RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 RUNDC1Q96C34 613 aa29.95■■■□□ 2.38
HMGA2-206ENST00000536545 PNPLA6Q8IY17 1366 aa29.94■■■□□ 2.38
HMGA2-206ENST00000536545 NKTRP30414 1462 aaKnown RBP29.93■■■□□ 2.38
HMGA2-206ENST00000536545 SLFN5Q08AF3 891 aa29.92■■■□□ 2.38
HMGA2-206ENST00000536545 TRMT2AQ8IZ69 625 aaKnown RBP29.91■■■□□ 2.38
HMGA2-206ENST00000536545 SETD1BQ9UPS6 1966 aaKnown RBP29.9■■■□□ 2.38
HMGA2-206ENST00000536545 NME9Q86XW9 330 aa29.87■■■□□ 2.37
HMGA2-206ENST00000536545 ZNF692Q9BU19 519 aaPredicted RBP29.87■■■□□ 2.37
HMGA2-206ENST00000536545 PLEKHG3A1L390 1219 aa29.86■■■□□ 2.37
HMGA2-206ENST00000536545 PHF23Q9BUL5 403 aaPredicted RBP29.86■■■□□ 2.37
HMGA2-206ENST00000536545 U2AF1L5P0DN76 240 aaPredicted RBP29.85■■■□□ 2.37
HMGA2-206ENST00000536545 U2AF1Q01081 240 aaKnown RBP eCLIP29.85■■■□□ 2.378e-8■■□□□ 13.6
HMGA2-206ENST00000536545 AATKQ6ZMQ8 1374 aa29.85■■■□□ 2.37
HMGA2-206ENST00000536545 E9PSI1 815 aa29.84■■■□□ 2.37
HMGA2-206ENST00000536545 NCBP3Q53F19 620 aaKnown RBP29.84■■■□□ 2.37
HMGA2-206ENST00000536545 WWC1Q8IX03 1113 aa29.84■■■□□ 2.37
HMGA2-206ENST00000536545 TCP11L2Q8N4U5 519 aa29.84■■■□□ 2.37
HMGA2-206ENST00000536545 SPINK5Q9NQ38 1064 aaPredicted RBP29.84■■■□□ 2.37
HMGA2-206ENST00000536545 ANKLE2Q86XL3 938 aa29.83■■■□□ 2.37
HMGA2-206ENST00000536545 DMRT2Q9Y5R5 561 aa29.82■■■□□ 2.36
HMGA2-206ENST00000536545 CHD2O14647 1828 aaKnown RBP29.82■■■□□ 2.36
HMGA2-206ENST00000536545 CDK12Q9NYV4 1490 aaPredicted RBP29.82■■■□□ 2.36
HMGA2-206ENST00000536545 USP6P35125 1406 aa29.82■■■□□ 2.36
HMGA2-206ENST00000536545 MAP2P11137 1827 aaKnown RBP29.82■■■□□ 2.36
HMGA2-206ENST00000536545 POLKQ9UBT6 870 aa29.82■■■□□ 2.36
HMGA2-206ENST00000536545 KCNA6P17658 529 aa29.81■■■□□ 2.36
HMGA2-206ENST00000536545 B4GALNT3Q6L9W6 998 aa29.81■■■□□ 2.36
HMGA2-206ENST00000536545 ACEP12821 1306 aa29.8■■■□□ 2.36
HMGA2-206ENST00000536545 CCDC27Q2M243 656 aa29.8■■■□□ 2.36
HMGA2-206ENST00000536545 ZRANB1Q9UGI0 708 aa29.8■■■□□ 2.36
HMGA2-206ENST00000536545 FMN2Q9NZ56 1722 aa29.79■■■□□ 2.36
HMGA2-206ENST00000536545 ANKARQ7Z5J8 1434 aa29.79■■■□□ 2.36
HMGA2-206ENST00000536545 DIAPH1O60610 1272 aaKnown RBP29.79■■■□□ 2.36
HMGA2-206ENST00000536545 SSH2Q76I76 1423 aa29.78■■■□□ 2.36
HMGA2-206ENST00000536545 COG3Q96JB2 828 aa29.77■■■□□ 2.36
HMGA2-206ENST00000536545 PLEKHF1Q96S99 279 aa29.77■■■□□ 2.36
HMGA2-206ENST00000536545 TSHZ2Q9NRE2 1034 aa29.77■■■□□ 2.36
HMGA2-206ENST00000536545 RRP7AQ9Y3A4 280 aaKnown RBP29.77■■■□□ 2.36
HMGA2-206ENST00000536545 OVOS2A0A0J9YW53 1432 aa29.77■■■□□ 2.36
HMGA2-206ENST00000536545 OVOS2Q6IE36 1432 aa29.77■■■□□ 2.36
HMGA2-206ENST00000536545 NALCNQ8IZF0 1738 aa29.77■■■□□ 2.36
HMGA2-206ENST00000536545 U2SURPO15042 1029 aaKnown RBP29.77■■■□□ 2.36
HMGA2-206ENST00000536545 TTC21BQ7Z4L5 1316 aa29.76■■■□□ 2.36
HMGA2-206ENST00000536545 NUTM2FA1L443 756 aa29.75■■■□□ 2.35
HMGA2-206ENST00000536545 RGPD8O14715 1765 aaPredicted RBP29.75■■■□□ 2.35
HMGA2-206ENST00000536545 LRRC7Q96NW7 1537 aa29.75■■■□□ 2.35
HMGA2-206ENST00000536545 FBLN1P23142 703 aa29.75■■■□□ 2.35
HMGA2-206ENST00000536545 NPHP4O75161 1426 aaPredicted RBP29.72■■■□□ 2.35
HMGA2-206ENST00000536545 WDR63Q8IWG1 891 aa29.72■■■□□ 2.35
HMGA2-206ENST00000536545 NEUROD2Q15784 382 aa29.72■■■□□ 2.35
HMGA2-206ENST00000536545 EMILIN1Q9Y6C2 1016 aa29.72■■■□□ 2.35
HMGA2-206ENST00000536545 EXOC6Q8TAG9 804 aa29.7■■■□□ 2.35
HMGA2-206ENST00000536545 PLIN1O60240 522 aa29.69■■■□□ 2.34
HMGA2-206ENST00000536545 MAPK8IP3Q9UPT6 1336 aa29.67■■■□□ 2.34
HMGA2-206ENST00000536545 PPM1GO15355 546 aaPredicted RBP29.67■■■□□ 2.34
HMGA2-206ENST00000536545 CCDC136Q96JN2 1154 aa29.67■■■□□ 2.34
HMGA2-206ENST00000536545 USP31Q70CQ4 1352 aa29.66■■■□□ 2.34
HMGA2-206ENST00000536545 TTC21AQ8NDW8 1320 aa29.66■■■□□ 2.34
HMGA2-206ENST00000536545 NWD1Q149M9 1564 aa29.65■■■□□ 2.34
HMGA2-206ENST00000536545 IL13P35225 146 aa29.64■■■□□ 2.34
HMGA2-206ENST00000536545 TMPOP42166 694 aaKnown RBP29.64■■■□□ 2.34
HMGA2-206ENST00000536545 RSPH6AQ9H0K4 717 aa29.64■■■□□ 2.34
HMGA2-206ENST00000536545 PNNQ9H307 717 aaKnown RBP29.64■■■□□ 2.34
HMGA2-206ENST00000536545 FCHSD2O94868 740 aa29.64■■■□□ 2.34
HMGA2-206ENST00000536545 PMFBP1Q8TBY8 1022 aa29.63■■■□□ 2.33
HMGA2-206ENST00000536545 PIK3C2AO00443 1686 aa29.62■■■□□ 2.33
HMGA2-206ENST00000536545 RRS1Q15050 365 aaKnown RBP29.62■■■□□ 2.33
HMGA2-206ENST00000536545 ADGRL3Q9HAR2 1447 aa29.62■■■□□ 2.33
HMGA2-206ENST00000536545 PEAK1Q9H792 1746 aa29.6■■■□□ 2.33
HMGA2-206ENST00000536545 USP54Q70EL1 1684 aa29.6■■■□□ 2.33
HMGA2-206ENST00000536545 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.59■■■□□ 2.33
HMGA2-206ENST00000536545 CRBNQ96SW2 442 aa29.59■■■□□ 2.33
HMGA2-206ENST00000536545 TRIM35Q9UPQ4 493 aa29.59■■■□□ 2.33
HMGA2-206ENST00000536545 C20orf194Q5TEA3 1177 aa29.59■■■□□ 2.33
HMGA2-206ENST00000536545 NGDNQ8NEJ9 315 aaKnown RBP29.59■■■□□ 2.33
HMGA2-206ENST00000536545 PRKAR2BP31323 418 aa29.57■■■□□ 2.32
HMGA2-206ENST00000536545 MYH16Q9H6N6 1097 aa29.57■■■□□ 2.32
HMGA2-206ENST00000536545 MARF1Q9Y4F3 1742 aaKnown RBP29.55■■■□□ 2.32
HMGA2-206ENST00000536545 IL16Q14005 1332 aa29.54■■■□□ 2.32
HMGA2-206ENST00000536545 BCAR3O75815 825 aa29.52■■■□□ 2.32
HMGA2-206ENST00000536545 RGPD1P0DJD0 1748 aa29.52■■■□□ 2.32
HMGA2-206ENST00000536545 RIPK4P57078 832 aa29.52■■■□□ 2.32
HMGA2-206ENST00000536545 HMOX1P09601 288 aa29.51■■■□□ 2.31
HMGA2-206ENST00000536545 FANCIQ9NVI1 1328 aa29.49■■■□□ 2.31
HMGA2-206ENST00000536545 NFE2L2Q16236 605 aa29.48■■■□□ 2.31
HMGA2-206ENST00000536545 EIF4A2Q14240 407 aaKnown RBP29.47■■■□□ 2.31
HMGA2-206ENST00000536545 PHACTR3Q96KR7 559 aa29.47■■■□□ 2.31
HMGA2-206ENST00000536545 NEFMP07197 916 aa29.47■■■□□ 2.31
HMGA2-206ENST00000536545 RARSP54136 660 aaKnown RBP29.47■■■□□ 2.31
HMGA2-206ENST00000536545 RBM33Q96EV2 1170 aaKnown RBP29.46■■■□□ 2.31
HMGA2-206ENST00000536545 PHF8Q9UPP1 1060 aa29.45■■■□□ 2.31
HMGA2-206ENST00000536545 SBNO1A3KN83 1393 aa29.45■■■□□ 2.3
HMGA2-206ENST00000536545 MAP3K19Q56UN5 1328 aa29.45■■■□□ 2.3
HMGA2-206ENST00000536545 CT47B1P0C2W7 299 aaPredicted RBP29.44■■■□□ 2.3
HMGA2-206ENST00000536545 TSR2Q969E8 191 aaKnown RBP29.42■■■□□ 2.3
HMGA2-206ENST00000536545 FLT4P35916 1363 aa29.42■■■□□ 2.3
HMGA2-206ENST00000536545 DLG5Q8TDM6 1919 aa29.4■■■□□ 2.3
HMGA2-206ENST00000536545 PDE3AQ14432 1141 aa29.4■■■□□ 2.3
HMGA2-206ENST00000536545 HSP90AB2PQ58FF8 381 aa29.4■■■□□ 2.3
HMGA2-206ENST00000536545 ARHGEF10O15013 1369 aa29.39■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms