RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ITSN1Q15811 1721 aa18.98■□□□□ 0.63
TNFRSF1A-207ENST00000535958 WASLO00401 505 aaPredicted RBP18.98■□□□□ 0.63
TNFRSF1A-207ENST00000535958 BAG6P46379 1132 aa18.98■□□□□ 0.63
TNFRSF1A-207ENST00000535958 FAM98CQ17RN3 349 aaKnown RBP18.98■□□□□ 0.63
TNFRSF1A-207ENST00000535958 ONECUT3O60422 494 aaPredicted RBP18.97■□□□□ 0.63
TNFRSF1A-207ENST00000535958 STAC3Q96MF2 364 aa18.97■□□□□ 0.63
TNFRSF1A-207ENST00000535958 PRDM11Q9NQV5 511 aa18.95■□□□□ 0.62
TNFRSF1A-207ENST00000535958 PRR36Q9H6K5 1346 aa18.95■□□□□ 0.62
TNFRSF1A-207ENST00000535958 ARHGEF28Q8N1W1 1705 aaKnown RBP18.93■□□□□ 0.62
TNFRSF1A-207ENST00000535958 RGPD1P0DJD0 1748 aa18.92■□□□□ 0.62
TNFRSF1A-207ENST00000535958 ATP7BP35670 1465 aa18.9■□□□□ 0.62
TNFRSF1A-207ENST00000535958 CRYBG1Q9Y4K1 1723 aa18.9■□□□□ 0.62
TNFRSF1A-207ENST00000535958 NUDT16Q96DE0 195 aaKnown RBP18.89■□□□□ 0.61
TNFRSF1A-207ENST00000535958 SPATA31A5Q5VU36 1347 aa18.89■□□□□ 0.61
TNFRSF1A-207ENST00000535958 SPATA31A7Q8IWB4 1347 aa18.89■□□□□ 0.61
TNFRSF1A-207ENST00000535958 LRP5O75197 1615 aa18.89■□□□□ 0.61
TNFRSF1A-207ENST00000535958 PSDA5PKW4 1024 aaPredicted RBP18.87■□□□□ 0.61
TNFRSF1A-207ENST00000535958 KIAA0232Q92628 1395 aa18.87■□□□□ 0.61
TNFRSF1A-207ENST00000535958 STRN4Q9NRL3 753 aa18.87■□□□□ 0.61
TNFRSF1A-207ENST00000535958 PHRF1Q9P1Y6 1649 aaKnown RBP18.87■□□□□ 0.61
TNFRSF1A-207ENST00000535958 THSD7AQ9UPZ6 1657 aa18.86■□□□□ 0.61
TNFRSF1A-207ENST00000535958 EN1Q05925 392 aaPredicted RBP18.84■□□□□ 0.61
TNFRSF1A-207ENST00000535958 CHRNA2Q15822 529 aa18.84■□□□□ 0.61
TNFRSF1A-207ENST00000535958 FAM182BQ5T319 152 aa18.84■□□□□ 0.61
TNFRSF1A-207ENST00000535958 CDK19Q9BWU1 502 aa18.84■□□□□ 0.61
TNFRSF1A-207ENST00000535958 HRCP23327 699 aa18.83■□□□□ 0.6
TNFRSF1A-207ENST00000535958 EVA1CP58658 441 aa18.83■□□□□ 0.6
TNFRSF1A-207ENST00000535958 ZC3H6P61129 1189 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1A-207ENST00000535958 NUTM2GQ5VZR2 741 aa18.83■□□□□ 0.6
TNFRSF1A-207ENST00000535958 TOPAZ1Q8N9V7 1692 aa18.82■□□□□ 0.6
TNFRSF1A-207ENST00000535958 SPATA31A1Q5TZJ5 1347 aa18.82■□□□□ 0.6
TNFRSF1A-207ENST00000535958 ACEP12821 1306 aa18.81■□□□□ 0.6
TNFRSF1A-207ENST00000535958 KIAA1210Q9ULL0 1709 aa18.81■□□□□ 0.6
TNFRSF1A-207ENST00000535958 USP35Q9P2H5 1018 aa18.81■□□□□ 0.6
TNFRSF1A-207ENST00000535958 CCDC61Q9Y6R9 512 aa18.81■□□□□ 0.6
TNFRSF1A-207ENST00000535958 TNS1Q9HBL0 1735 aaKnown RBP18.8■□□□□ 0.6
TNFRSF1A-207ENST00000535958 FAM196AQ6ZSG2 479 aa18.8■□□□□ 0.6
TNFRSF1A-207ENST00000535958 ABTB2Q8N961 1025 aa18.8■□□□□ 0.6
TNFRSF1A-207ENST00000535958 DISP2A7MBM2 1401 aa18.8■□□□□ 0.6
TNFRSF1A-207ENST00000535958 POLR3AO14802 1390 aaPredicted RBP18.8■□□□□ 0.6
TNFRSF1A-207ENST00000535958 SRPK2P78362 688 aaKnown RBP18.79■□□□□ 0.6
TNFRSF1A-207ENST00000535958 PDE3BQ13370 1112 aa18.79■□□□□ 0.6
TNFRSF1A-207ENST00000535958 NRKQ7Z2Y5 1582 aa18.79■□□□□ 0.6
TNFRSF1A-207ENST00000535958 SSH2Q76I76 1423 aa18.78■□□□□ 0.6
TNFRSF1A-207ENST00000535958 R3HDM1Q15032 1099 aaKnown RBP18.78■□□□□ 0.6
TNFRSF1A-207ENST00000535958 NBPF8Q3BBV2 869 aa18.78■□□□□ 0.6
TNFRSF1A-207ENST00000535958 TRIM37O94972 964 aa18.77■□□□□ 0.6
TNFRSF1A-207ENST00000535958 EZH2Q15910 746 aaKnown RBP18.76■□□□□ 0.59
TNFRSF1A-207ENST00000535958 PPIP5K1Q6PFW1 1433 aa18.75■□□□□ 0.59
TNFRSF1A-207ENST00000535958 PLEKHG3A1L390 1219 aa18.75■□□□□ 0.59
TNFRSF1A-207ENST00000535958 APBA3O96018 575 aa18.75■□□□□ 0.59
TNFRSF1A-207ENST00000535958 NLRP13Q86W25 1043 aa18.75■□□□□ 0.59
TNFRSF1A-207ENST00000535958 PARD3Q8TEW0 1356 aa18.75■□□□□ 0.59
TNFRSF1A-207ENST00000535958 CENPJQ9HC77 1338 aaPredicted RBP18.74■□□□□ 0.59
TNFRSF1A-207ENST00000535958 BARGINQ6ZT62 677 aa18.74■□□□□ 0.59
TNFRSF1A-207ENST00000535958 CPDO75976 1380 aa18.73■□□□□ 0.59
TNFRSF1A-207ENST00000535958 ZBTB7CA1YPR0 619 aa18.73■□□□□ 0.59
TNFRSF1A-207ENST00000535958 TCP11L2Q8N4U5 519 aa18.73■□□□□ 0.59
TNFRSF1A-207ENST00000535958 LARP1Q6PKG0 1096 aaKnown RBP18.72■□□□□ 0.59
TNFRSF1A-207ENST00000535958 USP19O94966 1318 aa18.72■□□□□ 0.59
TNFRSF1A-207ENST00000535958 QRICH2Q9H0J4 1663 aa18.71■□□□□ 0.59
TNFRSF1A-207ENST00000535958 CAMTA1Q9Y6Y1 1673 aa18.71■□□□□ 0.59
TNFRSF1A-207ENST00000535958 THRAP3Q9Y2W1 955 aaKnown RBP18.71■□□□□ 0.59
TNFRSF1A-207ENST00000535958 BRD4O60885 1362 aaPredicted RBP18.7■□□□□ 0.58
TNFRSF1A-207ENST00000535958 LMO7Q8WWI1 1683 aa18.7■□□□□ 0.58
TNFRSF1A-207ENST00000535958 NBPF1Q3BBV0 1214 aa18.7■□□□□ 0.58
TNFRSF1A-207ENST00000535958 NBPF14Q5TI25 921 aa18.7■□□□□ 0.58
TNFRSF1A-207ENST00000535958 CAMKK2Q96RR4 588 aa18.7■□□□□ 0.58
TNFRSF1A-207ENST00000535958 CABP2Q9NPB3 220 aa18.7■□□□□ 0.58
TNFRSF1A-207ENST00000535958 GCP02774 474 aa18.69■□□□□ 0.58
TNFRSF1A-207ENST00000535958 C11orf95C9JLR9 678 aaPredicted RBP18.68■□□□□ 0.58
TNFRSF1A-207ENST00000535958 RREB1Q92766 1687 aa18.67■□□□□ 0.58
TNFRSF1A-207ENST00000535958 COL5A2P05997 1499 aaPredicted RBP18.67■□□□□ 0.58
TNFRSF1A-207ENST00000535958 CRB1P82279 1406 aa18.66■□□□□ 0.58
TNFRSF1A-207ENST00000535958 PARP4Q9UKK3 1724 aaKnown RBP18.66■□□□□ 0.58
TNFRSF1A-207ENST00000535958 NLRP6P59044 892 aa18.66■□□□□ 0.58
TNFRSF1A-207ENST00000535958 USP6P35125 1406 aa18.66■□□□□ 0.58
TNFRSF1A-207ENST00000535958 NUP188Q5SRE5 1749 aa18.65■□□□□ 0.58
TNFRSF1A-207ENST00000535958 OVOS2A0A0G2JMS6 1433 aa18.65■□□□□ 0.58
TNFRSF1A-207ENST00000535958 OVOS2A0A0J9YW53 1432 aa18.65■□□□□ 0.58
TNFRSF1A-207ENST00000535958 OVOS2Q6IE36 1432 aa18.65■□□□□ 0.58
TNFRSF1A-207ENST00000535958 CABP1Q9NZU7 370 aa18.64■□□□□ 0.57
TNFRSF1A-207ENST00000535958 TOM1L2Q6ZVM7 507 aa18.63■□□□□ 0.57
TNFRSF1A-207ENST00000535958 EVC2Q86UK5 1308 aa18.63■□□□□ 0.57
TNFRSF1A-207ENST00000535958 SLIT3O75094 1523 aa18.61■□□□□ 0.57
TNFRSF1A-207ENST00000535958 AATKQ6ZMQ8 1374 aa18.61■□□□□ 0.57
TNFRSF1A-207ENST00000535958 DDB1Q16531 1140 aa18.61■□□□□ 0.57
TNFRSF1A-207ENST00000535958 PPP1R1BQ9UD71 204 aaPredicted RBP18.61■□□□□ 0.57
TNFRSF1A-207ENST00000535958 LRRC37A3O60309 1634 aa18.6■□□□□ 0.57
TNFRSF1A-207ENST00000535958 TRPM1Q7Z4N2 1603 aa18.6■□□□□ 0.57
TNFRSF1A-207ENST00000535958 PIK3C2AO00443 1686 aa18.59■□□□□ 0.57
TNFRSF1A-207ENST00000535958 ROCK2O75116 1388 aaKnown RBP18.58■□□□□ 0.57
TNFRSF1A-207ENST00000535958 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.56
TNFRSF1A-207ENST00000535958 CSB-PGBD3P0DP91 1061 aa18.58■□□□□ 0.56
TNFRSF1A-207ENST00000535958 KCNH5Q8NCM2 988 aa18.57■□□□□ 0.56
TNFRSF1A-207ENST00000535958 L3MBTL2Q969R5 705 aa18.57■□□□□ 0.56
TNFRSF1A-207ENST00000535958 CPSF1Q10570 1443 aaKnown RBP18.57■□□□□ 0.56
TNFRSF1A-207ENST00000535958 WDR17Q8IZU2 1322 aa18.56■□□□□ 0.56
TNFRSF1A-207ENST00000535958 RGPD3A6NKT7 1758 aaPredicted RBP18.56■□□□□ 0.56
TNFRSF1A-207ENST00000535958 RGPD4Q7Z3J3 1758 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms