RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 MAN1A2O60476 641 aa8.4□□□□□ -1.06
YBX3-205ENST00000536107 MS4A1P11836 297 aa8.4□□□□□ -1.06
YBX3-205ENST00000536107 UNC93B1Q9H1C4 597 aa8.4□□□□□ -1.06
YBX3-205ENST00000536107 ADAMTS8Q9UP79 889 aa8.4□□□□□ -1.06
YBX3-205ENST00000536107 PTPRNQ16849 979 aa8.38□□□□□ -1.07
YBX3-205ENST00000536107 BAP1Q92560 729 aa8.38□□□□□ -1.07
YBX3-205ENST00000536107 EVA1BQ9NVM1 165 aa8.38□□□□□ -1.07
YBX3-205ENST00000536107 NESP48681 1621 aa8.37□□□□□ -1.07
YBX3-205ENST00000536107 IGHA1P01876 353 aa8.37□□□□□ -1.07
YBX3-205ENST00000536107 LINC01559Q495D7 138 aa8.37□□□□□ -1.07
YBX3-205ENST00000536107 ZNF511Q8NB15 262 aa8.37□□□□□ -1.07
YBX3-205ENST00000536107 KRT76Q01546 638 aa8.36□□□□□ -1.07
YBX3-205ENST00000536107 GPIHBP1Q8IV16 184 aa8.36□□□□□ -1.07
YBX3-205ENST00000536107 MDM2Q00987 491 aaPredicted RBP8.35□□□□□ -1.07
YBX3-205ENST00000536107 KCNH2Q12809 1159 aa8.35□□□□□ -1.07
YBX3-205ENST00000536107 DNMT3AQ9Y6K1 912 aaPredicted RBP8.35□□□□□ -1.07
YBX3-205ENST00000536107 MAP2K5Q13163 448 aa8.34□□□□□ -1.07
YBX3-205ENST00000536107 C6orf118Q5T5N4 469 aa8.33□□□□□ -1.08
YBX3-205ENST00000536107 CYB5RLQ6IPT4 315 aa8.33□□□□□ -1.08
YBX3-205ENST00000536107 FAM174AQ8TBP5 190 aa8.33□□□□□ -1.08
YBX3-205ENST00000536107 CNTNAP3BQ96NU0 1288 aa8.33□□□□□ -1.08
YBX3-205ENST00000536107 CDK15Q96Q40 435 aa8.33□□□□□ -1.08
YBX3-205ENST00000536107 CNTNAP3Q9BZ76 1288 aa8.33□□□□□ -1.08
YBX3-205ENST00000536107 C6orf229H3BNL8 230 aa8.32□□□□□ -1.08
YBX3-205ENST00000536107 ZIC2O95409 532 aaPredicted RBP8.32□□□□□ -1.08
YBX3-205ENST00000536107 GPAT2Q6NUI2 795 aa8.32□□□□□ -1.08
YBX3-205ENST00000536107 NUTM1Q86Y26 1132 aa8.32□□□□□ -1.08
YBX3-205ENST00000536107 GPR161Q8N6U8 529 aaKnown RBP8.32□□□□□ -1.08
YBX3-205ENST00000536107 ZFAND3Q9H8U3 227 aa8.32□□□□□ -1.08
YBX3-205ENST00000536107 PCDHGC3Q9UN70 934 aa8.32□□□□□ -1.08
YBX3-205ENST00000536107 SMARCA2P51531 1590 aa8.31□□□□□ -1.08
YBX3-205ENST00000536107 FDX1P10109 184 aa8.31□□□□□ -1.08
YBX3-205ENST00000536107 FOXK2Q01167 660 aa8.31□□□□□ -1.08
YBX3-205ENST00000536107 ITPKCQ96DU7 683 aa8.31□□□□□ -1.08
YBX3-205ENST00000536107 THOC2Q8NI27 1593 aaKnown RBP8.31□□□□□ -1.08
YBX3-205ENST00000536107 IRF6O14896 467 aa8.3□□□□□ -1.08
YBX3-205ENST00000536107 UPP2O95045 317 aa8.3□□□□□ -1.08
YBX3-205ENST00000536107 ZNF385CQ66K41 422 aaPredicted RBP8.3□□□□□ -1.08
YBX3-205ENST00000536107 FAM217BQ9NTX9 383 aaPredicted RBP8.3□□□□□ -1.08
YBX3-205ENST00000536107 DNMT3LQ9UJW3 386 aa8.3□□□□□ -1.08
YBX3-205ENST00000536107 SOS2Q07890 1332 aaPredicted RBP8.29□□□□□ -1.08
YBX3-205ENST00000536107 BMP2P12643 396 aa8.29□□□□□ -1.08
YBX3-205ENST00000536107 NR5A1Q13285 461 aa8.29□□□□□ -1.08
YBX3-205ENST00000536107 LINC00528Q8N1L1 170 aa8.29□□□□□ -1.08
YBX3-205ENST00000536107 AMER1Q5JTC6 1135 aaPredicted RBP8.28□□□□□ -1.08
YBX3-205ENST00000536107 XP32Q5T750 250 aa8.28□□□□□ -1.08
YBX3-205ENST00000536107 DESI1Q6ICB0 168 aa8.28□□□□□ -1.08
YBX3-205ENST00000536107 KANK3Q6NY19 840 aa8.28□□□□□ -1.08
YBX3-205ENST00000536107 MEIOBQ8N635 442 aa8.28□□□□□ -1.08
YBX3-205ENST00000536107 GPCPD1Q9NPB8 672 aa8.28□□□□□ -1.08
YBX3-205ENST00000536107 BAZ1AQ9NRL2 1556 aaPredicted RBP8.27□□□□□ -1.09
YBX3-205ENST00000536107 NCAPD3P42695 1498 aa8.27□□□□□ -1.09
YBX3-205ENST00000536107 IRS1P35568 1242 aa8.27□□□□□ -1.09
YBX3-205ENST00000536107 SVOPQ8N4V2 548 aa8.27□□□□□ -1.09
YBX3-205ENST00000536107 NANOS1Q8WY41 292 aaKnown RBP8.27□□□□□ -1.09
YBX3-205ENST00000536107 NR3C2P08235 984 aa8.26□□□□□ -1.09
YBX3-205ENST00000536107 CLCN1P35523 988 aa8.26□□□□□ -1.09
YBX3-205ENST00000536107 PRR7Q8TB68 274 aa8.26□□□□□ -1.09
YBX3-205ENST00000536107 COL25A1Q9BXS0 654 aaPredicted RBP8.26□□□□□ -1.09
YBX3-205ENST00000536107 MINK1Q8N4C8 1332 aaPredicted RBP8.26□□□□□ -1.09
YBX3-205ENST00000536107 ARHGEF15O94989 841 aa8.25□□□□□ -1.09
YBX3-205ENST00000536107 SLURP2P0DP57 97 aa8.25□□□□□ -1.09
YBX3-205ENST00000536107 ARID5BQ14865 1188 aa8.25□□□□□ -1.09
YBX3-205ENST00000536107 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.25□□□□□ -1.091e-6■■■■■ 28.8
YBX3-205ENST00000536107 PDS5BQ9NTI5 1447 aa8.24□□□□□ -1.09
YBX3-205ENST00000536107 SPTLC1O15269 473 aa8.24□□□□□ -1.09
YBX3-205ENST00000536107 GRM5P41594 1212 aa8.24□□□□□ -1.09
YBX3-205ENST00000536107 RIMBP3CA6NJZ7 1639 aa8.24□□□□□ -1.09
YBX3-205ENST00000536107 RIMBP3BA6NNM3 1639 aa8.24□□□□□ -1.09
YBX3-205ENST00000536107 RIMBP3Q9UFD9 1639 aa8.24□□□□□ -1.09
YBX3-205ENST00000536107 SPDYE5A6NIY4 337 aa8.23□□□□□ -1.09
YBX3-205ENST00000536107 MARSP56192 900 aaKnown RBP8.22□□□□□ -1.09
YBX3-205ENST00000536107 PTSQ03393 145 aa8.22□□□□□ -1.09
YBX3-205ENST00000536107 RNFT1Q5M7Z0 435 aa8.22□□□□□ -1.09
YBX3-205ENST00000536107 WHAMMQ8TF30 809 aa8.22□□□□□ -1.09
YBX3-205ENST00000536107 FOXJ1Q92949 421 aa8.22□□□□□ -1.09
YBX3-205ENST00000536107 SCARF2Q96GP6 870 aaPredicted RBP8.22□□□□□ -1.09
YBX3-205ENST00000536107 TSEN34Q9BSV6 310 aaKnown RBP8.22□□□□□ -1.09
YBX3-205ENST00000536107 TTLL8A6PVC2 850 aa8.2□□□□□ -1.1
YBX3-205ENST00000536107 CTHP32929 405 aa8.2□□□□□ -1.1
YBX3-205ENST00000536107 MTMR2Q13614 643 aa8.2□□□□□ -1.1
YBX3-205ENST00000536107 LYPD8Q6UX82 237 aa8.2□□□□□ -1.1
YBX3-205ENST00000536107 CCDC102AQ96A19 550 aa8.2□□□□□ -1.1
YBX3-205ENST00000536107 DCAF1Q9Y4B6 1507 aa8.19□□□□□ -1.1
YBX3-205ENST00000536107 ADAM23O75077 832 aa8.19□□□□□ -1.1
YBX3-205ENST00000536107 SPIRE2Q8WWL2 714 aa8.19□□□□□ -1.1
YBX3-205ENST00000536107 ARHGEF11O15085 1522 aa8.19□□□□□ -1.1
YBX3-205ENST00000536107 NDUFV2P19404 249 aa8.18□□□□□ -1.1
YBX3-205ENST00000536107 C4orf48Q5BLP8 95 aa8.18□□□□□ -1.1
YBX3-205ENST00000536107 CCDC155Q8N6L0 562 aa8.18□□□□□ -1.1
YBX3-205ENST00000536107 MOXD2PA6NHM9 499 aa8.17□□□□□ -1.1
YBX3-205ENST00000536107 RTN4Q9NQC3 1192 aaKnown RBP8.17□□□□□ -1.1
YBX3-205ENST00000536107 ATAD2BQ9ULI0 1458 aa8.17□□□□□ -1.1
YBX3-205ENST00000536107 F12P00748 615 aaPredicted RBP8.16□□□□□ -1.1
YBX3-205ENST00000536107 ZCCHC6Q5VYS8 1495 aaKnown RBP8.16□□□□□ -1.1
YBX3-205ENST00000536107 BPHLQ86WA6 291 aaPredicted RBP8.16□□□□□ -1.1
YBX3-205ENST00000536107 KRI1Q8N9T8 703 aaKnown RBP8.16□□□□□ -1.1
YBX3-205ENST00000536107 KRTAP4-8Q9BYQ9 185 aa8.16□□□□□ -1.1
YBX3-205ENST00000536107 MRC2Q9UBG0 1479 aa8.15□□□□□ -1.1
YBX3-205ENST00000536107 SLC35F4A4IF30 521 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms