RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 ANKRD50Q9ULJ7 1429 aa7.52□□□□□ -1.21
CHD4-206ENST00000536999 MAPK8IP3Q9UPT6 1336 aa7.52□□□□□ -1.21
CHD4-206ENST00000536999 PARD3Q8TEW0 1356 aa7.51□□□□□ -1.21
CHD4-206ENST00000536999 CCDC184Q52MB2 194 aa7.51□□□□□ -1.21
CHD4-206ENST00000536999 DDX17Q92841 729 aaKnown RBP7.51□□□□□ -1.21
CHD4-206ENST00000536999 PPP1R1BQ9UD71 204 aaPredicted RBP7.51□□□□□ -1.21
CHD4-206ENST00000536999 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.51□□□□□ -1.21
CHD4-206ENST00000536999 PIK3C2BO00750 1634 aa7.51□□□□□ -1.21
CHD4-206ENST00000536999 UNC13BO14795 1591 aa7.5□□□□□ -1.21
CHD4-206ENST00000536999 CCDC141Q6ZP82 1450 aa7.5□□□□□ -1.21
CHD4-206ENST00000536999 PTCH1Q13635 1447 aa7.5□□□□□ -1.21
CHD4-206ENST00000536999 WDR43Q15061 677 aaKnown RBP eCLIP7.49□□□□□ -1.212e-8■■□□□ 14.5
CHD4-206ENST00000536999 GPRASP1Q5JY77 1395 aa7.48□□□□□ -1.21
CHD4-206ENST00000536999 NPC1L1Q9UHC9 1359 aa7.48□□□□□ -1.21
CHD4-206ENST00000536999 CFAP44Q96MT7 982 aa7.48□□□□□ -1.21
CHD4-206ENST00000536999 CGNL1Q0VF96 1302 aa7.48□□□□□ -1.21
CHD4-206ENST00000536999 CHD2O14647 1828 aaKnown RBP7.48□□□□□ -1.21
CHD4-206ENST00000536999 NUP155O75694 1391 aa7.47□□□□□ -1.21
CHD4-206ENST00000536999 CEP152O94986 1710 aa7.47□□□□□ -1.21
CHD4-206ENST00000536999 DCCP43146 1447 aa7.47□□□□□ -1.21
CHD4-206ENST00000536999 EN1Q05925 392 aaPredicted RBP7.47□□□□□ -1.21
CHD4-206ENST00000536999 GOLGA2Q08379 1002 aa7.47□□□□□ -1.21
CHD4-206ENST00000536999 IDI1Q13907 227 aa7.47□□□□□ -1.21
CHD4-206ENST00000536999 PDE3AQ14432 1141 aa7.47□□□□□ -1.21
CHD4-206ENST00000536999 NFKBIBQ15653 356 aa7.47□□□□□ -1.21
CHD4-206ENST00000536999 NPM2Q86SE8 214 aaKnown RBP7.47□□□□□ -1.21
CHD4-206ENST00000536999 SEPT12Q8IYM1 358 aa7.47□□□□□ -1.21
CHD4-206ENST00000536999 EXOC6Q8TAG9 804 aa7.47□□□□□ -1.21
CHD4-206ENST00000536999 UBE2Q2Q8WVN8 375 aa7.47□□□□□ -1.21
CHD4-206ENST00000536999 POLR3GLQ9BT43 218 aa7.47□□□□□ -1.21
CHD4-206ENST00000536999 PLEKHG1Q9ULL1 1385 aa7.46□□□□□ -1.21
CHD4-206ENST00000536999 MST1RQ04912 1400 aa7.46□□□□□ -1.21
CHD4-206ENST00000536999 ARHGAP31Q2M1Z3 1444 aa7.46□□□□□ -1.21
CHD4-206ENST00000536999 LAMC1P11047 1609 aa7.46□□□□□ -1.21
CHD4-206ENST00000536999 EIF2AK4Q9P2K8 1649 aaKnown RBP7.46□□□□□ -1.21
CHD4-206ENST00000536999 ST20-MTHFSA0A0A6YYL1 179 aa7.46□□□□□ -1.22
CHD4-206ENST00000536999 DSG3P32926 999 aa7.46□□□□□ -1.22
CHD4-206ENST00000536999 HDGFP51858 240 aaKnown RBP7.46□□□□□ -1.22
CHD4-206ENST00000536999 KRT27Q7Z3Y8 459 aa7.46□□□□□ -1.22
CHD4-206ENST00000536999 PMFBP1Q8TBY8 1022 aa7.46□□□□□ -1.22
CHD4-206ENST00000536999 TBX22Q9Y458 520 aa7.46□□□□□ -1.22
CHD4-206ENST00000536999 CEP350Q5VT06 3117 aa7.45□□□□□ -1.22
CHD4-206ENST00000536999 A0A0G2JS52 829 aa7.45□□□□□ -1.22
CHD4-206ENST00000536999 E9PSI1 815 aa7.45□□□□□ -1.22
CHD4-206ENST00000536999 ABCB7O75027 752 aa7.45□□□□□ -1.22
CHD4-206ENST00000536999 CHMP4BQ9H444 224 aaKnown RBP7.45□□□□□ -1.22
CHD4-206ENST00000536999 ZNF219Q9P2Y4 722 aaPredicted RBP7.45□□□□□ -1.22
CHD4-206ENST00000536999 KNSTRNQ9Y448 316 aa7.45□□□□□ -1.22
CHD4-206ENST00000536999 ADGRB3O60242 1522 aa7.44□□□□□ -1.22
CHD4-206ENST00000536999 GIGYF1O75420 1035 aaPredicted RBP7.44□□□□□ -1.22
CHD4-206ENST00000536999 ATXN8OSP0DMR3 200 aa7.44□□□□□ -1.22
CHD4-206ENST00000536999 PRKCSHP14314 528 aaPredicted RBP7.44□□□□□ -1.22
CHD4-206ENST00000536999 DCAF11Q8TEB1 546 aa7.44□□□□□ -1.22
CHD4-206ENST00000536999 UTRNP46939 3433 aa7.44□□□□□ -1.22
CHD4-206ENST00000536999 SPHKAPQ2M3C7 1700 aa7.44□□□□□ -1.22
CHD4-206ENST00000536999 PER1O15534 1290 aaPredicted RBP7.43□□□□□ -1.22
CHD4-206ENST00000536999 CT47B1P0C2W7 299 aaPredicted RBP7.43□□□□□ -1.22
CHD4-206ENST00000536999 ZNF326Q5BKZ1 582 aaKnown RBP7.43□□□□□ -1.22
CHD4-206ENST00000536999 UNC5CLQ8IV45 518 aa7.43□□□□□ -1.22
CHD4-206ENST00000536999 SPON1Q9HCB6 807 aa7.43□□□□□ -1.22
CHD4-206ENST00000536999 AMOTL2Q9Y2J4 779 aa7.43□□□□□ -1.22
CHD4-206ENST00000536999 CCDC9Q9Y3X0 531 aaKnown RBP7.43□□□□□ -1.22
CHD4-206ENST00000536999 KDM2BQ8NHM5 1336 aa7.43□□□□□ -1.22
CHD4-206ENST00000536999 GLI3P10071 1580 aa7.42□□□□□ -1.22
CHD4-206ENST00000536999 PIK3R4Q99570 1358 aa7.42□□□□□ -1.22
CHD4-206ENST00000536999 RIMS2Q9UQ26 1411 aa7.42□□□□□ -1.22
CHD4-206ENST00000536999 ARHGEF5Q12774 1597 aa7.42□□□□□ -1.22
CHD4-206ENST00000536999 BRWD3Q6RI45 1802 aa7.41□□□□□ -1.22
CHD4-206ENST00000536999 LAS1LQ9Y4W2 734 aaKnown RBP7.41□□□□□ -1.22
CHD4-206ENST00000536999 KANK1Q14678 1352 aa7.41□□□□□ -1.22
CHD4-206ENST00000536999 PIK3C2GO75747 1445 aa7.41□□□□□ -1.22
CHD4-206ENST00000536999 PRAG1Q86YV5 1406 aa7.41□□□□□ -1.22
CHD4-206ENST00000536999 EZH2Q15910 746 aaKnown RBP7.4□□□□□ -1.22
CHD4-206ENST00000536999 SKOR2Q2VWA4 1001 aaPredicted RBP7.4□□□□□ -1.22
CHD4-206ENST00000536999 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.4□□□□□ -1.22
CHD4-206ENST00000536999 IL27Q8NEV9 243 aa7.4□□□□□ -1.22
CHD4-206ENST00000536999 ANP32BQ92688 251 aaKnown RBP7.4□□□□□ -1.22
CHD4-206ENST00000536999 CRBNQ96SW2 442 aa7.4□□□□□ -1.22
CHD4-206ENST00000536999 SLC52A1Q9NWF4 448 aa7.4□□□□□ -1.22
CHD4-206ENST00000536999 SOS2Q07890 1332 aaPredicted RBP7.4□□□□□ -1.22
CHD4-206ENST00000536999 ZFYVE9O95405 1425 aa7.4□□□□□ -1.22
CHD4-206ENST00000536999 MYOM2P54296 1465 aa7.4□□□□□ -1.22
CHD4-206ENST00000536999 CAMTA1Q9Y6Y1 1673 aa7.39□□□□□ -1.23
CHD4-206ENST00000536999 TRPM2O94759 1503 aa7.39□□□□□ -1.23
CHD4-206ENST00000536999 ADAMTS13Q76LX8 1427 aa7.39□□□□□ -1.23
CHD4-206ENST00000536999 ERBINQ96RT1 1412 aa7.39□□□□□ -1.23
CHD4-206ENST00000536999 DDX11L8A8MPP1 907 aa7.39□□□□□ -1.23
CHD4-206ENST00000536999 NBPF14Q5TI25 921 aa7.39□□□□□ -1.23
CHD4-206ENST00000536999 RWDD1Q9H446 243 aaPredicted RBP7.39□□□□□ -1.23
CHD4-206ENST00000536999 PANK3Q9H999 370 aa7.39□□□□□ -1.23
CHD4-206ENST00000536999 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.38□□□□□ -1.23
CHD4-206ENST00000536999 E9PCH4 1651 aa7.38□□□□□ -1.23
CHD4-206ENST00000536999 GOLGA6L3A6NEY3 463 aa7.38□□□□□ -1.23
CHD4-206ENST00000536999 KCNQ2O43526 872 aa7.38□□□□□ -1.23
CHD4-206ENST00000536999 RRP9O43818 475 aaKnown RBP7.38□□□□□ -1.23
CHD4-206ENST00000536999 CHGAP10645 457 aaKnown RBP7.38□□□□□ -1.23
CHD4-206ENST00000536999 MRE11P49959 708 aa7.38□□□□□ -1.23
CHD4-206ENST00000536999 SLFN5Q08AF3 891 aa7.38□□□□□ -1.23
CHD4-206ENST00000536999 POLA2Q14181 598 aa7.38□□□□□ -1.23
CHD4-206ENST00000536999 DUSP27Q5VZP5 1158 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms