RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 POLA2Q14181 598 aa12.72□□□□□ -0.37
CHD4-204ENST00000535810 EP400Q96L91 3159 aa12.72□□□□□ -0.37
CHD4-204ENST00000535810 ITSN1Q15811 1721 aa12.71□□□□□ -0.38
CHD4-204ENST00000535810 TRPM3Q9HCF6 1732 aaPredicted RBP12.71□□□□□ -0.38
CHD4-204ENST00000535810 ARHGEF10O15013 1369 aa12.7□□□□□ -0.38
CHD4-204ENST00000535810 CENPJQ9HC77 1338 aaPredicted RBP12.7□□□□□ -0.38
CHD4-204ENST00000535810 FNBP4Q8N3X1 1017 aaPredicted RBP12.7□□□□□ -0.38
CHD4-204ENST00000535810 NUDT16Q96DE0 195 aaKnown RBP12.7□□□□□ -0.38
CHD4-204ENST00000535810 CDK19Q9BWU1 502 aa12.7□□□□□ -0.38
CHD4-204ENST00000535810 MARF1Q9Y4F3 1742 aaKnown RBP12.7□□□□□ -0.38
CHD4-204ENST00000535810 TOPAZ1Q8N9V7 1692 aa12.7□□□□□ -0.38
CHD4-204ENST00000535810 ROCK2O75116 1388 aaKnown RBP12.69□□□□□ -0.38
CHD4-204ENST00000535810 GPRASP1Q5JY77 1395 aa12.69□□□□□ -0.38
CHD4-204ENST00000535810 USP21Q9UK80 565 aa12.69□□□□□ -0.38
CHD4-204ENST00000535810 QRICH2Q9H0J4 1663 aa12.69□□□□□ -0.38
CHD4-204ENST00000535810 ABCA3Q99758 1704 aa12.68□□□□□ -0.38
CHD4-204ENST00000535810 BCL9LQ86UU0 1499 aa12.68□□□□□ -0.38
CHD4-204ENST00000535810 NBPF8Q3BBV2 869 aa12.68□□□□□ -0.38
CHD4-204ENST00000535810 NGDNQ8NEJ9 315 aaKnown RBP12.68□□□□□ -0.38
CHD4-204ENST00000535810 ALS2Q96Q42 1657 aa12.67□□□□□ -0.38
CHD4-204ENST00000535810 ABCB7O75027 752 aa12.67□□□□□ -0.38
CHD4-204ENST00000535810 LMOD2Q6P5Q4 547 aa12.67□□□□□ -0.38
CHD4-204ENST00000535810 CABLES1Q8TDN4 633 aa12.67□□□□□ -0.38
CHD4-204ENST00000535810 TRPC5Q9UL62 973 aaPredicted RBP12.67□□□□□ -0.38
CHD4-204ENST00000535810 ATRNO75882 1429 aa12.67□□□□□ -0.38
CHD4-204ENST00000535810 TONSLQ96HA7 1378 aa12.67□□□□□ -0.38
CHD4-204ENST00000535810 CCDC61Q9Y6R9 512 aa12.66□□□□□ -0.38
CHD4-204ENST00000535810 SLIT2O94813 1529 aa12.66□□□□□ -0.38
CHD4-204ENST00000535810 POLR3AO14802 1390 aaPredicted RBP12.66□□□□□ -0.38
CHD4-204ENST00000535810 PLEKHG5O94827 1062 aa12.65□□□□□ -0.38
CHD4-204ENST00000535810 HAP1P54257 671 aaPredicted RBP12.65□□□□□ -0.38
CHD4-204ENST00000535810 RALGAPBQ86X10 1494 aa12.65□□□□□ -0.38
CHD4-204ENST00000535810 PLEKHG3A1L390 1219 aa12.64□□□□□ -0.39
CHD4-204ENST00000535810 SRPK2P78362 688 aaKnown RBP12.64□□□□□ -0.39
CHD4-204ENST00000535810 CABP2Q9NPB3 220 aa12.64□□□□□ -0.39
CHD4-204ENST00000535810 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.64□□□□□ -0.39
CHD4-204ENST00000535810 ACEP12821 1306 aa12.63□□□□□ -0.39
CHD4-204ENST00000535810 PPIP5K1Q6PFW1 1433 aa12.63□□□□□ -0.39
CHD4-204ENST00000535810 MKRN4PQ13434 485 aaPredicted RBP12.63□□□□□ -0.39
CHD4-204ENST00000535810 CRYBG1Q9Y4K1 1723 aa12.62□□□□□ -0.39
CHD4-204ENST00000535810 PAK3O75914 559 aaPredicted RBP12.62□□□□□ -0.39
CHD4-204ENST00000535810 PLCH1Q4KWH8 1693 aa12.61□□□□□ -0.39
CHD4-204ENST00000535810 UNC5CLQ8IV45 518 aa12.61□□□□□ -0.39
CHD4-204ENST00000535810 EVC2Q86UK5 1308 aa12.61□□□□□ -0.39
CHD4-204ENST00000535810 NWD2Q9ULI1 1742 aa12.6□□□□□ -0.39
CHD4-204ENST00000535810 SBNO2Q9Y2G9 1366 aa12.6□□□□□ -0.39
CHD4-204ENST00000535810 CARD11Q9BXL7 1154 aa12.6□□□□□ -0.39
CHD4-204ENST00000535810 FAM83GA6ND36 823 aa12.59□□□□□ -0.39
CHD4-204ENST00000535810 GJD4Q96KN9 370 aaPredicted RBP12.59□□□□□ -0.39
CHD4-204ENST00000535810 GLI3P10071 1580 aa12.59□□□□□ -0.39
CHD4-204ENST00000535810 PHRF1Q9P1Y6 1649 aaKnown RBP12.59□□□□□ -0.39
CHD4-204ENST00000535810 CABP1Q9NZU7 370 aa12.58□□□□□ -0.4
CHD4-204ENST00000535810 COL14A1Q05707 1796 aaKnown RBP12.58□□□□□ -0.4
CHD4-204ENST00000535810 NRAPQ86VF7 1730 aa12.57□□□□□ -0.4
CHD4-204ENST00000535810 USP6P35125 1406 aa12.57□□□□□ -0.4
CHD4-204ENST00000535810 BLMP54132 1417 aaPredicted RBP12.57□□□□□ -0.4
CHD4-204ENST00000535810 VPS72Q15906 364 aa12.57□□□□□ -0.4
CHD4-204ENST00000535810 NUTM2GQ5VZR2 741 aa12.57□□□□□ -0.4
CHD4-204ENST00000535810 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
CHD4-204ENST00000535810 NRKQ7Z2Y5 1582 aa12.56□□□□□ -0.4
CHD4-204ENST00000535810 BTG4Q9NY30 223 aa12.56□□□□□ -0.4
CHD4-204ENST00000535810 USP19O94966 1318 aa12.56□□□□□ -0.4
CHD4-204ENST00000535810 KIAA0232Q92628 1395 aa12.56□□□□□ -0.4
CHD4-204ENST00000535810 SSH2Q76I76 1423 aa12.55□□□□□ -0.4
CHD4-204ENST00000535810 ABTB2Q8N961 1025 aa12.55□□□□□ -0.4
CHD4-204ENST00000535810 PRDM11Q9NQV5 511 aa12.55□□□□□ -0.4
CHD4-204ENST00000535810 PCGF6Q9BYE7 350 aa12.54□□□□□ -0.4
CHD4-204ENST00000535810 LRP5O75197 1615 aa12.53□□□□□ -0.4
CHD4-204ENST00000535810 SF3B2Q13435 895 aaKnown RBP12.53□□□□□ -0.4
CHD4-204ENST00000535810 CLSPNQ9HAW4 1339 aa12.53□□□□□ -0.4
CHD4-204ENST00000535810 CPSF1Q10570 1443 aaKnown RBP12.53□□□□□ -0.4
CHD4-204ENST00000535810 PIK3C2AO00443 1686 aa12.52□□□□□ -0.4
CHD4-204ENST00000535810 AKAP12Q02952 1782 aa12.52□□□□□ -0.41
CHD4-204ENST00000535810 DSG3P32926 999 aa12.52□□□□□ -0.41
CHD4-204ENST00000535810 ZC3H6P61129 1189 aaKnown RBP12.52□□□□□ -0.41
CHD4-204ENST00000535810 CHRNA2Q15822 529 aa12.52□□□□□ -0.41
CHD4-204ENST00000535810 DEFB132Q7Z7B7 95 aa12.52□□□□□ -0.41
CHD4-204ENST00000535810 CCDC9Q9Y3X0 531 aaKnown RBP12.52□□□□□ -0.41
CHD4-204ENST00000535810 CPDO75976 1380 aa12.52□□□□□ -0.41
CHD4-204ENST00000535810 ONECUT3O60422 494 aaPredicted RBP12.51□□□□□ -0.41
CHD4-204ENST00000535810 NLRP13Q86W25 1043 aa12.51□□□□□ -0.41
CHD4-204ENST00000535810 SEPT12Q8IYM1 358 aa12.51□□□□□ -0.41
CHD4-204ENST00000535810 TESK2Q96S53 571 aa12.51□□□□□ -0.41
CHD4-204ENST00000535810 SLIT3O75094 1523 aa12.51□□□□□ -0.41
CHD4-204ENST00000535810 ST20-MTHFSA0A0A6YYL1 179 aa12.5□□□□□ -0.41
CHD4-204ENST00000535810 CACNB1Q02641 598 aaPredicted RBP12.5□□□□□ -0.41
CHD4-204ENST00000535810 ZNF692Q9BU19 519 aaPredicted RBP12.5□□□□□ -0.41
CHD4-204ENST00000535810 SPATA31A5Q5VU36 1347 aa12.5□□□□□ -0.41
CHD4-204ENST00000535810 SPATA31A7Q8IWB4 1347 aa12.5□□□□□ -0.41
CHD4-204ENST00000535810 CD163L1Q9NR16 1453 aa12.5□□□□□ -0.41
CHD4-204ENST00000535810 LMO7Q8WWI1 1683 aa12.5□□□□□ -0.41
CHD4-204ENST00000535810 BRWD3Q6RI45 1802 aa12.49□□□□□ -0.41
CHD4-204ENST00000535810 MON2Q7Z3U7 1717 aa12.49□□□□□ -0.41
CHD4-204ENST00000535810 KTN1Q86UP2 1357 aaKnown RBP12.49□□□□□ -0.41
CHD4-204ENST00000535810 TTC21BQ7Z4L5 1316 aa12.49□□□□□ -0.41
CHD4-204ENST00000535810 GCP02774 474 aa12.49□□□□□ -0.41
CHD4-204ENST00000535810 NLRP6P59044 892 aa12.49□□□□□ -0.41
CHD4-204ENST00000535810 TIMELESSQ9UNS1 1208 aa12.49□□□□□ -0.41
CHD4-204ENST00000535810 CAMTA1Q9Y6Y1 1673 aa12.48□□□□□ -0.41
CHD4-204ENST00000535810 USP47Q96K76 1375 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms