RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	BEGAIN	Q9BUH8	593 aa		10.9	□□□□□ -0.66
PICALM-223	ENST00000534412	ADCY10	Q96PN6	1610 aa		10.89	□□□□□ -0.67
PICALM-223	ENST00000534412	MMP16	P51512	607 aa		10.89	□□□□□ -0.67
PICALM-223	ENST00000534412	DIXDC1	Q155Q3	683 aa		10.89	□□□□□ -0.67
PICALM-223	ENST00000534412	PARP9	Q8IXQ6	854 aa		10.89	□□□□□ -0.67
PICALM-223	ENST00000534412	SPIRE2	Q8WWL2	714 aa		10.89	□□□□□ -0.67
PICALM-223	ENST00000534412	C6orf229	H3BNL8	230 aa		10.88	□□□□□ -0.67
PICALM-223	ENST00000534412	TRAF7	Q6Q0C0	670 aa		10.88	□□□□□ -0.67
PICALM-223	ENST00000534412	PRR20E	P86478	221 aa		10.87	□□□□□ -0.67
PICALM-223	ENST00000534412	PRR20C	P86479	221 aa		10.87	□□□□□ -0.67
PICALM-223	ENST00000534412	PRR20D	P86480	221 aa		10.87	□□□□□ -0.67
PICALM-223	ENST00000534412	PRR20B	P86481	221 aa		10.87	□□□□□ -0.67
PICALM-223	ENST00000534412	PRR20A	P86496	221 aa		10.87	□□□□□ -0.67
PICALM-223	ENST00000534412	CCDC24	Q8N4L8	307 aa		10.87	□□□□□ -0.67
PICALM-223	ENST00000534412	SLC24A3	Q9HC58	644 aa		10.87	□□□□□ -0.67
PICALM-223	ENST00000534412	TNFRSF10A	O00220	468 aa		10.86	□□□□□ -0.67
PICALM-223	ENST00000534412	DXO	O77932	396 aa	Known RBP	10.86	□□□□□ -0.67
PICALM-223	ENST00000534412	RETREG3	Q86VR2	466 aa		10.86	□□□□□ -0.67
PICALM-223	ENST00000534412	SYMPK	Q92797	1274 aa	Known RBP	10.86	□□□□□ -0.67
PICALM-223	ENST00000534412	KDM6B	O15054	1643 aa		10.86	□□□□□ -0.67
PICALM-223	ENST00000534412	PDE4D	Q08499	809 aa		10.85	□□□□□ -0.67
PICALM-223	ENST00000534412	FOXC1	Q12948	553 aa		10.85	□□□□□ -0.67
PICALM-223	ENST00000534412	PKDCC	Q504Y2	493 aa		10.85	□□□□□ -0.67
PICALM-223	ENST00000534412	TRIM67	Q6ZTA4	783 aa		10.85	□□□□□ -0.67
PICALM-223	ENST00000534412	KIAA0586	Q9BVV6	1533 aa		10.84	□□□□□ -0.67
PICALM-223	ENST00000534412	MOXD2P	A6NHM9	499 aa		10.84	□□□□□ -0.67
PICALM-223	ENST00000534412	GDF9	O60383	454 aa		10.83	□□□□□ -0.68
PICALM-223	ENST00000534412	JUND	P17535	347 aa		10.83	□□□□□ -0.68
PICALM-223	ENST00000534412	NDUFV2	P19404	249 aa		10.83	□□□□□ -0.68
PICALM-223	ENST00000534412	MS4A1	P11836	297 aa		10.82	□□□□□ -0.68
PICALM-223	ENST00000534412	TBC1D2	Q9BYX2	928 aa		10.82	□□□□□ -0.68
PICALM-223	ENST00000534412	PCDHGC3	Q9UN70	934 aa		10.82	□□□□□ -0.68
PICALM-223	ENST00000534412	FAM187A	A6NFU0	413 aa		10.8	□□□□□ -0.68
PICALM-223	ENST00000534412	SPDYE5	A6NIY4	337 aa		10.8	□□□□□ -0.68
PICALM-223	ENST00000534412	DGAT1	O75907	488 aa		10.8	□□□□□ -0.68
PICALM-223	ENST00000534412	SUPT5H	O00267	1087 aa	Known RBP	10.79	□□□□□ -0.68
PICALM-223	ENST00000534412	GJA5	P36382	358 aa		10.79	□□□□□ -0.68
PICALM-223	ENST00000534412	TRIM32	Q13049	653 aa		10.79	□□□□□ -0.68
PICALM-223	ENST00000534412	MTMR2	Q13614	643 aa		10.79	□□□□□ -0.68
PICALM-223	ENST00000534412	IGF1R	P08069	1367 aa		10.78	□□□□□ -0.68
PICALM-223	ENST00000534412	CYP4X1	Q8N118	509 aa		10.78	□□□□□ -0.68
PICALM-223	ENST00000534412	NUDT12	Q9BQG2	462 aa		10.78	□□□□□ -0.68
PICALM-223	ENST00000534412	PKD2L1	Q9P0L9	805 aa		10.78	□□□□□ -0.68
PICALM-223	ENST00000534412	ABCC2	Q92887	1545 aa		10.78	□□□□□ -0.68
PICALM-223	ENST00000534412	CUL7	Q14999	1698 aa		10.77	□□□□□ -0.69
PICALM-223	ENST00000534412	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.77	□□□□□ -0.69
PICALM-223	ENST00000534412	GLI2	P10070	1586 aa		10.77	□□□□□ -0.69
PICALM-223	ENST00000534412	PTPRG	P23470	1445 aa		10.75	□□□□□ -0.69
PICALM-223	ENST00000534412	RIC3	Q7Z5B4	369 aa		10.75	□□□□□ -0.69
PICALM-223	ENST00000534412	PRR7	Q8TB68	274 aa		10.75	□□□□□ -0.69
PICALM-223	ENST00000534412	KIF27	Q86VH2	1401 aa		10.75	□□□□□ -0.69
PICALM-223	ENST00000534412	PLB1	Q6P1J6	1458 aa		10.74	□□□□□ -0.69
PICALM-223	ENST00000534412	PPRC1	Q5VV67	1664 aa	Known RBP	10.74	□□□□□ -0.69
PICALM-223	ENST00000534412	TTC24	A2A3L6	582 aa	Predicted RBP	10.74	□□□□□ -0.69
PICALM-223	ENST00000534412	LCE2B	O14633	110 aa		10.74	□□□□□ -0.69
PICALM-223	ENST00000534412	ASXL2	Q76L83	1435 aa		10.74	□□□□□ -0.69
PICALM-223	ENST00000534412	UHRF1BP1L	A0JNW5	1464 aa		10.74	□□□□□ -0.69
PICALM-223	ENST00000534412	ADGRL1	O94910	1474 aa		10.74	□□□□□ -0.69
PICALM-223	ENST00000534412	WNT7A	O00755	349 aa		10.73	□□□□□ -0.69
PICALM-223	ENST00000534412	SPTLC1	O15269	473 aa		10.73	□□□□□ -0.69
PICALM-223	ENST00000534412	CCNYL3	P0C7X3	344 aa		10.73	□□□□□ -0.69
PICALM-223	ENST00000534412	ZBTB3	Q9H5J0	574 aa		10.73	□□□□□ -0.69
PICALM-223	ENST00000534412	TNIK	Q9UKE5	1360 aa		10.73	□□□□□ -0.69
PICALM-223	ENST00000534412	PTPRN	Q16849	979 aa		10.72	□□□□□ -0.69
PICALM-223	ENST00000534412	DESI1	Q6ICB0	168 aa		10.72	□□□□□ -0.69
PICALM-223	ENST00000534412	TSPOAP1	O95153	1857 aa		10.72	□□□□□ -0.69
PICALM-223	ENST00000534412	WNT7B	P56706	349 aa		10.71	□□□□□ -0.69
PICALM-223	ENST00000534412	CSPP1	Q1MSJ5	1256 aa		10.71	□□□□□ -0.69
PICALM-223	ENST00000534412	CARMIL2	Q6F5E8	1435 aa		10.71	□□□□□ -0.69
PICALM-223	ENST00000534412	RSPH6A	Q9H0K4	717 aa		10.71	□□□□□ -0.69
PICALM-223	ENST00000534412	PCDHB15	Q9Y5E8	787 aa		10.71	□□□□□ -0.69
PICALM-223	ENST00000534412	COL17A1	Q9UMD9	1497 aa	Predicted RBP	10.7	□□□□□ -0.7
PICALM-223	ENST00000534412	MYT1	Q01538	1121 aa		10.7	□□□□□ -0.7
PICALM-223	ENST00000534412	PRPF38B	Q5VTL8	546 aa	Known RBP	10.7	□□□□□ -0.7
PICALM-223	ENST00000534412	TOR4A	Q9NXH8	423 aa		10.7	□□□□□ -0.7
PICALM-223	ENST00000534412	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.69	□□□□□ -0.7
PICALM-223	ENST00000534412	NUTM2E	B1AL46	878 aa	Predicted RBP	10.69	□□□□□ -0.7
PICALM-223	ENST00000534412	HRC	P23327	699 aa		10.69	□□□□□ -0.7
PICALM-223	ENST00000534412	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.69	□□□□□ -0.7
PICALM-223	ENST00000534412	MYSM1	Q5VVJ2	828 aa		10.69	□□□□□ -0.7
PICALM-223	ENST00000534412	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.69	□□□□□ -0.7
PICALM-223	ENST00000534412	SNIP1	Q8TAD8	396 aa	Known RBP	10.69	□□□□□ -0.7
PICALM-223	ENST00000534412	MRGPRX2	Q96LB1	330 aa		10.69	□□□□□ -0.7
PICALM-223	ENST00000534412	IQGAP2	Q13576	1575 aa		10.69	□□□□□ -0.7
PICALM-223	ENST00000534412	EPRS	P07814	1512 aa	Known RBP	10.68	□□□□□ -0.7
PICALM-223	ENST00000534412	KDM5B	Q9UGL1	1544 aa		10.68	□□□□□ -0.7
PICALM-223	ENST00000534412	UACA	Q9BZF9	1416 aa		10.68	□□□□□ -0.7
PICALM-223	ENST00000534412	CARMIL1	Q5VZK9	1371 aa		10.68	□□□□□ -0.7
PICALM-223	ENST00000534412	RC3H1	Q5TC82	1133 aa	Known RBP	10.68	□□□□□ -0.7
PICALM-223	ENST00000534412	ZNF787	Q6DD87	383 aa		10.68	□□□□□ -0.7
PICALM-223	ENST00000534412	EVA1B	Q9NVM1	165 aa		10.68	□□□□□ -0.7
PICALM-223	ENST00000534412	MAP3K4	Q9Y6R4	1608 aa		10.68	□□□□□ -0.7
PICALM-223	ENST00000534412	DISP1	Q96F81	1524 aa		10.68	□□□□□ -0.7
PICALM-223	ENST00000534412	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.67	□□□□□ -0.7
PICALM-223	ENST00000534412	TEX14	Q8IWB6	1497 aa		10.67	□□□□□ -0.7
PICALM-223	ENST00000534412	HECW2	Q9P2P5	1572 aa		10.66	□□□□□ -0.7
PICALM-223	ENST00000534412	CTH	P32929	405 aa		10.66	□□□□□ -0.7
PICALM-223	ENST00000534412	KCNH2	Q12809	1159 aa		10.66	□□□□□ -0.7
PICALM-223	ENST00000534412	TSC1	Q92574	1164 aa		10.66	□□□□□ -0.7
PICALM-223	ENST00000534412	SKOR1	P84550	965 aa		10.65	□□□□□ -0.7

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