RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 HSPA1AP0DMV8 641 aaKnown RBP17.7■□□□□ 0.42
LINC01089-204ENST00000535643 HSPA1BP0DMV9 641 aaKnown RBP17.7■□□□□ 0.42
LINC01089-204ENST00000535643 YBX3P16989 372 aaKnown RBP eCLIP17.7■□□□□ 0.42
LINC01089-204ENST00000535643 DUOX2Q9NRD8 1548 aa17.7■□□□□ 0.42
LINC01089-204ENST00000535643 BCL11BQ9C0K0 894 aaPredicted RBP17.69■□□□□ 0.42
LINC01089-204ENST00000535643 LRPPRCP42704 1394 aaKnown RBP17.68■□□□□ 0.42
LINC01089-204ENST00000535643 KLHL34Q8N239 644 aa17.67■□□□□ 0.42
LINC01089-204ENST00000535643 NRXN3Q9Y4C0 1643 aa17.67■□□□□ 0.42
LINC01089-204ENST00000535643 UBTFP17480 764 aaKnown RBP17.66■□□□□ 0.42
LINC01089-204ENST00000535643 NLGN2Q8NFZ4 835 aa17.64■□□□□ 0.41
LINC01089-204ENST00000535643 PLSCR1O15162 318 aa17.63■□□□□ 0.41
LINC01089-204ENST00000535643 TOMM70O94826 608 aa17.63■□□□□ 0.41
LINC01089-204ENST00000535643 ACIN1Q9UKV3 1341 aaKnown RBP17.63■□□□□ 0.41
LINC01089-204ENST00000535643 ERBINQ96RT1 1412 aa17.62■□□□□ 0.41
LINC01089-204ENST00000535643 CENPBP07199 599 aaPredicted RBP17.61■□□□□ 0.41
LINC01089-204ENST00000535643 MLLT1Q03111 559 aaPredicted RBP17.61■□□□□ 0.41
LINC01089-204ENST00000535643 PDE3BQ13370 1112 aa17.61■□□□□ 0.41
LINC01089-204ENST00000535643 STK32BQ9NY57 414 aa17.61■□□□□ 0.41
LINC01089-204ENST00000535643 RGPD3A6NKT7 1758 aaPredicted RBP17.61■□□□□ 0.41
LINC01089-204ENST00000535643 RGPD4Q7Z3J3 1758 aa17.61■□□□□ 0.41
LINC01089-204ENST00000535643 SLC15A2Q16348 729 aa17.6■□□□□ 0.41
LINC01089-204ENST00000535643 PROM2Q8N271 834 aa17.6■□□□□ 0.41
LINC01089-204ENST00000535643 CEP162Q5TB80 1403 aa17.6■□□□□ 0.41
LINC01089-204ENST00000535643 ABCA3Q99758 1704 aa17.58■□□□□ 0.41
LINC01089-204ENST00000535643 SPATA31A1Q5TZJ5 1347 aa17.58■□□□□ 0.4
LINC01089-204ENST00000535643 CCER1Q8TC90 406 aaPredicted RBP17.58■□□□□ 0.4
LINC01089-204ENST00000535643 RRBP1Q9P2E9 1410 aaKnown RBP17.57■□□□□ 0.4
LINC01089-204ENST00000535643 ROBO2Q9HCK4 1378 aa17.57■□□□□ 0.4
LINC01089-204ENST00000535643 TNS3Q68CZ2 1445 aa17.56■□□□□ 0.4
LINC01089-204ENST00000535643 KIF15Q9NS87 1388 aa17.56■□□□□ 0.4
LINC01089-204ENST00000535643 CCDC144AA2RUR9 1427 aa17.55■□□□□ 0.4
LINC01089-204ENST00000535643 KRT28Q7Z3Y7 464 aa17.55■□□□□ 0.4
LINC01089-204ENST00000535643 KIAA1210Q9ULL0 1709 aa17.52■□□□□ 0.4
LINC01089-204ENST00000535643 USP19O94966 1318 aa17.51■□□□□ 0.39
LINC01089-204ENST00000535643 COL14A1Q05707 1796 aaKnown RBP17.51■□□□□ 0.39
LINC01089-204ENST00000535643 NUTM2FA1L443 756 aa17.51■□□□□ 0.39
LINC01089-204ENST00000535643 RRP7BPQ9NSQ0 103 aa17.5■□□□□ 0.39
LINC01089-204ENST00000535643 LMOD2Q6P5Q4 547 aa17.49■□□□□ 0.39
LINC01089-204ENST00000535643 TECPR2O15040 1411 aa17.48■□□□□ 0.39
LINC01089-204ENST00000535643 PTF1AQ7RTS3 328 aa17.48■□□□□ 0.39
LINC01089-204ENST00000535643 CDC42BPGQ6DT37 1551 aa17.48■□□□□ 0.39
LINC01089-204ENST00000535643 RGS19P49795 217 aa17.47■□□□□ 0.39
LINC01089-204ENST00000535643 DIEXFQ68CQ4 756 aaKnown RBP17.47■□□□□ 0.39
LINC01089-204ENST00000535643 USP35Q9P2H5 1018 aa17.46■□□□□ 0.39
LINC01089-204ENST00000535643 MAPK8IP2Q13387 824 aaPredicted RBP17.45■□□□□ 0.38
LINC01089-204ENST00000535643 TXNRD1Q16881 649 aa17.45■□□□□ 0.38
LINC01089-204ENST00000535643 RBM46Q8TBY0 533 aaKnown RBP17.45■□□□□ 0.38
LINC01089-204ENST00000535643 ARHGEF10O15013 1369 aa17.44■□□□□ 0.38
LINC01089-204ENST00000535643 BARGINQ6ZT62 677 aa17.44■□□□□ 0.38
LINC01089-204ENST00000535643 POLD1P28340 1107 aa17.43■□□□□ 0.38
LINC01089-204ENST00000535643 ABHD8Q96I13 439 aa17.43■□□□□ 0.38
LINC01089-204ENST00000535643 PDE4DIPQ5VU43 2346 aa17.42■□□□□ 0.38
LINC01089-204ENST00000535643 HFM1A2PYH4 1435 aa17.42■□□□□ 0.38
LINC01089-204ENST00000535643 ARHGEF28Q8N1W1 1705 aaKnown RBP17.41■□□□□ 0.38
LINC01089-204ENST00000535643 C11orf95C9JLR9 678 aaPredicted RBP17.41■□□□□ 0.38
LINC01089-204ENST00000535643 PSME1Q06323 249 aa17.41■□□□□ 0.38
LINC01089-204ENST00000535643 SBNO1A3KN83 1393 aa17.4■□□□□ 0.38
LINC01089-204ENST00000535643 DHX57Q6P158 1386 aaKnown RBP17.4■□□□□ 0.38
LINC01089-204ENST00000535643 NEUROD1Q13562 356 aa17.4■□□□□ 0.38
LINC01089-204ENST00000535643 STRN4Q9NRL3 753 aa17.4■□□□□ 0.38
LINC01089-204ENST00000535643 FSTL1Q12841 308 aa17.39■□□□□ 0.37
LINC01089-204ENST00000535643 PRDM10Q9NQV6 1147 aa17.39■□□□□ 0.37
LINC01089-204ENST00000535643 KIF1AQ12756 1690 aa17.39■□□□□ 0.37
LINC01089-204ENST00000535643 OVOS2A0A0G2JMS6 1433 aa17.38■□□□□ 0.37
LINC01089-204ENST00000535643 OVOS2A0A0J9YW53 1432 aa17.38■□□□□ 0.37
LINC01089-204ENST00000535643 OVOS2Q6IE36 1432 aa17.38■□□□□ 0.37
LINC01089-204ENST00000535643 TULP4Q9NRJ4 1543 aa17.38■□□□□ 0.37
LINC01089-204ENST00000535643 NMRK2Q9NPI5 230 aa17.38■□□□□ 0.37
LINC01089-204ENST00000535643 PRAG1Q86YV5 1406 aa17.38■□□□□ 0.37
LINC01089-204ENST00000535643 PEAK1Q9H792 1746 aa17.36■□□□□ 0.37
LINC01089-204ENST00000535643 IQGAP3Q86VI3 1631 aa17.36■□□□□ 0.37
LINC01089-204ENST00000535643 ZNF316A6NFI3 1004 aaPredicted RBP17.35■□□□□ 0.37
LINC01089-204ENST00000535643 PRDM11Q9NQV5 511 aa17.35■□□□□ 0.37
LINC01089-204ENST00000535643 NAIPQ13075 1403 aa17.35■□□□□ 0.37
LINC01089-204ENST00000535643 SBF2Q86WG5 1849 aa17.35■□□□□ 0.37
LINC01089-204ENST00000535643 TNRC18O15417 2968 aaPredicted RBP17.33■□□□□ 0.37
LINC01089-204ENST00000535643 FOXN1O15353 648 aa17.33■□□□□ 0.36
LINC01089-204ENST00000535643 PMFBP1Q8TBY8 1022 aa17.33■□□□□ 0.36
LINC01089-204ENST00000535643 SLC16A10Q8TF71 515 aa17.32■□□□□ 0.36
LINC01089-204ENST00000535643 COL24A1Q17RW2 1714 aa17.31■□□□□ 0.36
LINC01089-204ENST00000535643 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
LINC01089-204ENST00000535643 TOPAZ1Q8N9V7 1692 aa17.3■□□□□ 0.36
LINC01089-204ENST00000535643 CCDC85CA6NKD9 419 aa17.3■□□□□ 0.36
LINC01089-204ENST00000535643 ZNF827Q17R98 1081 aa17.3■□□□□ 0.36
LINC01089-204ENST00000535643 C16orf71Q8IYS4 520 aaPredicted RBP17.3■□□□□ 0.36
LINC01089-204ENST00000535643 CHRNA2Q15822 529 aa17.28■□□□□ 0.36
LINC01089-204ENST00000535643 PHF8Q9UPP1 1060 aa17.28■□□□□ 0.36
LINC01089-204ENST00000535643 ZNF326Q5BKZ1 582 aaKnown RBP17.27■□□□□ 0.36
LINC01089-204ENST00000535643 GTF3C3Q9Y5Q9 886 aa17.27■□□□□ 0.36
LINC01089-204ENST00000535643 PAPPAQ13219 1627 aa17.27■□□□□ 0.36
LINC01089-204ENST00000535643 SSH2Q76I76 1423 aa17.27■□□□□ 0.35
LINC01089-204ENST00000535643 VPS8Q8N3P4 1428 aa17.27■□□□□ 0.35
LINC01089-204ENST00000535643 CLSPNQ9HAW4 1339 aa17.26■□□□□ 0.35
LINC01089-204ENST00000535643 ATP7BP35670 1465 aa17.26■□□□□ 0.35
LINC01089-204ENST00000535643 MYOM3Q5VTT5 1437 aa17.26■□□□□ 0.35
LINC01089-204ENST00000535643 PARP4Q9UKK3 1724 aaKnown RBP17.25■□□□□ 0.35
LINC01089-204ENST00000535643 LARP1Q6PKG0 1096 aaKnown RBP17.24■□□□□ 0.35
LINC01089-204ENST00000535643 KIAA0232Q92628 1395 aa17.24■□□□□ 0.35
LINC01089-204ENST00000535643 PHRF1Q9P1Y6 1649 aaKnown RBP17.23■□□□□ 0.35
LINC01089-204ENST00000535643 NRXN1Q9ULB1 1477 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms