RNA–Protein interactions for RNA: ENST00000535765.5

VPS37B-203, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-203ENST00000535765 CABP2Q9NPB3 220 aa33.23■■■□□ 2.91
VPS37B-203ENST00000535765 TRPC5Q9UL62 973 aaPredicted RBP33.22■■■□□ 2.91
VPS37B-203ENST00000535765 ACEP12821 1306 aa33.2■■■□□ 2.91
VPS37B-203ENST00000535765 PPIP5K1Q6PFW1 1433 aa33.19■■■□□ 2.9
VPS37B-203ENST00000535765 CDK12Q9NYV4 1490 aaPredicted RBP33.17■■■□□ 2.9
VPS37B-203ENST00000535765 SLC24A1O60721 1099 aa33.15■■■□□ 2.9
VPS37B-203ENST00000535765 BCL9LQ86UU0 1499 aa33.15■■■□□ 2.9
VPS37B-203ENST00000535765 ABCA3Q99758 1704 aa33.15■■■□□ 2.9
VPS37B-203ENST00000535765 BRD4O60885 1362 aaPredicted RBP33.14■■■□□ 2.9
VPS37B-203ENST00000535765 ATRNO75882 1429 aa33.12■■■□□ 2.89
VPS37B-203ENST00000535765 ATAD2Q6PL18 1390 aa33.12■■■□□ 2.89
VPS37B-203ENST00000535765 CABP1Q9NZU7 370 aa33.12■■■□□ 2.89
VPS37B-203ENST00000535765 PUS7Q96PZ0 661 aaKnown RBP33.11■■■□□ 2.89
VPS37B-203ENST00000535765 UNC5CLQ8IV45 518 aa33.1■■■□□ 2.89
VPS37B-203ENST00000535765 SLIT2O94813 1529 aa33.09■■■□□ 2.89
VPS37B-203ENST00000535765 CRYBG1Q9Y4K1 1723 aa33.08■■■□□ 2.89
VPS37B-203ENST00000535765 ST20-MTHFSA0A0A6YYL1 179 aa33.08■■■□□ 2.89
VPS37B-203ENST00000535765 RGS12O14924 1447 aa33.08■■■□□ 2.89
VPS37B-203ENST00000535765 TESK2Q96S53 571 aa33.07■■■□□ 2.88
VPS37B-203ENST00000535765 AKAP12Q02952 1782 aa33.06■■■□□ 2.88
VPS37B-203ENST00000535765 FAM83GA6ND36 823 aa33.05■■■□□ 2.88
VPS37B-203ENST00000535765 ZNF692Q9BU19 519 aaPredicted RBP33.05■■■□□ 2.88
VPS37B-203ENST00000535765 NUTM2GQ5VZR2 741 aa33.04■■■□□ 2.88
VPS37B-203ENST00000535765 GJD4Q96KN9 370 aaPredicted RBP33.04■■■□□ 2.88
VPS37B-203ENST00000535765 USP47Q96K76 1375 aa33.04■■■□□ 2.88
VPS37B-203ENST00000535765 USP6P35125 1406 aa33.02■■■□□ 2.88
VPS37B-203ENST00000535765 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.02■■■□□ 2.88
VPS37B-203ENST00000535765 ABTB2Q8N961 1025 aa33.02■■■□□ 2.88
VPS37B-203ENST00000535765 NWD2Q9ULI1 1742 aa32.99■■■□□ 2.87
VPS37B-203ENST00000535765 CPSF1Q10570 1443 aaKnown RBP32.99■■■□□ 2.87
VPS37B-203ENST00000535765 SSH2Q76I76 1423 aa32.99■■■□□ 2.87
VPS37B-203ENST00000535765 PRDM11Q9NQV5 511 aa32.97■■■□□ 2.87
VPS37B-203ENST00000535765 CCDC9Q9Y3X0 531 aaKnown RBP32.97■■■□□ 2.87
VPS37B-203ENST00000535765 PHRF1Q9P1Y6 1649 aaKnown RBP32.97■■■□□ 2.87
VPS37B-203ENST00000535765 VPS72Q15906 364 aa32.96■■■□□ 2.87
VPS37B-203ENST00000535765 BTG4Q9NY30 223 aa32.96■■■□□ 2.87
VPS37B-203ENST00000535765 PLCH1Q4KWH8 1693 aa32.95■■■□□ 2.87
VPS37B-203ENST00000535765 UPF1Q92900 1129 aaKnown RBP eCLIP32.95■■■□□ 2.87
VPS37B-203ENST00000535765 MON2Q7Z3U7 1717 aa32.94■■■□□ 2.86
VPS37B-203ENST00000535765 NLRP13Q86W25 1043 aa32.93■■■□□ 2.86
VPS37B-203ENST00000535765 COL14A1Q05707 1796 aaKnown RBP32.93■■■□□ 2.86
VPS37B-203ENST00000535765 ZC3H6P61129 1189 aaKnown RBP32.92■■■□□ 2.86
VPS37B-203ENST00000535765 KIAA0232Q92628 1395 aa32.92■■■□□ 2.86
VPS37B-203ENST00000535765 USP19O94966 1318 aa32.91■■■□□ 2.86
VPS37B-203ENST00000535765 NINLQ9Y2I6 1382 aa32.91■■■□□ 2.86
VPS37B-203ENST00000535765 TMF1P82094 1093 aa32.9■■■□□ 2.86
VPS37B-203ENST00000535765 NRKQ7Z2Y5 1582 aa32.9■■■□□ 2.86
VPS37B-203ENST00000535765 CD163L1Q9NR16 1453 aa32.88■■■□□ 2.85
VPS37B-203ENST00000535765 KTN1Q86UP2 1357 aaKnown RBP32.88■■■□□ 2.85
VPS37B-203ENST00000535765 TTC21AQ8NDW8 1320 aa32.88■■■□□ 2.85
VPS37B-203ENST00000535765 GLI3P10071 1580 aa32.87■■■□□ 2.85
VPS37B-203ENST00000535765 TTC21BQ7Z4L5 1316 aa32.87■■■□□ 2.85
VPS37B-203ENST00000535765 NLRP6P59044 892 aa32.87■■■□□ 2.85
VPS37B-203ENST00000535765 CHRNA2Q15822 529 aa32.87■■■□□ 2.85
VPS37B-203ENST00000535765 PIK3C2AO00443 1686 aa32.87■■■□□ 2.85
VPS37B-203ENST00000535765 TMC1Q8TDI8 760 aa32.86■■■□□ 2.85
VPS37B-203ENST00000535765 SLC12A5Q9H2X9 1139 aa32.86■■■□□ 2.85
VPS37B-203ENST00000535765 CDCA8Q53HL2 280 aa32.85■■■□□ 2.85
VPS37B-203ENST00000535765 TERF2IPQ9NYB0 399 aa32.85■■■□□ 2.85
VPS37B-203ENST00000535765 GCP02774 474 aa32.84■■■□□ 2.85
VPS37B-203ENST00000535765 HDGFL2Q7Z4V5 671 aaPredicted RBP32.84■■■□□ 2.85
VPS37B-203ENST00000535765 NRAPQ86VF7 1730 aa32.83■■■□□ 2.85
VPS37B-203ENST00000535765 CPDO75976 1380 aa32.82■■■□□ 2.84
VPS37B-203ENST00000535765 SEPT12Q8IYM1 358 aa32.81■■■□□ 2.84
VPS37B-203ENST00000535765 SLIT3O75094 1523 aa32.81■■■□□ 2.84
VPS37B-203ENST00000535765 USP54Q70EL1 1684 aa32.78■■■□□ 2.84
VPS37B-203ENST00000535765 EDC4Q6P2E9 1401 aaKnown RBP32.78■■■□□ 2.84
VPS37B-203ENST00000535765 A0A0G2JS52 829 aa32.78■■■□□ 2.84
VPS37B-203ENST00000535765 MYT1Q01538 1121 aa32.78■■■□□ 2.84
VPS37B-203ENST00000535765 STRN4Q9NRL3 753 aa32.78■■■□□ 2.84
VPS37B-203ENST00000535765 ONECUT3O60422 494 aaPredicted RBP32.77■■■□□ 2.84
VPS37B-203ENST00000535765 EIF4G2P78344 907 aaKnown RBP eCLIP32.77■■■□□ 2.84
VPS37B-203ENST00000535765 A0A1W2PP64 1363 aa32.77■■■□□ 2.84
VPS37B-203ENST00000535765 FAM98CQ17RN3 349 aaKnown RBP32.76■■■□□ 2.83
VPS37B-203ENST00000535765 SPATA31A5Q5VU36 1347 aa32.76■■■□□ 2.83
VPS37B-203ENST00000535765 SPATA31A7Q8IWB4 1347 aa32.76■■■□□ 2.83
VPS37B-203ENST00000535765 EVA1CP58658 441 aa32.75■■■□□ 2.83
VPS37B-203ENST00000535765 USP31Q70CQ4 1352 aa32.74■■■□□ 2.83
VPS37B-203ENST00000535765 ZBTB7CA1YPR0 619 aa32.74■■■□□ 2.83
VPS37B-203ENST00000535765 LMO7Q8WWI1 1683 aa32.72■■■□□ 2.83
VPS37B-203ENST00000535765 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.72■■■□□ 2.83
VPS37B-203ENST00000535765 KCNH5Q8NCM2 988 aa32.72■■■□□ 2.83
VPS37B-203ENST00000535765 ANKRD36BQ8N2N9 1353 aa32.71■■■□□ 2.83
VPS37B-203ENST00000535765 HSPA5P11021 654 aaKnown RBP32.68■■■□□ 2.82
VPS37B-203ENST00000535765 KRT27Q7Z3Y8 459 aa32.68■■■□□ 2.82
VPS37B-203ENST00000535765 SPATA31A1Q5TZJ5 1347 aa32.68■■■□□ 2.82
VPS37B-203ENST00000535765 CAMTA1Q9Y6Y1 1673 aa32.67■■■□□ 2.82
VPS37B-203ENST00000535765 SOX12O15370 315 aa32.67■■■□□ 2.82
VPS37B-203ENST00000535765 MYOM1P52179 1685 aa32.66■■■□□ 2.82
VPS37B-203ENST00000535765 USP35Q9P2H5 1018 aa32.65■■■□□ 2.82
VPS37B-203ENST00000535765 AATKQ6ZMQ8 1374 aa32.65■■■□□ 2.82
VPS37B-203ENST00000535765 COL18A1P39060 1754 aa32.65■■■□□ 2.82
VPS37B-203ENST00000535765 LARP1Q6PKG0 1096 aaKnown RBP32.64■■■□□ 2.82
VPS37B-203ENST00000535765 NME9Q86XW9 330 aa32.64■■■□□ 2.82
VPS37B-203ENST00000535765 NFAT5O94916 1531 aa32.63■■■□□ 2.81
VPS37B-203ENST00000535765 ARHGEF25Q86VW2 580 aa32.62■■■□□ 2.81
VPS37B-203ENST00000535765 CCDC125Q86Z20 511 aa32.62■■■□□ 2.81
VPS37B-203ENST00000535765 ZRANB1Q9UGI0 708 aa32.62■■■□□ 2.81
VPS37B-203ENST00000535765 BRWD3Q6RI45 1802 aa32.6■■■□□ 2.81
VPS37B-203ENST00000535765 COL5A2P05997 1499 aaPredicted RBP32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms