RNA–Protein interactions for RNA: ENST00000534375.1

PICALM-222, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 2

Gene PICALM, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-222ENST00000534375 SLF2Q8IX21 1173 aa6.68□□□□□ -1.34
PICALM-222ENST00000534375 RDH13Q8NBN7 331 aa6.68□□□□□ -1.34
PICALM-222ENST00000534375 VRTNQ9H8Y1 702 aa6.68□□□□□ -1.34
PICALM-222ENST00000534375 CFAP99D6REC4 459 aa6.67□□□□□ -1.34
PICALM-222ENST00000534375 SWT1Q5T5J6 900 aaKnown RBP6.67□□□□□ -1.34
PICALM-222ENST00000534375 MAFBQ9Y5Q3 323 aaPredicted RBP6.67□□□□□ -1.34
PICALM-222ENST00000534375 UNCXA6NJT0 531 aa6.66□□□□□ -1.34
PICALM-222ENST00000534375 GCGRP47871 477 aa6.66□□□□□ -1.34
PICALM-222ENST00000534375 TJAP1Q5JTD0 557 aa6.66□□□□□ -1.34
PICALM-222ENST00000534375 TBC1D9Q6ZT07 1266 aa6.66□□□□□ -1.34
PICALM-222ENST00000534375 IL21Q9HBE4 155 aa6.66□□□□□ -1.34
PICALM-222ENST00000534375 AMOTL2Q9Y2J4 779 aa6.66□□□□□ -1.34
PICALM-222ENST00000534375 SLC10A3P09131 477 aa6.65□□□□□ -1.34
PICALM-222ENST00000534375 USP46P62068 366 aa6.64□□□□□ -1.35
PICALM-222ENST00000534375 MTMR2Q13614 643 aa6.64□□□□□ -1.35
PICALM-222ENST00000534375 TSC1Q92574 1164 aa6.64□□□□□ -1.35
PICALM-222ENST00000534375 MTRQ99707 1265 aa6.64□□□□□ -1.35
PICALM-222ENST00000534375 ZMIZ1Q9ULJ6 1067 aa6.64□□□□□ -1.35
PICALM-222ENST00000534375 GNEQ9Y223 722 aaKnown RBP6.64□□□□□ -1.35
PICALM-222ENST00000534375 APLP1P51693 650 aa6.63□□□□□ -1.35
PICALM-222ENST00000534375 Q6ZNB5 142 aa6.63□□□□□ -1.35
PICALM-222ENST00000534375 PRR14Q9BWN1 585 aa6.63□□□□□ -1.35
PICALM-222ENST00000534375 PER1O15534 1290 aaPredicted RBP6.62□□□□□ -1.35
PICALM-222ENST00000534375 NR6A1Q15406 480 aa6.62□□□□□ -1.35
PICALM-222ENST00000534375 PHLDB3Q6NSJ2 640 aa6.62□□□□□ -1.35
PICALM-222ENST00000534375 HELBQ8NG08 1087 aaPredicted RBP6.62□□□□□ -1.35
PICALM-222ENST00000534375 TMEM164Q5U3C3 297 aa6.61□□□□□ -1.35
PICALM-222ENST00000534375 STK32AQ8WU08 396 aa6.61□□□□□ -1.35
PICALM-222ENST00000534375 PIK3CDO00329 1044 aa6.6□□□□□ -1.35
PICALM-222ENST00000534375 ATP9BO43861 1147 aa6.6□□□□□ -1.35
PICALM-222ENST00000534375 SOX11P35716 441 aa6.6□□□□□ -1.35
PICALM-222ENST00000534375 KANK4Q5T7N3 995 aaPredicted RBP6.6□□□□□ -1.35
PICALM-222ENST00000534375 ZNF516Q92618 1163 aa6.6□□□□□ -1.35
PICALM-222ENST00000534375 SYMPKQ92797 1274 aaKnown RBP6.6□□□□□ -1.35
PICALM-222ENST00000534375 NOM1Q5C9Z4 860 aaKnown RBP6.59□□□□□ -1.35
PICALM-222ENST00000534375 TXNDC2Q86VQ3 553 aa6.59□□□□□ -1.35
PICALM-222ENST00000534375 IGSF5Q9NSI5 407 aa6.59□□□□□ -1.35
PICALM-222ENST00000534375 SLAIN2Q9P270 581 aa6.59□□□□□ -1.35
PICALM-222ENST00000534375 C6orf229H3BNL8 230 aa6.58□□□□□ -1.36
PICALM-222ENST00000534375 LCE2BO14633 110 aa6.58□□□□□ -1.36
PICALM-222ENST00000534375 SEMA3FQ13275 785 aa6.58□□□□□ -1.36
PICALM-222ENST00000534375 PPP1R18Q6NYC8 613 aa6.58□□□□□ -1.36
PICALM-222ENST00000534375 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.58□□□□□ -1.36
PICALM-222ENST00000534375 SHROOM4Q9ULL8 1493 aa6.58□□□□□ -1.36
PICALM-222ENST00000534375 GGCXP38435 758 aa6.57□□□□□ -1.36
PICALM-222ENST00000534375 COPS2P61201 443 aa6.57□□□□□ -1.36
PICALM-222ENST00000534375 FUT2Q10981 343 aa6.57□□□□□ -1.36
PICALM-222ENST00000534375 ELOAQ14241 798 aaKnown RBP6.57□□□□□ -1.36
PICALM-222ENST00000534375 KMT5BQ4FZB7 885 aa6.57□□□□□ -1.36
PICALM-222ENST00000534375 DNAJC14Q6Y2X3 702 aaPredicted RBP6.57□□□□□ -1.36
PICALM-222ENST00000534375 PCDHB3Q9Y5E6 796 aa6.57□□□□□ -1.36
PICALM-222ENST00000534375 RBM47A0AV96 593 aaKnown RBP6.56□□□□□ -1.36
PICALM-222ENST00000534375 ZPR1O75312 459 aa6.56□□□□□ -1.36
PICALM-222ENST00000534375 KIAA1522Q9P206 1035 aaPredicted RBP6.56□□□□□ -1.36
PICALM-222ENST00000534375 FBXO45P0C2W1 286 aa6.55□□□□□ -1.36
PICALM-222ENST00000534375 LAPTM4AQ15012 233 aa6.55□□□□□ -1.36
PICALM-222ENST00000534375 RSPH4AQ5TD94 716 aa6.55□□□□□ -1.36
PICALM-222ENST00000534375 NKX2-3Q8TAU0 364 aa6.55□□□□□ -1.36
PICALM-222ENST00000534375 FAM174AQ8TBP5 190 aa6.55□□□□□ -1.36
PICALM-222ENST00000534375 PRKD2Q9BZL6 878 aa6.55□□□□□ -1.36
PICALM-222ENST00000534375 NOVA2Q9UNW9 492 aaKnown RBP6.55□□□□□ -1.36
PICALM-222ENST00000534375 USP17L3A6NCW0 530 aa6.54□□□□□ -1.36
PICALM-222ENST00000534375 USP17L4A6NCW7 530 aa6.54□□□□□ -1.36
PICALM-222ENST00000534375 ACTN4O43707 911 aaKnown RBP6.54□□□□□ -1.36
PICALM-222ENST00000534375 USP17L2Q6R6M4 530 aa6.54□□□□□ -1.36
PICALM-222ENST00000534375 USP17L1Q7RTZ2 530 aa6.54□□□□□ -1.36
PICALM-222ENST00000534375 V9GY48 417 aaPredicted RBP6.54□□□□□ -1.36
PICALM-222ENST00000534375 EIF4G2P78344 907 aaKnown RBP eCLIP6.53□□□□□ -1.36
PICALM-222ENST00000534375 FAM69CQ0P6D2 419 aa6.53□□□□□ -1.36
PICALM-222ENST00000534375 NR1H3Q13133 447 aa6.53□□□□□ -1.36
PICALM-222ENST00000534375 CRTC2Q53ET0 693 aaPredicted RBP6.53□□□□□ -1.36
PICALM-222ENST00000534375 B4GALNT3Q6L9W6 998 aa6.53□□□□□ -1.36
PICALM-222ENST00000534375 BLOC1S3Q6QNY0 202 aa6.53□□□□□ -1.36
PICALM-222ENST00000534375 USP17L5A8MUK1 530 aa6.52□□□□□ -1.37
PICALM-222ENST00000534375 CFHP08603 1231 aa6.52□□□□□ -1.37
PICALM-222ENST00000534375 SSFA2P28290 1259 aa6.52□□□□□ -1.37
PICALM-222ENST00000534375 DEPDC4Q8N2C3 294 aa6.52□□□□□ -1.37
PICALM-222ENST00000534375 CCER1Q8TC90 406 aaPredicted RBP6.52□□□□□ -1.37
PICALM-222ENST00000534375 USP17L15C9J2P7 530 aa6.51□□□□□ -1.37
PICALM-222ENST00000534375 USP17L10C9JJH3 530 aa6.51□□□□□ -1.37
PICALM-222ENST00000534375 USP17L13C9JLJ4 530 aa6.51□□□□□ -1.37
PICALM-222ENST00000534375 USP17L12C9JPN9 530 aa6.51□□□□□ -1.37
PICALM-222ENST00000534375 USP17L11C9JVI0 530 aa6.51□□□□□ -1.37
PICALM-222ENST00000534375 USP17L21D6R901 530 aa6.51□□□□□ -1.37
PICALM-222ENST00000534375 USP17L18D6R9N7 530 aa6.51□□□□□ -1.37
PICALM-222ENST00000534375 USP17L22D6RA61 530 aa6.51□□□□□ -1.37
PICALM-222ENST00000534375 USP17L17D6RBQ6 530 aa6.51□□□□□ -1.37
PICALM-222ENST00000534375 USP17L19D6RCP7 530 aa6.51□□□□□ -1.37
PICALM-222ENST00000534375 USP17L20D6RJB6 530 aa6.51□□□□□ -1.37
PICALM-222ENST00000534375 SCNN1AP37088 669 aa6.51□□□□□ -1.37
PICALM-222ENST00000534375 USP17L24Q0WX57 530 aa6.51□□□□□ -1.37
PICALM-222ENST00000534375 PLEKHM2Q8IWE5 1019 aa6.51□□□□□ -1.37
PICALM-222ENST00000534375 NFATC2IPQ8NCF5 419 aa6.51□□□□□ -1.37
PICALM-222ENST00000534375 SOWAHDA6NJG2 315 aa6.5□□□□□ -1.37
PICALM-222ENST00000534375 FAM196BA6NMK8 535 aa6.5□□□□□ -1.37
PICALM-222ENST00000534375 GFRA3O60609 400 aa6.5□□□□□ -1.37
PICALM-222ENST00000534375 NR1I2O75469 434 aa6.5□□□□□ -1.37
PICALM-222ENST00000534375 SKIP12755 728 aa6.5□□□□□ -1.37
PICALM-222ENST00000534375 SERPINB4P48594 390 aa6.5□□□□□ -1.37
PICALM-222ENST00000534375 RETREG3Q86VR2 466 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms