RNA–Protein interactions for RNA: ENST00000534825.5

CAPRIN1-217, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-217ENST00000534825 ITSN1Q15811 1721 aa25.42■■□□□ 1.66
CAPRIN1-217ENST00000534825 TOPAZ1Q8N9V7 1692 aa25.42■■□□□ 1.66
CAPRIN1-217ENST00000534825 ALS2Q96Q42 1657 aa25.41■■□□□ 1.66
CAPRIN1-217ENST00000534825 SLIT2O94813 1529 aa25.41■■□□□ 1.66
CAPRIN1-217ENST00000534825 ATRNO75882 1429 aa25.4■■□□□ 1.66
CAPRIN1-217ENST00000534825 UNC5CLQ8IV45 518 aa25.4■■□□□ 1.66
CAPRIN1-217ENST00000534825 CDK12Q9NYV4 1490 aaPredicted RBP25.4■■□□□ 1.66
CAPRIN1-217ENST00000534825 TIMELESSQ9UNS1 1208 aa25.39■■□□□ 1.66
CAPRIN1-217ENST00000534825 MARF1Q9Y4F3 1742 aaKnown RBP25.39■■□□□ 1.65
CAPRIN1-217ENST00000534825 SBNO2Q9Y2G9 1366 aa25.39■■□□□ 1.65
CAPRIN1-217ENST00000534825 NUTM2GQ5VZR2 741 aa25.36■■□□□ 1.65
CAPRIN1-217ENST00000534825 GJD4Q96KN9 370 aaPredicted RBP25.36■■□□□ 1.65
CAPRIN1-217ENST00000534825 ABTB2Q8N961 1025 aa25.35■■□□□ 1.65
CAPRIN1-217ENST00000534825 RGS12O14924 1447 aa25.33■■□□□ 1.65
CAPRIN1-217ENST00000534825 ST20-MTHFSA0A0A6YYL1 179 aa25.32■■□□□ 1.64
CAPRIN1-217ENST00000534825 TESK2Q96S53 571 aa25.32■■□□□ 1.64
CAPRIN1-217ENST00000534825 ABCA3Q99758 1704 aa25.32■■□□□ 1.64
CAPRIN1-217ENST00000534825 BRD4O60885 1362 aaPredicted RBP25.31■■□□□ 1.64
CAPRIN1-217ENST00000534825 ZNF692Q9BU19 519 aaPredicted RBP25.31■■□□□ 1.64
CAPRIN1-217ENST00000534825 ATAD2Q6PL18 1390 aa25.31■■□□□ 1.64
CAPRIN1-217ENST00000534825 USP6P35125 1406 aa25.3■■□□□ 1.64
CAPRIN1-217ENST00000534825 SSH2Q76I76 1423 aa25.3■■□□□ 1.64
CAPRIN1-217ENST00000534825 VPS72Q15906 364 aa25.29■■□□□ 1.64
CAPRIN1-217ENST00000534825 NLRP13Q86W25 1043 aa25.28■■□□□ 1.64
CAPRIN1-217ENST00000534825 PUS7Q96PZ0 661 aaKnown RBP25.28■■□□□ 1.64
CAPRIN1-217ENST00000534825 BTG4Q9NY30 223 aa25.28■■□□□ 1.64
CAPRIN1-217ENST00000534825 CCER1Q8TC90 406 aaPredicted RBP25.27■■□□□ 1.64
CAPRIN1-217ENST00000534825 UPF1Q92900 1129 aaKnown RBP eCLIP25.27■■□□□ 1.64
CAPRIN1-217ENST00000534825 USP19O94966 1318 aa25.27■■□□□ 1.64
CAPRIN1-217ENST00000534825 CRYBG1Q9Y4K1 1723 aa25.26■■□□□ 1.63
CAPRIN1-217ENST00000534825 ZC3H6P61129 1189 aaKnown RBP25.26■■□□□ 1.63
CAPRIN1-217ENST00000534825 PRDM11Q9NQV5 511 aa25.26■■□□□ 1.63
CAPRIN1-217ENST00000534825 CPSF1Q10570 1443 aaKnown RBP25.26■■□□□ 1.63
CAPRIN1-217ENST00000534825 KIAA0232Q92628 1395 aa25.25■■□□□ 1.63
CAPRIN1-217ENST00000534825 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.25■■□□□ 1.63
CAPRIN1-217ENST00000534825 TTC21BQ7Z4L5 1316 aa25.24■■□□□ 1.63
CAPRIN1-217ENST00000534825 GCP02774 474 aa25.24■■□□□ 1.63
CAPRIN1-217ENST00000534825 SLC12A5Q9H2X9 1139 aa25.24■■□□□ 1.63
CAPRIN1-217ENST00000534825 ONECUT3O60422 494 aaPredicted RBP25.23■■□□□ 1.63
CAPRIN1-217ENST00000534825 NLRP6P59044 892 aa25.23■■□□□ 1.63
CAPRIN1-217ENST00000534825 CHRNA2Q15822 529 aa25.23■■□□□ 1.63
CAPRIN1-217ENST00000534825 SLC24A1O60721 1099 aa25.22■■□□□ 1.63
CAPRIN1-217ENST00000534825 NWD2Q9ULI1 1742 aa25.21■■□□□ 1.63
CAPRIN1-217ENST00000534825 GLI3P10071 1580 aa25.21■■□□□ 1.63
CAPRIN1-217ENST00000534825 TMC1Q8TDI8 760 aa25.2■■□□□ 1.62
CAPRIN1-217ENST00000534825 PLCH1Q4KWH8 1693 aa25.2■■□□□ 1.62
CAPRIN1-217ENST00000534825 USP47Q96K76 1375 aa25.19■■□□□ 1.62
CAPRIN1-217ENST00000534825 COL14A1Q05707 1796 aaKnown RBP25.19■■□□□ 1.62
CAPRIN1-217ENST00000534825 CCDC9Q9Y3X0 531 aaKnown RBP25.19■■□□□ 1.62
CAPRIN1-217ENST00000534825 CPDO75976 1380 aa25.18■■□□□ 1.62
CAPRIN1-217ENST00000534825 KTN1Q86UP2 1357 aaKnown RBP25.18■■□□□ 1.62
CAPRIN1-217ENST00000534825 CD163L1Q9NR16 1453 aa25.18■■□□□ 1.62
CAPRIN1-217ENST00000534825 TTC21AQ8NDW8 1320 aa25.17■■□□□ 1.62
CAPRIN1-217ENST00000534825 PHRF1Q9P1Y6 1649 aaKnown RBP25.17■■□□□ 1.62
CAPRIN1-217ENST00000534825 SEPT12Q8IYM1 358 aa25.16■■□□□ 1.62
CAPRIN1-217ENST00000534825 SPATA31A5Q5VU36 1347 aa25.15■■□□□ 1.62
CAPRIN1-217ENST00000534825 SPATA31A7Q8IWB4 1347 aa25.15■■□□□ 1.62
CAPRIN1-217ENST00000534825 NRAPQ86VF7 1730 aa25.14■■□□□ 1.61
CAPRIN1-217ENST00000534825 AKAP12Q02952 1782 aa25.13■■□□□ 1.61
CAPRIN1-217ENST00000534825 HDGFL2Q7Z4V5 671 aaPredicted RBP25.13■■□□□ 1.61
CAPRIN1-217ENST00000534825 NRKQ7Z2Y5 1582 aa25.13■■□□□ 1.61
CAPRIN1-217ENST00000534825 TMF1P82094 1093 aa25.12■■□□□ 1.61
CAPRIN1-217ENST00000534825 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.12■■□□□ 1.61
CAPRIN1-217ENST00000534825 TERF2IPQ9NYB0 399 aa25.12■■□□□ 1.61
CAPRIN1-217ENST00000534825 ZRANB1Q9UGI0 708 aa25.12■■□□□ 1.61
CAPRIN1-217ENST00000534825 FAM98CQ17RN3 349 aaKnown RBP25.11■■□□□ 1.61
CAPRIN1-217ENST00000534825 STRN4Q9NRL3 753 aa25.11■■□□□ 1.61
CAPRIN1-217ENST00000534825 SLIT3O75094 1523 aa25.11■■□□□ 1.61
CAPRIN1-217ENST00000534825 PIK3C2AO00443 1686 aa25.1■■□□□ 1.61
CAPRIN1-217ENST00000534825 CAMTA1Q9Y6Y1 1673 aa25.1■■□□□ 1.61
CAPRIN1-217ENST00000534825 EVA1CP58658 441 aa25.09■■□□□ 1.61
CAPRIN1-217ENST00000534825 SPATA31A1Q5TZJ5 1347 aa25.09■■□□□ 1.61
CAPRIN1-217ENST00000534825 A0A1W2PP64 1363 aa25.08■■□□□ 1.61
CAPRIN1-217ENST00000534825 ARHGEF25Q86VW2 580 aa25.08■■□□□ 1.61
CAPRIN1-217ENST00000534825 NME9Q86XW9 330 aa25.08■■□□□ 1.61
CAPRIN1-217ENST00000534825 KCNH5Q8NCM2 988 aa25.08■■□□□ 1.61
CAPRIN1-217ENST00000534825 USP31Q70CQ4 1352 aa25.07■■□□□ 1.6
CAPRIN1-217ENST00000534825 NINLQ9Y2I6 1382 aa25.07■■□□□ 1.6
CAPRIN1-217ENST00000534825 AATKQ6ZMQ8 1374 aa25.06■■□□□ 1.6
CAPRIN1-217ENST00000534825 LARP1Q6PKG0 1096 aaKnown RBP25.06■■□□□ 1.6
CAPRIN1-217ENST00000534825 EDC4Q6P2E9 1401 aaKnown RBP25.05■■□□□ 1.6
CAPRIN1-217ENST00000534825 AXIN2Q9Y2T1 843 aa25.05■■□□□ 1.6
CAPRIN1-217ENST00000534825 MON2Q7Z3U7 1717 aa25.05■■□□□ 1.6
CAPRIN1-217ENST00000534825 LMO7Q8WWI1 1683 aa25.04■■□□□ 1.6
CAPRIN1-217ENST00000534825 KRT27Q7Z3Y8 459 aa25.04■■□□□ 1.6
CAPRIN1-217ENST00000534825 ZBTB7CA1YPR0 619 aa25.03■■□□□ 1.6
CAPRIN1-217ENST00000534825 SOX12O15370 315 aa25.03■■□□□ 1.6
CAPRIN1-217ENST00000534825 EP400Q96L91 3159 aa25.02■■□□□ 1.6
CAPRIN1-217ENST00000534825 CDCA8Q53HL2 280 aa25.02■■□□□ 1.6
CAPRIN1-217ENST00000534825 USP35Q9P2H5 1018 aa25.01■■□□□ 1.59
CAPRIN1-217ENST00000534825 A0A0G2JS52 829 aa25■■□□□ 1.59
CAPRIN1-217ENST00000534825 MYT1Q01538 1121 aa25■■□□□ 1.59
CAPRIN1-217ENST00000534825 BARGINQ6ZT62 677 aa25■■□□□ 1.59
CAPRIN1-217ENST00000534825 CCDC125Q86Z20 511 aa25■■□□□ 1.59
CAPRIN1-217ENST00000534825 COL5A2P05997 1499 aaPredicted RBP25■■□□□ 1.59
CAPRIN1-217ENST00000534825 BRWD3Q6RI45 1802 aa25■■□□□ 1.59
CAPRIN1-217ENST00000534825 ANKRD36BQ8N2N9 1353 aa24.99■■□□□ 1.59
CAPRIN1-217ENST00000534825 TCP11L2Q8N4U5 519 aa24.98■■□□□ 1.59
CAPRIN1-217ENST00000534825 COL18A1P39060 1754 aa24.98■■□□□ 1.59
CAPRIN1-217ENST00000534825 NFAT5O94916 1531 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms