RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 NUDT16Q96DE0 195 aaKnown RBP22.96■■□□□ 1.27
VPS51-216ENST00000534591 CCDC61Q9Y6R9 512 aa22.96■■□□□ 1.27
VPS51-216ENST00000534591 MORC1Q86VD1 984 aa22.94■■□□□ 1.26
VPS51-216ENST00000534591 INSRP06213 1382 aa22.94■■□□□ 1.26
VPS51-216ENST00000534591 PPIP5K1Q6PFW1 1433 aa22.94■■□□□ 1.26
VPS51-216ENST00000534591 ILDR2Q71H61 639 aa22.93■■□□□ 1.26
VPS51-216ENST00000534591 ORAI2Q96SN7 254 aa22.92■■□□□ 1.26
VPS51-216ENST00000534591 CPSF1Q10570 1443 aaKnown RBP22.91■■□□□ 1.26
VPS51-216ENST00000534591 JCADQ9P266 1359 aa22.9■■□□□ 1.26
VPS51-216ENST00000534591 NUTM2FA1L443 756 aa22.9■■□□□ 1.26
VPS51-216ENST00000534591 LRP6O75581 1613 aa22.89■■□□□ 1.26
VPS51-216ENST00000534591 PRR36Q9H6K5 1346 aa22.89■■□□□ 1.25
VPS51-216ENST00000534591 ZBED9Q6R2W3 1325 aa22.88■■□□□ 1.25
VPS51-216ENST00000534591 ZNF692Q9BU19 519 aaPredicted RBP22.87■■□□□ 1.25
VPS51-216ENST00000534591 TOPAZ1Q8N9V7 1692 aa22.87■■□□□ 1.25
VPS51-216ENST00000534591 EDC4Q6P2E9 1401 aaKnown RBP22.87■■□□□ 1.25
VPS51-216ENST00000534591 ANKRD26Q9UPS8 1709 aa22.86■■□□□ 1.25
VPS51-216ENST00000534591 KIF1AQ12756 1690 aa22.86■■□□□ 1.25
VPS51-216ENST00000534591 PLEKHG3A1L390 1219 aa22.86■■□□□ 1.25
VPS51-216ENST00000534591 FYB1O15117 783 aa22.85■■□□□ 1.25
VPS51-216ENST00000534591 ITSN1Q15811 1721 aa22.84■■□□□ 1.25
VPS51-216ENST00000534591 POLR3AO14802 1390 aaPredicted RBP22.84■■□□□ 1.25
VPS51-216ENST00000534591 AKAP12Q02952 1782 aa22.84■■□□□ 1.25
VPS51-216ENST00000534591 KIF20BQ96Q89 1820 aa22.84■■□□□ 1.25
VPS51-216ENST00000534591 ANKARQ7Z5J8 1434 aa22.84■■□□□ 1.25
VPS51-216ENST00000534591 MON2Q7Z3U7 1717 aa22.83■■□□□ 1.24
VPS51-216ENST00000534591 PHF23Q9BUL5 403 aaPredicted RBP22.82■■□□□ 1.24
VPS51-216ENST00000534591 PXDNQ92626 1479 aa22.82■■□□□ 1.24
VPS51-216ENST00000534591 WDR43Q15061 677 aaKnown RBP eCLIP22.82■■□□□ 1.24
VPS51-216ENST00000534591 ESCO1Q5FWF5 840 aa22.82■■□□□ 1.24
VPS51-216ENST00000534591 GGNBP2Q9H3C7 697 aa22.81■■□□□ 1.24
VPS51-216ENST00000534591 RGS17Q9UGC6 210 aaPredicted RBP22.81■■□□□ 1.24
VPS51-216ENST00000534591 BLMP54132 1417 aaPredicted RBP22.8■■□□□ 1.24
VPS51-216ENST00000534591 PNPLA6Q8IY17 1366 aa22.8■■□□□ 1.24
VPS51-216ENST00000534591 SOS2Q07890 1332 aaPredicted RBP22.79■■□□□ 1.24
VPS51-216ENST00000534591 COL22A1Q8NFW1 1626 aaPredicted RBP22.78■■□□□ 1.24
VPS51-216ENST00000534591 TNNT2P45379 298 aaPredicted RBP22.77■■□□□ 1.24
VPS51-216ENST00000534591 XPCQ01831 940 aaPredicted RBP22.77■■□□□ 1.24
VPS51-216ENST00000534591 CFAP53Q96M91 514 aa22.77■■□□□ 1.24
VPS51-216ENST00000534591 ACEP12821 1306 aa22.77■■□□□ 1.24
VPS51-216ENST00000534591 SPATA31A6Q5VVP1 1343 aa22.77■■□□□ 1.24
VPS51-216ENST00000534591 FOXO3O43524 673 aa22.76■■□□□ 1.23
VPS51-216ENST00000534591 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.76■■□□□ 1.23
VPS51-216ENST00000534591 ADAMTS8Q9UP79 889 aa22.76■■□□□ 1.23
VPS51-216ENST00000534591 MTHFSP49914 203 aa22.75■■□□□ 1.23
VPS51-216ENST00000534591 LRRC59Q96AG4 307 aaKnown RBP22.75■■□□□ 1.23
VPS51-216ENST00000534591 USP6P35125 1406 aa22.73■■□□□ 1.23
VPS51-216ENST00000534591 NPHP3Q7Z494 1330 aa22.73■■□□□ 1.23
VPS51-216ENST00000534591 NUTM2BA6NNL0 878 aaPredicted RBP22.72■■□□□ 1.23
VPS51-216ENST00000534591 NUTM2EB1AL46 878 aaPredicted RBP22.72■■□□□ 1.23
VPS51-216ENST00000534591 NUTM2AQ8IVF1 878 aaPredicted RBP22.72■■□□□ 1.23
VPS51-216ENST00000534591 GTF3C3Q9Y5Q9 886 aa22.72■■□□□ 1.23
VPS51-216ENST00000534591 TRPM3Q9HCF6 1732 aaPredicted RBP22.72■■□□□ 1.23
VPS51-216ENST00000534591 MARF1Q9Y4F3 1742 aaKnown RBP22.72■■□□□ 1.23
VPS51-216ENST00000534591 NRKQ7Z2Y5 1582 aa22.72■■□□□ 1.23
VPS51-216ENST00000534591 TTC21BQ7Z4L5 1316 aa22.71■■□□□ 1.23
VPS51-216ENST00000534591 SOCS7O14512 581 aa22.7■■□□□ 1.22
VPS51-216ENST00000534591 NME9Q86XW9 330 aa22.7■■□□□ 1.22
VPS51-216ENST00000534591 ABCA3Q99758 1704 aa22.7■■□□□ 1.22
VPS51-216ENST00000534591 SSH2Q76I76 1423 aa22.7■■□□□ 1.22
VPS51-216ENST00000534591 NGDNQ8NEJ9 315 aaKnown RBP22.69■■□□□ 1.22
VPS51-216ENST00000534591 COG3Q96JB2 828 aa22.69■■□□□ 1.22
VPS51-216ENST00000534591 PHF8Q9UPP1 1060 aa22.69■■□□□ 1.22
VPS51-216ENST00000534591 TTC21AQ8NDW8 1320 aa22.69■■□□□ 1.22
VPS51-216ENST00000534591 POTEAQ6S8J7 498 aa22.67■■□□□ 1.22
VPS51-216ENST00000534591 AATKQ6ZMQ8 1374 aa22.67■■□□□ 1.22
VPS51-216ENST00000534591 PMFBP1Q8TBY8 1022 aa22.67■■□□□ 1.22
VPS51-216ENST00000534591 MEX3CQ5U5Q3 659 aaKnown RBP22.66■■□□□ 1.22
VPS51-216ENST00000534591 ALS2Q96Q42 1657 aa22.66■■□□□ 1.22
VPS51-216ENST00000534591 PDE3BQ13370 1112 aa22.65■■□□□ 1.22
VPS51-216ENST00000534591 SMG6Q86US8 1419 aaKnown RBP22.64■■□□□ 1.21
VPS51-216ENST00000534591 NGEFQ8N5V2 710 aa22.63■■□□□ 1.21
VPS51-216ENST00000534591 KRT28Q7Z3Y7 464 aa22.62■■□□□ 1.21
VPS51-216ENST00000534591 NUDCQ9Y266 331 aa22.62■■□□□ 1.21
VPS51-216ENST00000534591 TNS3Q68CZ2 1445 aa22.62■■□□□ 1.21
VPS51-216ENST00000534591 COL3A1P02461 1466 aaPredicted RBP22.62■■□□□ 1.21
VPS51-216ENST00000534591 POLKQ9UBT6 870 aa22.62■■□□□ 1.21
VPS51-216ENST00000534591 ZRANB1Q9UGI0 708 aa22.62■■□□□ 1.21
VPS51-216ENST00000534591 SPATA31A3Q5VYP0 1347 aa22.61■■□□□ 1.21
VPS51-216ENST00000534591 OVOS2A0A0J9YW53 1432 aa22.61■■□□□ 1.21
VPS51-216ENST00000534591 OVOS2Q6IE36 1432 aa22.61■■□□□ 1.21
VPS51-216ENST00000534591 CRYBG1Q9Y4K1 1723 aa22.61■■□□□ 1.21
VPS51-216ENST00000534591 ADAMTS2O95450 1211 aa22.6■■□□□ 1.21
VPS51-216ENST00000534591 MAP2P11137 1827 aaKnown RBP22.6■■□□□ 1.21
VPS51-216ENST00000534591 USP31Q70CQ4 1352 aa22.6■■□□□ 1.21
VPS51-216ENST00000534591 C8orf37Q96NL8 207 aa22.58■■□□□ 1.21
VPS51-216ENST00000534591 AFF2P51816 1311 aa22.57■■□□□ 1.2
VPS51-216ENST00000534591 CDK12Q9NYV4 1490 aaPredicted RBP22.57■■□□□ 1.2
VPS51-216ENST00000534591 DIAPH1O60610 1272 aaKnown RBP22.57■■□□□ 1.2
VPS51-216ENST00000534591 SBNO1A3KN83 1393 aa22.56■■□□□ 1.2
VPS51-216ENST00000534591 PSME1Q06323 249 aa22.56■■□□□ 1.2
VPS51-216ENST00000534591 CCDC146Q8IYE0 955 aa22.56■■□□□ 1.2
VPS51-216ENST00000534591 RUNDC1Q96C34 613 aa22.56■■□□□ 1.2
VPS51-216ENST00000534591 SENP3-EIF4A1A0A087X0R7 540 aa22.55■■□□□ 1.2
VPS51-216ENST00000534591 PLCH1Q4KWH8 1693 aa22.54■■□□□ 1.2
VPS51-216ENST00000534591 U2AF1L5P0DN76 240 aaPredicted RBP22.54■■□□□ 1.2
VPS51-216ENST00000534591 U2AF1Q01081 240 aaKnown RBP eCLIP22.54■■□□□ 1.2
VPS51-216ENST00000534591 SALL2Q9Y467 1007 aaPredicted RBP22.54■■□□□ 1.2
VPS51-216ENST00000534591 USP54Q70EL1 1684 aa22.54■■□□□ 1.2
VPS51-216ENST00000534591 APAF1O14727 1248 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms