RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 RALGAPBQ86X10 1494 aa14.89□□□□□ -0.03
CSDE1-217ENST00000534699 NUTM2FA1L443 756 aa14.89□□□□□ -0.03
CSDE1-217ENST00000534699 EVC2Q86UK5 1308 aa14.88□□□□□ -0.03
CSDE1-217ENST00000534699 ONECUT3O60422 494 aaPredicted RBP14.88□□□□□ -0.03
CSDE1-217ENST00000534699 HAP1P54257 671 aaPredicted RBP14.88□□□□□ -0.03
CSDE1-217ENST00000534699 GLI3P10071 1580 aa14.88□□□□□ -0.03
CSDE1-217ENST00000534699 AKAP12Q02952 1782 aa14.88□□□□□ -0.03
CSDE1-217ENST00000534699 CLSPNQ9HAW4 1339 aa14.86□□□□□ -0.03
CSDE1-217ENST00000534699 XPCQ01831 940 aaPredicted RBP14.86□□□□□ -0.03
CSDE1-217ENST00000534699 TIMELESSQ9UNS1 1208 aa14.86□□□□□ -0.03
CSDE1-217ENST00000534699 USP54Q70EL1 1684 aa14.86□□□□□ -0.03
CSDE1-217ENST00000534699 ROCK2O75116 1388 aaKnown RBP14.86□□□□□ -0.03
CSDE1-217ENST00000534699 NBPF1Q3BBV0 1214 aa14.86□□□□□ -0.03
CSDE1-217ENST00000534699 PMFBP1Q8TBY8 1022 aa14.86□□□□□ -0.03
CSDE1-217ENST00000534699 CPDO75976 1380 aa14.85□□□□□ -0.03
CSDE1-217ENST00000534699 ABCC6O95255 1503 aa14.85□□□□□ -0.03
CSDE1-217ENST00000534699 ZNF692Q9BU19 519 aaPredicted RBP14.85□□□□□ -0.03
CSDE1-217ENST00000534699 HIRIP3Q9BW71 556 aaPredicted RBP14.85□□□□□ -0.03
CSDE1-217ENST00000534699 PPIP5K1Q6PFW1 1433 aa14.85□□□□□ -0.03
CSDE1-217ENST00000534699 NBPF8Q3BBV2 869 aa14.84□□□□□ -0.03
CSDE1-217ENST00000534699 USP19O94966 1318 aa14.84□□□□□ -0.03
CSDE1-217ENST00000534699 ACEP12821 1306 aa14.84□□□□□ -0.03
CSDE1-217ENST00000534699 TONSLQ96HA7 1378 aa14.83□□□□□ -0.03
CSDE1-217ENST00000534699 NRKQ7Z2Y5 1582 aa14.83□□□□□ -0.04
CSDE1-217ENST00000534699 SLIT3O75094 1523 aa14.82□□□□□ -0.04
CSDE1-217ENST00000534699 NINLQ9Y2I6 1382 aa14.81□□□□□ -0.04
CSDE1-217ENST00000534699 C11orf95C9JLR9 678 aaPredicted RBP14.81□□□□□ -0.04
CSDE1-217ENST00000534699 NLRP13Q86W25 1043 aa14.81□□□□□ -0.04
CSDE1-217ENST00000534699 USP6P35125 1406 aa14.81□□□□□ -0.04
CSDE1-217ENST00000534699 SSH2Q76I76 1423 aa14.81□□□□□ -0.04
CSDE1-217ENST00000534699 THSD7AQ9UPZ6 1657 aa14.81□□□□□ -0.04
CSDE1-217ENST00000534699 TTC21AQ8NDW8 1320 aa14.81□□□□□ -0.04
CSDE1-217ENST00000534699 MON2Q7Z3U7 1717 aa14.81□□□□□ -0.04
CSDE1-217ENST00000534699 LMO7Q8WWI1 1683 aa14.81□□□□□ -0.04
CSDE1-217ENST00000534699 SRPK2P78362 688 aaKnown RBP14.8□□□□□ -0.04
CSDE1-217ENST00000534699 BRWD3Q6RI45 1802 aa14.8□□□□□ -0.04
CSDE1-217ENST00000534699 SIN3AQ96ST3 1273 aa14.8□□□□□ -0.04
CSDE1-217ENST00000534699 FAM83GA6ND36 823 aa14.79□□□□□ -0.04
CSDE1-217ENST00000534699 BLMP54132 1417 aaPredicted RBP14.78□□□□□ -0.04
CSDE1-217ENST00000534699 LMOD2Q6P5Q4 547 aa14.78□□□□□ -0.04
CSDE1-217ENST00000534699 RGPD1P0DJD0 1748 aa14.78□□□□□ -0.04
CSDE1-217ENST00000534699 CPSF1Q10570 1443 aaKnown RBP14.77□□□□□ -0.04
CSDE1-217ENST00000534699 SPATA31A5Q5VU36 1347 aa14.77□□□□□ -0.05
CSDE1-217ENST00000534699 SPATA31A7Q8IWB4 1347 aa14.77□□□□□ -0.05
CSDE1-217ENST00000534699 THRAP3Q9Y2W1 955 aaKnown RBP14.77□□□□□ -0.05
CSDE1-217ENST00000534699 PAK3O75914 559 aaPredicted RBP14.76□□□□□ -0.05
CSDE1-217ENST00000534699 NEUROD1Q13562 356 aa14.76□□□□□ -0.05
CSDE1-217ENST00000534699 PRDM11Q9NQV5 511 aa14.76□□□□□ -0.05
CSDE1-217ENST00000534699 BARGINQ6ZT62 677 aa14.75□□□□□ -0.05
CSDE1-217ENST00000534699 KCNH5Q8NCM2 988 aa14.75□□□□□ -0.05
CSDE1-217ENST00000534699 CABLES1Q8TDN4 633 aa14.75□□□□□ -0.05
CSDE1-217ENST00000534699 PIK3C2AO00443 1686 aa14.74□□□□□ -0.05
CSDE1-217ENST00000534699 USP31Q70CQ4 1352 aa14.74□□□□□ -0.05
CSDE1-217ENST00000534699 ABTB2Q8N961 1025 aa14.74□□□□□ -0.05
CSDE1-217ENST00000534699 AATKQ6ZMQ8 1374 aa14.74□□□□□ -0.05
CSDE1-217ENST00000534699 CARD11Q9BXL7 1154 aa14.74□□□□□ -0.05
CSDE1-217ENST00000534699 BTG4Q9NY30 223 aa14.74□□□□□ -0.05
CSDE1-217ENST00000534699 CABP2Q9NPB3 220 aa14.73□□□□□ -0.05
CSDE1-217ENST00000534699 PARP4Q9UKK3 1724 aaKnown RBP14.73□□□□□ -0.05
CSDE1-217ENST00000534699 COL18A1P39060 1754 aa14.73□□□□□ -0.05
CSDE1-217ENST00000534699 SEPT12Q8IYM1 358 aa14.73□□□□□ -0.05
CSDE1-217ENST00000534699 KIAA0232Q92628 1395 aa14.73□□□□□ -0.05
CSDE1-217ENST00000534699 KRT27Q7Z3Y8 459 aa14.72□□□□□ -0.05
CSDE1-217ENST00000534699 CABP1Q9NZU7 370 aa14.72□□□□□ -0.05
CSDE1-217ENST00000534699 SPATA31A1Q5TZJ5 1347 aa14.72□□□□□ -0.05
CSDE1-217ENST00000534699 DISP2A7MBM2 1401 aa14.71□□□□□ -0.05
CSDE1-217ENST00000534699 WNK3Q9BYP7 1800 aa14.71□□□□□ -0.05
CSDE1-217ENST00000534699 TTC21BQ7Z4L5 1316 aa14.7□□□□□ -0.06
CSDE1-217ENST00000534699 GCP02774 474 aa14.7□□□□□ -0.06
CSDE1-217ENST00000534699 CDCA7Q9BWT1 371 aaPredicted RBP14.7□□□□□ -0.06
CSDE1-217ENST00000534699 EDC4Q6P2E9 1401 aaKnown RBP14.7□□□□□ -0.06
CSDE1-217ENST00000534699 CAMTA1Q9Y6Y1 1673 aa14.69□□□□□ -0.06
CSDE1-217ENST00000534699 SF3B2Q13435 895 aaKnown RBP14.69□□□□□ -0.06
CSDE1-217ENST00000534699 CCDC9Q9Y3X0 531 aaKnown RBP14.69□□□□□ -0.06
CSDE1-217ENST00000534699 PARD3Q8TEW0 1356 aa14.69□□□□□ -0.06
CSDE1-217ENST00000534699 HDGFL2Q7Z4V5 671 aaPredicted RBP14.69□□□□□ -0.06
CSDE1-217ENST00000534699 TERF2IPQ9NYB0 399 aa14.69□□□□□ -0.06
CSDE1-217ENST00000534699 KTN1Q86UP2 1357 aaKnown RBP14.68□□□□□ -0.06
CSDE1-217ENST00000534699 CDCA8Q53HL2 280 aa14.68□□□□□ -0.06
CSDE1-217ENST00000534699 COL5A2P05997 1499 aaPredicted RBP14.68□□□□□ -0.06
CSDE1-217ENST00000534699 FAM208AQ9UK61 1670 aaKnown RBP14.68□□□□□ -0.06
CSDE1-217ENST00000534699 CRB1P82279 1406 aa14.67□□□□□ -0.06
CSDE1-217ENST00000534699 RGPD3A6NKT7 1758 aaPredicted RBP14.67□□□□□ -0.06
CSDE1-217ENST00000534699 RGPD4Q7Z3J3 1758 aa14.67□□□□□ -0.06
CSDE1-217ENST00000534699 NFAT5O94916 1531 aa14.67□□□□□ -0.06
CSDE1-217ENST00000534699 EVA1CP58658 441 aa14.67□□□□□ -0.06
CSDE1-217ENST00000534699 NLRP6P59044 892 aa14.66□□□□□ -0.06
CSDE1-217ENST00000534699 BCL9O00512 1426 aa14.66□□□□□ -0.06
CSDE1-217ENST00000534699 TNS1Q9HBL0 1735 aaKnown RBP14.66□□□□□ -0.06
CSDE1-217ENST00000534699 TCP11L2Q8N4U5 519 aa14.65□□□□□ -0.06
CSDE1-217ENST00000534699 CD163L1Q9NR16 1453 aa14.65□□□□□ -0.06
CSDE1-217ENST00000534699 FAM196AQ6ZSG2 479 aa14.65□□□□□ -0.06
CSDE1-217ENST00000534699 ZRANB1Q9UGI0 708 aa14.64□□□□□ -0.07
CSDE1-217ENST00000534699 BAG6P46379 1132 aa14.64□□□□□ -0.07
CSDE1-217ENST00000534699 CCDC7Q96M83 1385 aa14.63□□□□□ -0.07
CSDE1-217ENST00000534699 ARHGEF25Q86VW2 580 aa14.63□□□□□ -0.07
CSDE1-217ENST00000534699 ZC3H6P61129 1189 aaKnown RBP14.63□□□□□ -0.07
CSDE1-217ENST00000534699 FAM98CQ17RN3 349 aaKnown RBP14.62□□□□□ -0.07
CSDE1-217ENST00000534699 TESK2Q96S53 571 aa14.62□□□□□ -0.07
CSDE1-217ENST00000534699 TMF1P82094 1093 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms