RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 CPLX2Q6PUV4 134 aaKnown RBP14.65□□□□□ -0.06
AMBRA1-212ENST00000534300 LRPPRCP42704 1394 aaKnown RBP14.65□□□□□ -0.06
AMBRA1-212ENST00000534300 KIAA0556O60303 1618 aa14.65□□□□□ -0.06
AMBRA1-212ENST00000534300 KIAA1107Q9UPP5 1409 aa14.65□□□□□ -0.06
AMBRA1-212ENST00000534300 PANK3Q9H999 370 aa14.64□□□□□ -0.07
AMBRA1-212ENST00000534300 RUFY1Q96T51 708 aa14.64□□□□□ -0.07
AMBRA1-212ENST00000534300 USP47Q96K76 1375 aa14.63□□□□□ -0.07
AMBRA1-212ENST00000534300 FBXO31Q5XUX0 539 aaPredicted RBP14.63□□□□□ -0.07
AMBRA1-212ENST00000534300 DZIP1LQ8IYY4 767 aaKnown RBP14.63□□□□□ -0.07
AMBRA1-212ENST00000534300 PATL2C9JE40 543 aaKnown RBP14.63□□□□□ -0.07
AMBRA1-212ENST00000534300 RRP7AQ9Y3A4 280 aaKnown RBP14.63□□□□□ -0.07
AMBRA1-212ENST00000534300 MSH6P52701 1360 aa14.62□□□□□ -0.07
AMBRA1-212ENST00000534300 INTS3Q68E01 1043 aaKnown RBP14.62□□□□□ -0.07
AMBRA1-212ENST00000534300 STRN4Q9NRL3 753 aa14.62□□□□□ -0.07
AMBRA1-212ENST00000534300 A2MP01023 1474 aa14.62□□□□□ -0.07
AMBRA1-212ENST00000534300 HOOK1Q9UJC3 728 aaKnown RBP14.62□□□□□ -0.07
AMBRA1-212ENST00000534300 RTEL1-TNFRSF6BF6WH68 1400 aa14.62□□□□□ -0.07
AMBRA1-212ENST00000534300 APAF1O14727 1248 aa14.61□□□□□ -0.07
AMBRA1-212ENST00000534300 PDE4CQ08493 712 aa14.61□□□□□ -0.07
AMBRA1-212ENST00000534300 RRP12Q5JTH9 1297 aaKnown RBP14.61□□□□□ -0.07
AMBRA1-212ENST00000534300 ERCC4Q92889 916 aaPredicted RBP14.61□□□□□ -0.07
AMBRA1-212ENST00000534300 SMC3Q9UQE7 1217 aa14.61□□□□□ -0.07
AMBRA1-212ENST00000534300 H0YHG0 523 aa14.61□□□□□ -0.07
AMBRA1-212ENST00000534300 LETM1O95202 739 aaPredicted RBP14.61□□□□□ -0.07
AMBRA1-212ENST00000534300 RBM10P98175 930 aaKnown RBP14.61□□□□□ -0.07
AMBRA1-212ENST00000534300 THOC2Q8NI27 1593 aaKnown RBP14.61□□□□□ -0.07
AMBRA1-212ENST00000534300 CABP2Q9NPB3 220 aa14.61□□□□□ -0.07
AMBRA1-212ENST00000534300 CHMP3Q9Y3E7 222 aa14.61□□□□□ -0.07
AMBRA1-212ENST00000534300 MAP3K1Q13233 1512 aa14.6□□□□□ -0.07
AMBRA1-212ENST00000534300 NCBP3Q53F19 620 aaKnown RBP14.6□□□□□ -0.07
AMBRA1-212ENST00000534300 TAF7LQ5H9L4 462 aa14.6□□□□□ -0.07
AMBRA1-212ENST00000534300 PBRM1Q86U86 1689 aa14.6□□□□□ -0.07
AMBRA1-212ENST00000534300 RNF214Q8ND24 703 aa14.6□□□□□ -0.07
AMBRA1-212ENST00000534300 SMG6Q86US8 1419 aaKnown RBP14.6□□□□□ -0.07
AMBRA1-212ENST00000534300 RDXP35241 583 aaKnown RBP14.6□□□□□ -0.07
AMBRA1-212ENST00000534300 CCDC73Q6ZRK6 1079 aa14.6□□□□□ -0.07
AMBRA1-212ENST00000534300 AMOTL2Q9Y2J4 779 aa14.6□□□□□ -0.07
AMBRA1-212ENST00000534300 IDI1Q13907 227 aa14.6□□□□□ -0.07
AMBRA1-212ENST00000534300 NUTM2GQ5VZR2 741 aa14.6□□□□□ -0.07
AMBRA1-212ENST00000534300 UHRF1BP1Q6BDS2 1440 aa14.59□□□□□ -0.07
AMBRA1-212ENST00000534300 ESPNB1AK53 854 aa14.59□□□□□ -0.07
AMBRA1-212ENST00000534300 UHRF1BP1LA0JNW5 1464 aa14.59□□□□□ -0.07
AMBRA1-212ENST00000534300 API5Q9BZZ5 524 aaKnown RBP14.59□□□□□ -0.07
AMBRA1-212ENST00000534300 NUP153P49790 1475 aaKnown RBP14.59□□□□□ -0.07
AMBRA1-212ENST00000534300 VPS37CA5D8V6 355 aaPredicted RBP14.59□□□□□ -0.07
AMBRA1-212ENST00000534300 DIAPH1O60610 1272 aaKnown RBP14.58□□□□□ -0.07
AMBRA1-212ENST00000534300 ANO2Q9NQ90 1003 aa14.58□□□□□ -0.07
AMBRA1-212ENST00000534300 TOMM22Q9NS69 142 aa14.58□□□□□ -0.07
AMBRA1-212ENST00000534300 CAVIN1Q6NZI2 390 aaKnown RBP14.58□□□□□ -0.08
AMBRA1-212ENST00000534300 CCDC191Q8NCU4 936 aa14.58□□□□□ -0.08
AMBRA1-212ENST00000534300 RNF20Q5VTR2 975 aa14.58□□□□□ -0.08
AMBRA1-212ENST00000534300 TOM1L2Q6ZVM7 507 aa14.58□□□□□ -0.08
AMBRA1-212ENST00000534300 NAT10Q9H0A0 1025 aaKnown RBP14.57□□□□□ -0.08
AMBRA1-212ENST00000534300 AKAP17AQ02040 695 aaKnown RBP14.57□□□□□ -0.08
AMBRA1-212ENST00000534300 NGLY1Q96IV0 654 aa14.57□□□□□ -0.08
AMBRA1-212ENST00000534300 CDK19Q9BWU1 502 aa14.57□□□□□ -0.08
AMBRA1-212ENST00000534300 TAF3Q5VWG9 929 aa14.57□□□□□ -0.08
AMBRA1-212ENST00000534300 LEKR1Q6ZMV7 388 aa14.57□□□□□ -0.08
AMBRA1-212ENST00000534300 DCTN1Q14203 1278 aa14.57□□□□□ -0.08
AMBRA1-212ENST00000534300 KLHL34Q8N239 644 aa14.57□□□□□ -0.08
AMBRA1-212ENST00000534300 LRRFIP1Q32MZ4 808 aaKnown RBP14.56□□□□□ -0.08
AMBRA1-212ENST00000534300 GPATCH8Q9UKJ3 1502 aaKnown RBP14.56□□□□□ -0.08
AMBRA1-212ENST00000534300 BACH2Q9BYV9 841 aa14.56□□□□□ -0.08
AMBRA1-212ENST00000534300 KDM5BQ9UGL1 1544 aa14.56□□□□□ -0.08
AMBRA1-212ENST00000534300 ELL2O00472 640 aaPredicted RBP14.56□□□□□ -0.08
AMBRA1-212ENST00000534300 TATP17735 454 aaPredicted RBP14.56□□□□□ -0.08
AMBRA1-212ENST00000534300 CCDC47Q96A33 483 aaKnown RBP14.56□□□□□ -0.08
AMBRA1-212ENST00000534300 NEO1Q92859 1461 aa14.56□□□□□ -0.08
AMBRA1-212ENST00000534300 ABCA5Q8WWZ7 1642 aa14.56□□□□□ -0.08
AMBRA1-212ENST00000534300 HSPA2P54652 639 aa14.56□□□□□ -0.08
AMBRA1-212ENST00000534300 TRIM29Q14134 588 aa14.56□□□□□ -0.08
AMBRA1-212ENST00000534300 GRPEL1Q9HAV7 217 aa14.56□□□□□ -0.08
AMBRA1-212ENST00000534300 MARCH6O60337 910 aa14.55□□□□□ -0.08
AMBRA1-212ENST00000534300 TSPY26PQ9H489 355 aa14.55□□□□□ -0.08
AMBRA1-212ENST00000534300 SYNE3Q6ZMZ3 975 aa14.55□□□□□ -0.08
AMBRA1-212ENST00000534300 KCNH5Q8NCM2 988 aa14.55□□□□□ -0.08
AMBRA1-212ENST00000534300 TRIM5Q9C035 493 aa14.55□□□□□ -0.08
AMBRA1-212ENST00000534300 ATAD2Q6PL18 1390 aa14.55□□□□□ -0.08
AMBRA1-212ENST00000534300 ABCC5O15440 1437 aa14.55□□□□□ -0.08
AMBRA1-212ENST00000534300 CCP110O43303 1012 aa14.55□□□□□ -0.08
AMBRA1-212ENST00000534300 LNPKQ9C0E8 428 aa14.55□□□□□ -0.08
AMBRA1-212ENST00000534300 ATP10AO60312 1499 aa14.55□□□□□ -0.08
AMBRA1-212ENST00000534300 CDC45O75419 566 aa14.54□□□□□ -0.08
AMBRA1-212ENST00000534300 PCMTD1Q96MG8 357 aaPredicted RBP14.54□□□□□ -0.08
AMBRA1-212ENST00000534300 CCDC61Q9Y6R9 512 aa14.54□□□□□ -0.08
AMBRA1-212ENST00000534300 CPLX1O14810 134 aa14.54□□□□□ -0.08
AMBRA1-212ENST00000534300 CTTNBP2Q8WZ74 1663 aa14.54□□□□□ -0.08
AMBRA1-212ENST00000534300 PLEKHO1Q53GL0 409 aaPredicted RBP14.53□□□□□ -0.08
AMBRA1-212ENST00000534300 MCM2P49736 904 aa14.53□□□□□ -0.08
AMBRA1-212ENST00000534300 DHX8Q14562 1220 aaKnown RBP14.52□□□□□ -0.08
AMBRA1-212ENST00000534300 PHF8Q9UPP1 1060 aa14.52□□□□□ -0.08
AMBRA1-212ENST00000534300 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.52□□□□□ -0.09
AMBRA1-212ENST00000534300 UQCRHLA0A096LP55 91 aa14.52□□□□□ -0.09
AMBRA1-212ENST00000534300 UQCRHP07919 91 aa14.52□□□□□ -0.09
AMBRA1-212ENST00000534300 TARBP1Q13395 1621 aaKnown RBP14.52□□□□□ -0.09
AMBRA1-212ENST00000534300 LMTK3Q96Q04 1460 aa14.51□□□□□ -0.09
AMBRA1-212ENST00000534300 CCDC112Q8NEF3 446 aa14.51□□□□□ -0.09
AMBRA1-212ENST00000534300 SDF4Q9BRK5 362 aa14.51□□□□□ -0.09
AMBRA1-212ENST00000534300 PDCL2Q8N4E4 241 aa14.51□□□□□ -0.09
AMBRA1-212ENST00000534300 ZMYM3Q14202 1370 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms