RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 ADGRB2O60241 1585 aa7.95□□□□□ -1.14
CHD4-205ENST00000536301 SLC4A1APQ9BWU0 796 aaKnown RBP7.94□□□□□ -1.14
CHD4-205ENST00000536301 PRR36Q9H6K5 1346 aa7.94□□□□□ -1.14
CHD4-205ENST00000536301 CHRNA2Q15822 529 aa7.93□□□□□ -1.14
CHD4-205ENST00000536301 CFAP70Q5T0N1 1121 aa7.93□□□□□ -1.14
CHD4-205ENST00000536301 SPATA31A1Q5TZJ5 1347 aa7.93□□□□□ -1.14
CHD4-205ENST00000536301 PRAM1Q96QH2 718 aa7.92□□□□□ -1.14
CHD4-205ENST00000536301 PDGFDQ9GZP0 370 aaPredicted RBP7.92□□□□□ -1.14
CHD4-205ENST00000536301 STRN4Q9NRL3 753 aa7.92□□□□□ -1.14
CHD4-205ENST00000536301 KIAA0232Q92628 1395 aa7.92□□□□□ -1.14
CHD4-205ENST00000536301 NRKQ7Z2Y5 1582 aa7.92□□□□□ -1.14
CHD4-205ENST00000536301 PHRF1Q9P1Y6 1649 aaKnown RBP7.92□□□□□ -1.14
CHD4-205ENST00000536301 FAM196AQ6ZSG2 479 aa7.91□□□□□ -1.14
CHD4-205ENST00000536301 HIRIP3Q9BW71 556 aaPredicted RBP7.91□□□□□ -1.14
CHD4-205ENST00000536301 ANO8Q9HCE9 1232 aaPredicted RBP7.91□□□□□ -1.14
CHD4-205ENST00000536301 PRDM11Q9NQV5 511 aa7.91□□□□□ -1.14
CHD4-205ENST00000536301 USP35Q9P2H5 1018 aa7.91□□□□□ -1.14
CHD4-205ENST00000536301 ACIN1Q9UKV3 1341 aaKnown RBP7.91□□□□□ -1.14
CHD4-205ENST00000536301 ANKRD30BQ9BXX2 1392 aa7.91□□□□□ -1.14
CHD4-205ENST00000536301 ANKARQ7Z5J8 1434 aa7.91□□□□□ -1.14
CHD4-205ENST00000536301 CASZ1Q86V15 1759 aa7.91□□□□□ -1.14
CHD4-205ENST00000536301 MYOM1P52179 1685 aa7.9□□□□□ -1.14
CHD4-205ENST00000536301 PARD3Q8TEW0 1356 aa7.9□□□□□ -1.14
CHD4-205ENST00000536301 NINLQ9Y2I6 1382 aa7.9□□□□□ -1.14
CHD4-205ENST00000536301 KCNQ2O43526 872 aa7.9□□□□□ -1.14
CHD4-205ENST00000536301 PTF1AQ7RTS3 328 aa7.9□□□□□ -1.14
CHD4-205ENST00000536301 ZNF784Q8NCA9 323 aaPredicted RBP7.9□□□□□ -1.14
CHD4-205ENST00000536301 SIRT1Q96EB6 747 aa7.9□□□□□ -1.14
CHD4-205ENST00000536301 C14orf93Q9H972 538 aaKnown RBP7.9□□□□□ -1.14
CHD4-205ENST00000536301 SPON1Q9HCB6 807 aa7.9□□□□□ -1.14
CHD4-205ENST00000536301 PPP1R1BQ9UD71 204 aaPredicted RBP7.9□□□□□ -1.14
CHD4-205ENST00000536301 SBF2Q86WG5 1849 aa7.89□□□□□ -1.15
CHD4-205ENST00000536301 MINK1Q8N4C8 1332 aaPredicted RBP7.89□□□□□ -1.15
CHD4-205ENST00000536301 ZC3H6P61129 1189 aaKnown RBP7.89□□□□□ -1.15
CHD4-205ENST00000536301 NUTM2GQ5VZR2 741 aa7.89□□□□□ -1.15
CHD4-205ENST00000536301 DLC1Q96QB1 1528 aa7.88□□□□□ -1.15
CHD4-205ENST00000536301 SSH2Q76I76 1423 aa7.88□□□□□ -1.15
CHD4-205ENST00000536301 CHD4Q14839 1912 aa7.88□□□□□ -1.15
CHD4-205ENST00000536301 DHX57Q6P158 1386 aaKnown RBP7.88□□□□□ -1.15
CHD4-205ENST00000536301 SENP3-EIF4A1A0A087X0R7 540 aa7.88□□□□□ -1.15
CHD4-205ENST00000536301 PAK3O75914 559 aaPredicted RBP7.88□□□□□ -1.15
CHD4-205ENST00000536301 LARP1Q6PKG0 1096 aaKnown RBP7.88□□□□□ -1.15
CHD4-205ENST00000536301 PEAK1Q9H792 1746 aa7.88□□□□□ -1.15
CHD4-205ENST00000536301 ADGRB1O14514 1584 aa7.88□□□□□ -1.15
CHD4-205ENST00000536301 TULP4Q9NRJ4 1543 aa7.88□□□□□ -1.15
CHD4-205ENST00000536301 GPRASP1Q5JY77 1395 aa7.87□□□□□ -1.15
CHD4-205ENST00000536301 LMO7Q8WWI1 1683 aa7.87□□□□□ -1.15
CHD4-205ENST00000536301 NBPF8Q3BBV2 869 aa7.87□□□□□ -1.15
CHD4-205ENST00000536301 NBPF14Q5TI25 921 aa7.87□□□□□ -1.15
CHD4-205ENST00000536301 POGKQ9P215 609 aa7.87□□□□□ -1.15
CHD4-205ENST00000536301 TRAK1Q9UPV9 953 aa7.87□□□□□ -1.15
CHD4-205ENST00000536301 ZBTB7AO95365 584 aa7.86□□□□□ -1.15
CHD4-205ENST00000536301 PTGER2P43116 358 aa7.86□□□□□ -1.15
CHD4-205ENST00000536301 PDE3BQ13370 1112 aa7.86□□□□□ -1.15
CHD4-205ENST00000536301 BARGINQ6ZT62 677 aa7.86□□□□□ -1.15
CHD4-205ENST00000536301 NGDNQ8NEJ9 315 aaKnown RBP7.86□□□□□ -1.15
CHD4-205ENST00000536301 PARP4Q9UKK3 1724 aaKnown RBP7.86□□□□□ -1.15
CHD4-205ENST00000536301 PROM2Q8N271 834 aa7.85□□□□□ -1.15
CHD4-205ENST00000536301 MPHOSPH9Q99550 1183 aa7.85□□□□□ -1.15
CHD4-205ENST00000536301 ATF5Q9Y2D1 282 aaPredicted RBP7.85□□□□□ -1.15
CHD4-205ENST00000536301 ATP7BP35670 1465 aa7.85□□□□□ -1.15
CHD4-205ENST00000536301 CEP350Q5VT06 3117 aa7.85□□□□□ -1.15
CHD4-205ENST00000536301 RGPD3A6NKT7 1758 aaPredicted RBP7.84□□□□□ -1.15
CHD4-205ENST00000536301 RGPD4Q7Z3J3 1758 aa7.84□□□□□ -1.15
CHD4-205ENST00000536301 WASLO00401 505 aaPredicted RBP7.84□□□□□ -1.15
CHD4-205ENST00000536301 C1QTNF8P60827 252 aa7.84□□□□□ -1.15
CHD4-205ENST00000536301 IFFO2Q5TF58 517 aa7.84□□□□□ -1.15
CHD4-205ENST00000536301 TCP11L2Q8N4U5 519 aa7.84□□□□□ -1.15
CHD4-205ENST00000536301 LRRC37A3O60309 1634 aa7.84□□□□□ -1.15
CHD4-205ENST00000536301 ITSN1Q15811 1721 aa7.83□□□□□ -1.16
CHD4-205ENST00000536301 DCAF8L1A6NGE4 600 aa7.83□□□□□ -1.16
CHD4-205ENST00000536301 EVA1CP58658 441 aa7.83□□□□□ -1.16
CHD4-205ENST00000536301 FHDC1Q9C0D6 1143 aaPredicted RBP7.83□□□□□ -1.16
CHD4-205ENST00000536301 ARHGEF28Q8N1W1 1705 aaKnown RBP7.83□□□□□ -1.16
CHD4-205ENST00000536301 TOPAZ1Q8N9V7 1692 aa7.83□□□□□ -1.16
CHD4-205ENST00000536301 COL5A2P05997 1499 aaPredicted RBP7.82□□□□□ -1.16
CHD4-205ENST00000536301 NUDT16Q96DE0 195 aaKnown RBP7.82□□□□□ -1.16
CHD4-205ENST00000536301 SYT17Q9BSW7 474 aa7.82□□□□□ -1.16
CHD4-205ENST00000536301 WNK3Q9BYP7 1800 aa7.82□□□□□ -1.16
CHD4-205ENST00000536301 GOLGB1Q14789 3259 aaKnown RBP7.81□□□□□ -1.16
CHD4-205ENST00000536301 OVOS2A0A0G2JMS6 1433 aa7.81□□□□□ -1.16
CHD4-205ENST00000536301 OVOS2A0A0J9YW53 1432 aa7.81□□□□□ -1.16
CHD4-205ENST00000536301 OVOS2Q6IE36 1432 aa7.81□□□□□ -1.16
CHD4-205ENST00000536301 SGIP1Q9BQI5 828 aa7.81□□□□□ -1.16
CHD4-205ENST00000536301 USP19O94966 1318 aa7.8□□□□□ -1.16
CHD4-205ENST00000536301 ACEP12821 1306 aa7.8□□□□□ -1.16
CHD4-205ENST00000536301 COL18A1P39060 1754 aa7.8□□□□□ -1.16
CHD4-205ENST00000536301 RGPD5Q99666 1765 aa7.8□□□□□ -1.16
CHD4-205ENST00000536301 ZBTB7CA1YPR0 619 aa7.8□□□□□ -1.16
CHD4-205ENST00000536301 PLSCR1O15162 318 aa7.8□□□□□ -1.16
CHD4-205ENST00000536301 MARCH10Q8NA82 808 aaPredicted RBP7.8□□□□□ -1.16
CHD4-205ENST00000536301 BCL11BQ9C0K0 894 aaPredicted RBP7.8□□□□□ -1.16
CHD4-205ENST00000536301 CPDO75976 1380 aa7.8□□□□□ -1.16
CHD4-205ENST00000536301 EIF3AQ14152 1382 aaKnown RBP7.8□□□□□ -1.16
CHD4-205ENST00000536301 AKAP12Q02952 1782 aa7.79□□□□□ -1.16
CHD4-205ENST00000536301 KAT6BQ8WYB5 2073 aa7.79□□□□□ -1.16
CHD4-205ENST00000536301 SHANK3Q9BYB0 1731 aa7.79□□□□□ -1.16
CHD4-205ENST00000536301 THRAP3Q9Y2W1 955 aaKnown RBP7.79□□□□□ -1.16
CHD4-205ENST00000536301 POLR3AO14802 1390 aaPredicted RBP7.79□□□□□ -1.16
CHD4-205ENST00000536301 CRB1P82279 1406 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms