RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 ANO2Q9NQ90 1003 aa12.39□□□□□ -0.43
NCAPD3-214ENST00000534548 CROCC2H7BZ55 1655 aa12.39□□□□□ -0.43
NCAPD3-214ENST00000534548 SPINK5Q9NQ38 1064 aaPredicted RBP12.39□□□□□ -0.43
NCAPD3-214ENST00000534548 ABCA8O94911 1581 aa12.39□□□□□ -0.43
NCAPD3-214ENST00000534548 TRAK1Q9UPV9 953 aa12.39□□□□□ -0.43
NCAPD3-214ENST00000534548 ERICH4A6NGS2 130 aa12.38□□□□□ -0.43
NCAPD3-214ENST00000534548 KANK1Q14678 1352 aa12.38□□□□□ -0.43
NCAPD3-214ENST00000534548 HDGFL2Q7Z4V5 671 aaPredicted RBP12.38□□□□□ -0.43
NCAPD3-214ENST00000534548 CCDC112Q8NEF3 446 aa12.38□□□□□ -0.43
NCAPD3-214ENST00000534548 KDM5DQ9BY66 1539 aa12.38□□□□□ -0.43
NCAPD3-214ENST00000534548 SYCE3A1L190 88 aa12.38□□□□□ -0.43
NCAPD3-214ENST00000534548 C8orf34Q49A92 452 aa12.38□□□□□ -0.43
NCAPD3-214ENST00000534548 RTF1Q92541 710 aaKnown RBP12.38□□□□□ -0.43
NCAPD3-214ENST00000534548 NPHP1O15259 732 aa12.37□□□□□ -0.43
NCAPD3-214ENST00000534548 PPP4R3BQ5MIZ7 849 aa12.37□□□□□ -0.43
NCAPD3-214ENST00000534548 TRIM5Q9C035 493 aa12.37□□□□□ -0.43
NCAPD3-214ENST00000534548 SMC3Q9UQE7 1217 aa12.37□□□□□ -0.43
NCAPD3-214ENST00000534548 SAMD9LQ8IVG5 1584 aa12.37□□□□□ -0.43
NCAPD3-214ENST00000534548 VPS37CA5D8V6 355 aaPredicted RBP12.37□□□□□ -0.43
NCAPD3-214ENST00000534548 BICD2Q8TD16 824 aa12.37□□□□□ -0.43
NCAPD3-214ENST00000534548 H3BQV1 296 aa12.37□□□□□ -0.43
NCAPD3-214ENST00000534548 IFFO2Q5TF58 517 aa12.37□□□□□ -0.43
NCAPD3-214ENST00000534548 ADCY10Q96PN6 1610 aa12.36□□□□□ -0.43
NCAPD3-214ENST00000534548 SLFN5Q08AF3 891 aa12.36□□□□□ -0.43
NCAPD3-214ENST00000534548 NOC3LQ8WTT2 800 aaKnown RBP12.36□□□□□ -0.43
NCAPD3-214ENST00000534548 GPRASP1Q5JY77 1395 aa12.36□□□□□ -0.43
NCAPD3-214ENST00000534548 NEK4P51957 841 aa12.36□□□□□ -0.43
NCAPD3-214ENST00000534548 STK31Q9BXU1 1019 aa12.36□□□□□ -0.43
NCAPD3-214ENST00000534548 SF3A1Q15459 793 aaKnown RBP12.36□□□□□ -0.43
NCAPD3-214ENST00000534548 C14orf37Q86TY3 774 aa12.35□□□□□ -0.43
NCAPD3-214ENST00000534548 TBC1D32Q96NH3 1257 aa12.35□□□□□ -0.43
NCAPD3-214ENST00000534548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.35□□□□□ -0.43
NCAPD3-214ENST00000534548 MCM5P33992 734 aa12.35□□□□□ -0.43
NCAPD3-214ENST00000534548 GGT6Q6P531 493 aa12.35□□□□□ -0.43
NCAPD3-214ENST00000534548 TCP11L2Q8N4U5 519 aa12.35□□□□□ -0.43
NCAPD3-214ENST00000534548 DMRT2Q9Y5R5 561 aa12.35□□□□□ -0.43
NCAPD3-214ENST00000534548 SSFA2P28290 1259 aa12.34□□□□□ -0.43
NCAPD3-214ENST00000534548 STK26Q9P289 416 aa12.34□□□□□ -0.43
NCAPD3-214ENST00000534548 SPDYE4A6NLX3 237 aa12.34□□□□□ -0.43
NCAPD3-214ENST00000534548 LMOD3Q0VAK6 560 aa12.34□□□□□ -0.43
NCAPD3-214ENST00000534548 GPATCH3Q96I76 525 aa12.34□□□□□ -0.43
NCAPD3-214ENST00000534548 OFD1O75665 1012 aa12.34□□□□□ -0.43
NCAPD3-214ENST00000534548 MVPQ14764 893 aaKnown RBP12.34□□□□□ -0.43
NCAPD3-214ENST00000534548 MAGI2Q86UL8 1455 aa12.34□□□□□ -0.43
NCAPD3-214ENST00000534548 TRAPPC8Q9Y2L5 1435 aa12.34□□□□□ -0.43
NCAPD3-214ENST00000534548 RIPK4P57078 832 aa12.34□□□□□ -0.43
NCAPD3-214ENST00000534548 TMEM132EQ6IEE7 984 aa12.34□□□□□ -0.43
NCAPD3-214ENST00000534548 API5Q9BZZ5 524 aaKnown RBP12.33□□□□□ -0.44
NCAPD3-214ENST00000534548 CCDC27Q2M243 656 aa12.33□□□□□ -0.44
NCAPD3-214ENST00000534548 ADGRF5Q8IZF2 1346 aa12.33□□□□□ -0.44
NCAPD3-214ENST00000534548 FAM184AQ8NB25 1140 aa12.33□□□□□ -0.44
NCAPD3-214ENST00000534548 BLMP54132 1417 aaPredicted RBP12.32□□□□□ -0.44
NCAPD3-214ENST00000534548 MCM2P49736 904 aa12.32□□□□□ -0.44
NCAPD3-214ENST00000534548 SLC12A5Q9H2X9 1139 aa12.32□□□□□ -0.44
NCAPD3-214ENST00000534548 PLEKHG5O94827 1062 aa12.32□□□□□ -0.44
NCAPD3-214ENST00000534548 SMAP1Q8IYB5 467 aaPredicted RBP12.32□□□□□ -0.44
NCAPD3-214ENST00000534548 SOX12O15370 315 aa12.32□□□□□ -0.44
NCAPD3-214ENST00000534548 FIBPO43427 364 aa12.32□□□□□ -0.44
NCAPD3-214ENST00000534548 GCC1Q96CN9 775 aa12.32□□□□□ -0.44
NCAPD3-214ENST00000534548 ARHGEF5Q12774 1597 aa12.31□□□□□ -0.44
NCAPD3-214ENST00000534548 IGHDP01880 384 aa12.31□□□□□ -0.44
NCAPD3-214ENST00000534548 GORABQ5T7V8 394 aa12.31□□□□□ -0.44
NCAPD3-214ENST00000534548 PLPPR3Q6T4P5 718 aa12.31□□□□□ -0.44
NCAPD3-214ENST00000534548 TRPM1Q7Z4N2 1603 aa12.31□□□□□ -0.44
NCAPD3-214ENST00000534548 HSP90B2PQ58FF3 399 aa12.31□□□□□ -0.44
NCAPD3-214ENST00000534548 AEBP1Q8IUX7 1158 aa12.31□□□□□ -0.44
NCAPD3-214ENST00000534548 FBXW7Q969H0 707 aa12.31□□□□□ -0.44
NCAPD3-214ENST00000534548 CHD1LQ86WJ1 897 aa12.31□□□□□ -0.44
NCAPD3-214ENST00000534548 TERF2IPQ9NYB0 399 aa12.31□□□□□ -0.44
NCAPD3-214ENST00000534548 EXOSC9Q06265 439 aaKnown RBP12.3□□□□□ -0.44
NCAPD3-214ENST00000534548 TTC37Q6PGP7 1564 aa12.3□□□□□ -0.44
NCAPD3-214ENST00000534548 CCDC94Q9BW85 323 aaPredicted RBP12.3□□□□□ -0.44
NCAPD3-214ENST00000534548 CARD14Q9BXL6 1004 aa12.3□□□□□ -0.44
NCAPD3-214ENST00000534548 KLHL40Q2TBA0 621 aa12.3□□□□□ -0.44
NCAPD3-214ENST00000534548 LEKR1Q6ZMV7 388 aa12.3□□□□□ -0.44
NCAPD3-214ENST00000534548 CALCOCO1Q9P1Z2 691 aa12.3□□□□□ -0.44
NCAPD3-214ENST00000534548 CCDC192P0DO97 292 aa12.3□□□□□ -0.44
NCAPD3-214ENST00000534548 PRIMPOLQ96LW4 560 aa12.3□□□□□ -0.44
NCAPD3-214ENST00000534548 C1orf115Q9H7X2 142 aa12.29□□□□□ -0.44
NCAPD3-214ENST00000534548 NOB1Q9ULX3 412 aaKnown RBP12.29□□□□□ -0.44
NCAPD3-214ENST00000534548 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.29□□□□□ -0.44
NCAPD3-214ENST00000534548 SCAPERQ9BY12 1400 aa12.29□□□□□ -0.44
NCAPD3-214ENST00000534548 KDM2BQ8NHM5 1336 aa12.29□□□□□ -0.44
NCAPD3-214ENST00000534548 GTPBP4Q9BZE4 634 aaKnown RBP12.29□□□□□ -0.44
NCAPD3-214ENST00000534548 TSPYL1Q9H0U9 437 aa12.29□□□□□ -0.44
NCAPD3-214ENST00000534548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.29□□□□□ -0.441e-5■■■■□ 25.8
NCAPD3-214ENST00000534548 ZKSCAN1P17029 563 aaPredicted RBP12.29□□□□□ -0.44
NCAPD3-214ENST00000534548 AK7Q96M32 723 aa12.29□□□□□ -0.44
NCAPD3-214ENST00000534548 TRERF1Q96PN7 1200 aa12.29□□□□□ -0.44
NCAPD3-214ENST00000534548 CDC42BPBQ9Y5S2 1711 aa12.28□□□□□ -0.44
NCAPD3-214ENST00000534548 ZMYM4Q5VZL5 1548 aa12.28□□□□□ -0.44
NCAPD3-214ENST00000534548 CREBRFQ8IUR6 639 aa12.28□□□□□ -0.44
NCAPD3-214ENST00000534548 BAG4O95429 457 aaKnown RBP12.28□□□□□ -0.44
NCAPD3-214ENST00000534548 ACBD3Q9H3P7 528 aa12.28□□□□□ -0.44
NCAPD3-214ENST00000534548 WDR7Q9Y4E6 1490 aa12.28□□□□□ -0.44
NCAPD3-214ENST00000534548 WDR33Q9C0J8 1336 aaKnown RBP12.27□□□□□ -0.44
NCAPD3-214ENST00000534548 TNNQ9UQP3 1299 aa12.27□□□□□ -0.44
NCAPD3-214ENST00000534548 CCDC34Q96HJ3 373 aa12.27□□□□□ -0.45
NCAPD3-214ENST00000534548 SCAF11Q99590 1463 aaKnown RBP12.27□□□□□ -0.45
NCAPD3-214ENST00000534548 ZSCAN23Q3MJ62 389 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms