaPredicted RBP6.49□□□□□ -1.37
LRP6-203ENST00000538239 PDE4AP27815 886 aa6.49□□□□□ -1.37
LRP6-203ENST00000538239 PCMTD1Q96MG8 357 aaPredicted RBP6.49□□□□□ -1.37
LRP6-203ENST00000538239 LRPPRCP42704 1394 aaKnown RBP6.49□□□□□ -1.37
LRP6-203ENST00000538239 NOS1P29475 1434 aa6.49□□□□□ -1.37
LRP6-203ENST00000538239 PHF14O94880 888 aa6.49□□□□□ -1.37
LRP6-203ENST00000538239 VPS37CA5D8V6 355 aaPredicted RBP6.49□□□□□ -1.37
LRP6-203ENST00000538239 SLC3A2P08195 630 aaKnown RBP6.49□□□□□ -1.37
LRP6-203ENST00000538239 MCM10Q7L590 875 aa6.49□□□□□ -1.37
LRP6-203ENST00000538239 WASLO00401 505 aaPredicted RBP6.48□□□□□ -1.37
LRP6-203ENST00000538239 IPO9Q96P70 1041 aaKnown RBP6.48□□□□□ -1.37
LRP6-203ENST00000538239 MSH6P52701 1360 aa6.48□□□□□ -1.37
LRP6-203ENST00000538239 ZSCAN29Q8IWY8 852 aaPredicted RBP6.48□□□□□ -1.37
LRP6-203ENST00000538239 SAFBQ15424 915 aaKnown RBP eCLIP6.48□□□□□ -1.37
LRP6-203ENST00000538239 ERC1Q8IUD2 1116 aa6.48□□□□□ -1.37
LRP6-203ENST00000538239 CCDC47Q96A33 483 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms