RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 PRR20EP86478 221 aa8.76□□□□□ -1.01
ATPAF1-211ENST00000534216 PRR20CP86479 221 aa8.76□□□□□ -1.01
ATPAF1-211ENST00000534216 PRR20DP86480 221 aa8.76□□□□□ -1.01
ATPAF1-211ENST00000534216 PRR20BP86481 221 aa8.76□□□□□ -1.01
ATPAF1-211ENST00000534216 PRR20AP86496 221 aa8.76□□□□□ -1.01
ATPAF1-211ENST00000534216 NR6A1Q15406 480 aa8.76□□□□□ -1.01
ATPAF1-211ENST00000534216 ZNF511Q8NB15 262 aa8.76□□□□□ -1.01
ATPAF1-211ENST00000534216 PDZRN3Q9UPQ7 1066 aa8.76□□□□□ -1.01
ATPAF1-211ENST00000534216 RC3H1Q5TC82 1133 aaKnown RBP8.75□□□□□ -1.01
ATPAF1-211ENST00000534216 ARMC2Q8NEN0 867 aa8.75□□□□□ -1.01
ATPAF1-211ENST00000534216 EPS8L1Q8TE68 723 aa8.75□□□□□ -1.01
ATPAF1-211ENST00000534216 TNFRSF10AO00220 468 aa8.74□□□□□ -1.01
ATPAF1-211ENST00000534216 TRIM34Q9BYJ4 488 aa8.74□□□□□ -1.01
ATPAF1-211ENST00000534216 GFRA3O60609 400 aa8.73□□□□□ -1.01
ATPAF1-211ENST00000534216 MRGPRX2Q96LB1 330 aa8.73□□□□□ -1.01
ATPAF1-211ENST00000534216 SNRKQ9NRH2 765 aa8.73□□□□□ -1.01
ATPAF1-211ENST00000534216 FKBPLQ9UIM3 349 aa8.73□□□□□ -1.01
ATPAF1-211ENST00000534216 SOCS7O14512 581 aa8.72□□□□□ -1.01
ATPAF1-211ENST00000534216 LAPTM4AQ15012 233 aa8.72□□□□□ -1.01
ATPAF1-211ENST00000534216 NBPF14Q5TI25 921 aa8.72□□□□□ -1.01
ATPAF1-211ENST00000534216 MTMR14Q8NCE2 650 aa8.72□□□□□ -1.01
ATPAF1-211ENST00000534216 GJD4Q96KN9 370 aaPredicted RBP8.72□□□□□ -1.01
ATPAF1-211ENST00000534216 NRG2O14511 850 aaPredicted RBP8.71□□□□□ -1.02
ATPAF1-211ENST00000534216 EHBP1Q8NDI1 1231 aa8.71□□□□□ -1.02
ATPAF1-211ENST00000534216 GPKOWQ92917 476 aaPredicted RBP eCLIP8.71□□□□□ -1.02
ATPAF1-211ENST00000534216 FOXJ1Q92949 421 aa8.71□□□□□ -1.02
ATPAF1-211ENST00000534216 TOR4AQ9NXH8 423 aa8.7□□□□□ -1.02
ATPAF1-211ENST00000534216 ZC3H4Q9UPT8 1303 aaKnown RBP8.7□□□□□ -1.02
ATPAF1-211ENST00000534216 VARSP26640 1264 aaKnown RBP8.69□□□□□ -1.02
ATPAF1-211ENST00000534216 SH3BP5LQ7L8J4 393 aa8.69□□□□□ -1.02
ATPAF1-211ENST00000534216 CYP4X1Q8N118 509 aa8.69□□□□□ -1.02
ATPAF1-211ENST00000534216 PNMA1Q8ND90 353 aa8.69□□□□□ -1.02
ATPAF1-211ENST00000534216 SIAH2O43255 324 aa8.68□□□□□ -1.02
ATPAF1-211ENST00000534216 AGERQ15109 404 aa8.68□□□□□ -1.02
ATPAF1-211ENST00000534216 C4orf48Q5BLP8 95 aa8.68□□□□□ -1.02
ATPAF1-211ENST00000534216 PDXDC2PQ6P474 469 aa8.68□□□□□ -1.02
ATPAF1-211ENST00000534216 SH3RF1Q7Z6J0 888 aa8.68□□□□□ -1.02
ATPAF1-211ENST00000534216 BPHLQ86WA6 291 aaPredicted RBP8.68□□□□□ -1.02
ATPAF1-211ENST00000534216 SNIP1Q8TAD8 396 aaKnown RBP8.68□□□□□ -1.02
ATPAF1-211ENST00000534216 APBB1O00213 710 aa8.67□□□□□ -1.02
ATPAF1-211ENST00000534216 TTC24A2A3L6 582 aaPredicted RBP8.66□□□□□ -1.02
ATPAF1-211ENST00000534216 MCM6Q14566 821 aa8.65□□□□□ -1.02
ATPAF1-211ENST00000534216 FAM174AQ8TBP5 190 aa8.65□□□□□ -1.02
ATPAF1-211ENST00000534216 C1QTNF2Q9BXJ5 285 aa8.65□□□□□ -1.02
ATPAF1-211ENST00000534216 MAGEB6P1A0A0J9YX57 407 aa8.64□□□□□ -1.03
ATPAF1-211ENST00000534216 J3QL48 77 aa8.64□□□□□ -1.03
ATPAF1-211ENST00000534216 GPR37L1O60883 481 aa8.64□□□□□ -1.03
ATPAF1-211ENST00000534216 PTK2Q05397 1052 aa8.64□□□□□ -1.03
ATPAF1-211ENST00000534216 OCSTAMPQ9BR26 566 aa8.64□□□□□ -1.03
ATPAF1-211ENST00000534216 ARHGAP9Q9BRR9 750 aa8.64□□□□□ -1.03
ATPAF1-211ENST00000534216 GPSM3Q9Y4H4 160 aa8.64□□□□□ -1.03
ATPAF1-211ENST00000534216 NDUFB9Q9Y6M9 179 aa8.64□□□□□ -1.03
ATPAF1-211ENST00000534216 FAM187AA6NFU0 413 aa8.63□□□□□ -1.03
ATPAF1-211ENST00000534216 ALDH1A1P00352 501 aa8.63□□□□□ -1.03
ATPAF1-211ENST00000534216 SMPD1P17405 629 aa8.63□□□□□ -1.03
ATPAF1-211ENST00000534216 MPNDQ8N594 471 aa8.63□□□□□ -1.03
ATPAF1-211ENST00000534216 CARD14Q9BXL6 1004 aa8.63□□□□□ -1.03
ATPAF1-211ENST00000534216 TLL2Q9Y6L7 1015 aa8.63□□□□□ -1.03
ATPAF1-211ENST00000534216 DGAT1O75907 488 aa8.62□□□□□ -1.03
ATPAF1-211ENST00000534216 ERFEQ4G0M1 354 aa8.62□□□□□ -1.03
ATPAF1-211ENST00000534216 PKDCCQ504Y2 493 aa8.62□□□□□ -1.03
ATPAF1-211ENST00000534216 TBC1D2BQ9UPU7 963 aa8.62□□□□□ -1.03
ATPAF1-211ENST00000534216 Q6ZNB5 142 aa8.61□□□□□ -1.03
ATPAF1-211ENST00000534216 ZBTB33Q86T24 672 aa8.61□□□□□ -1.03
ATPAF1-211ENST00000534216 TRMT44Q8IYL2 757 aaKnown RBP8.61□□□□□ -1.03
ATPAF1-211ENST00000534216 CDK15Q96Q40 435 aa8.61□□□□□ -1.03
ATPAF1-211ENST00000534216 FLIIQ13045 1269 aa8.6□□□□□ -1.03
ATPAF1-211ENST00000534216 ADAM32Q8TC27 787 aa8.6□□□□□ -1.03
ATPAF1-211ENST00000534216 PRM3Q9NNZ6 103 aa8.6□□□□□ -1.03
ATPAF1-211ENST00000534216 ZBBXA8MT70 800 aa8.59□□□□□ -1.03
ATPAF1-211ENST00000534216 FBXO45P0C2W1 286 aa8.59□□□□□ -1.03
ATPAF1-211ENST00000534216 ARID5BQ14865 1188 aa8.59□□□□□ -1.03
ATPAF1-211ENST00000534216 AVPP01185 164 aa8.58□□□□□ -1.04
ATPAF1-211ENST00000534216 GDPD2Q9HCC8 539 aa8.58□□□□□ -1.04
ATPAF1-211ENST00000534216 MAP4K5Q9Y4K4 846 aa8.58□□□□□ -1.04
ATPAF1-211ENST00000534216 WASF2Q9Y6W5 498 aa8.58□□□□□ -1.04
ATPAF1-211ENST00000534216 LCE2BO14633 110 aa8.57□□□□□ -1.04
ATPAF1-211ENST00000534216 ADH1CP00326 375 aa8.57□□□□□ -1.04
ATPAF1-211ENST00000534216 GRM5P41594 1212 aa8.57□□□□□ -1.04
ATPAF1-211ENST00000534216 HPS1Q92902 700 aa8.57□□□□□ -1.04
ATPAF1-211ENST00000534216 MYT1Q01538 1121 aa8.56□□□□□ -1.04
ATPAF1-211ENST00000534216 NR1H3Q13133 447 aa8.56□□□□□ -1.04
ATPAF1-211ENST00000534216 IRF5Q13568 498 aa8.56□□□□□ -1.04
ATPAF1-211ENST00000534216 TRAF7Q6Q0C0 670 aa8.56□□□□□ -1.04
ATPAF1-211ENST00000534216 VASH1Q7L8A9 365 aaPredicted RBP8.56□□□□□ -1.04
ATPAF1-211ENST00000534216 SLC10A4Q96EP9 437 aa8.56□□□□□ -1.04
ATPAF1-211ENST00000534216 CDV3Q9UKY7 258 aaKnown RBP8.55□□□□□ -1.04
ATPAF1-211ENST00000534216 COG6Q9Y2V7 657 aa8.55□□□□□ -1.04
ATPAF1-211ENST00000534216 ABL2P42684 1182 aa8.54□□□□□ -1.04
ATPAF1-211ENST00000534216 NR5A1Q13285 461 aa8.54□□□□□ -1.04
ATPAF1-211ENST00000534216 NNTQ13423 1086 aa8.54□□□□□ -1.04
ATPAF1-211ENST00000534216 UBTFP17480 764 aaKnown RBP8.53□□□□□ -1.04
ATPAF1-211ENST00000534216 SMCPP49901 116 aaPredicted RBP8.53□□□□□ -1.04
ATPAF1-211ENST00000534216 CTC1Q2NKJ3 1217 aa8.53□□□□□ -1.04
ATPAF1-211ENST00000534216 DZIP3Q86Y13 1208 aaKnown RBP8.53□□□□□ -1.04
ATPAF1-211ENST00000534216 CRIPAKQ8N1N5 446 aa8.53□□□□□ -1.04
ATPAF1-211ENST00000534216 POM121Q96HA1 1249 aa8.53□□□□□ -1.04
ATPAF1-211ENST00000534216 KCTD15Q96SI1 283 aaPredicted RBP8.53□□□□□ -1.04
ATPAF1-211ENST00000534216 NR3C2P08235 984 aa8.52□□□□□ -1.05
ATPAF1-211ENST00000534216 FSHRP23945 695 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms