RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 ACIN1Q9UKV3 1341 aaKnown RBP22.08■■□□□ 1.13
CTSB-230ENST00000534149 RGPD1P0DJD0 1748 aa22.07■■□□□ 1.12
CTSB-230ENST00000534149 EIF3AQ14152 1382 aaKnown RBP22.07■■□□□ 1.12
CTSB-230ENST00000534149 FAM182BQ5T319 152 aa22.06■■□□□ 1.12
CTSB-230ENST00000534149 SPATA31A5Q5VU36 1347 aa22.05■■□□□ 1.12
CTSB-230ENST00000534149 SPATA31A7Q8IWB4 1347 aa22.05■■□□□ 1.12
CTSB-230ENST00000534149 WASLO00401 505 aaPredicted RBP22.04■■□□□ 1.12
CTSB-230ENST00000534149 HRCP23327 699 aa22.04■■□□□ 1.12
CTSB-230ENST00000534149 EN1Q05925 392 aaPredicted RBP22.04■■□□□ 1.12
CTSB-230ENST00000534149 THSD7AQ9UPZ6 1657 aa22.04■■□□□ 1.12
CTSB-230ENST00000534149 PAK3O75914 559 aaPredicted RBP22.03■■□□□ 1.12
CTSB-230ENST00000534149 NGDNQ8NEJ9 315 aaKnown RBP22.03■■□□□ 1.12
CTSB-230ENST00000534149 KDM2AQ9Y2K7 1162 aa22.03■■□□□ 1.12
CTSB-230ENST00000534149 RAB3GAP2Q9H2M9 1393 aa22.02■■□□□ 1.12
CTSB-230ENST00000534149 PRDM11Q9NQV5 511 aa22.02■■□□□ 1.12
CTSB-230ENST00000534149 TNS1Q9HBL0 1735 aaKnown RBP22.01■■□□□ 1.11
CTSB-230ENST00000534149 DCAF11Q8TEB1 546 aa22■■□□□ 1.11
CTSB-230ENST00000534149 ITSN1Q15811 1721 aa22■■□□□ 1.11
CTSB-230ENST00000534149 ARHGEF28Q8N1W1 1705 aaKnown RBP21.99■■□□□ 1.11
CTSB-230ENST00000534149 ATP7BP35670 1465 aa21.98■■□□□ 1.11
CTSB-230ENST00000534149 PHRF1Q9P1Y6 1649 aaKnown RBP21.98■■□□□ 1.11
CTSB-230ENST00000534149 KIAA0232Q92628 1395 aa21.98■■□□□ 1.11
CTSB-230ENST00000534149 DISP2A7MBM2 1401 aa21.97■■□□□ 1.11
CTSB-230ENST00000534149 R3HDM1Q15032 1099 aaKnown RBP21.97■■□□□ 1.11
CTSB-230ENST00000534149 CHRNA2Q15822 529 aa21.96■■□□□ 1.11
CTSB-230ENST00000534149 SPATA31A1Q5TZJ5 1347 aa21.95■■□□□ 1.1
CTSB-230ENST00000534149 EZH2Q15910 746 aaKnown RBP21.94■■□□□ 1.1
CTSB-230ENST00000534149 NUDT16Q96DE0 195 aaKnown RBP21.94■■□□□ 1.1
CTSB-230ENST00000534149 STRN4Q9NRL3 753 aa21.94■■□□□ 1.1
CTSB-230ENST00000534149 NUTM2GQ5VZR2 741 aa21.93■■□□□ 1.1
CTSB-230ENST00000534149 TRIM37O94972 964 aa21.92■■□□□ 1.1
CTSB-230ENST00000534149 ZC3H6P61129 1189 aaKnown RBP21.92■■□□□ 1.1
CTSB-230ENST00000534149 TOPAZ1Q8N9V7 1692 aa21.9■■□□□ 1.1
CTSB-230ENST00000534149 FAM196AQ6ZSG2 479 aa21.89■■□□□ 1.09
CTSB-230ENST00000534149 STAC3Q96MF2 364 aa21.89■■□□□ 1.09
CTSB-230ENST00000534149 CAMKK2Q96RR4 588 aa21.89■■□□□ 1.09
CTSB-230ENST00000534149 USP35Q9P2H5 1018 aa21.89■■□□□ 1.09
CTSB-230ENST00000534149 CDK19Q9BWU1 502 aa21.88■■□□□ 1.09
CTSB-230ENST00000534149 NRKQ7Z2Y5 1582 aa21.87■■□□□ 1.09
CTSB-230ENST00000534149 SSH2Q76I76 1423 aa21.87■■□□□ 1.09
CTSB-230ENST00000534149 POLR3AO14802 1390 aaPredicted RBP21.87■■□□□ 1.09
CTSB-230ENST00000534149 ACEP12821 1306 aa21.86■■□□□ 1.09
CTSB-230ENST00000534149 APBA3O96018 575 aa21.86■■□□□ 1.09
CTSB-230ENST00000534149 EVA1CP58658 441 aa21.85■■□□□ 1.09
CTSB-230ENST00000534149 RREB1Q92766 1687 aa21.85■■□□□ 1.09
CTSB-230ENST00000534149 NBPF8Q3BBV2 869 aa21.84■■□□□ 1.09
CTSB-230ENST00000534149 CAMTA1Q9Y6Y1 1673 aa21.84■■□□□ 1.09
CTSB-230ENST00000534149 LMO7Q8WWI1 1683 aa21.83■■□□□ 1.09
CTSB-230ENST00000534149 BARGINQ6ZT62 677 aa21.83■■□□□ 1.09
CTSB-230ENST00000534149 PARD3Q8TEW0 1356 aa21.83■■□□□ 1.08
CTSB-230ENST00000534149 NUP188Q5SRE5 1749 aa21.83■■□□□ 1.08
CTSB-230ENST00000534149 PDE3BQ13370 1112 aa21.82■■□□□ 1.08
CTSB-230ENST00000534149 LARP1Q6PKG0 1096 aaKnown RBP21.82■■□□□ 1.08
CTSB-230ENST00000534149 CCDC61Q9Y6R9 512 aa21.82■■□□□ 1.08
CTSB-230ENST00000534149 ABTB2Q8N961 1025 aa21.81■■□□□ 1.08
CTSB-230ENST00000534149 PLEKHG3A1L390 1219 aa21.8■■□□□ 1.08
CTSB-230ENST00000534149 USP19O94966 1318 aa21.8■■□□□ 1.08
CTSB-230ENST00000534149 CPDO75976 1380 aa21.79■■□□□ 1.08
CTSB-230ENST00000534149 TCP11L2Q8N4U5 519 aa21.79■■□□□ 1.08
CTSB-230ENST00000534149 KIAA1210Q9ULL0 1709 aa21.79■■□□□ 1.08
CTSB-230ENST00000534149 PARP4Q9UKK3 1724 aaKnown RBP21.76■■□□□ 1.07
CTSB-230ENST00000534149 PPIP5K1Q6PFW1 1433 aa21.75■■□□□ 1.07
CTSB-230ENST00000534149 COL5A2P05997 1499 aaPredicted RBP21.75■■□□□ 1.07
CTSB-230ENST00000534149 GCP02774 474 aa21.74■■□□□ 1.07
CTSB-230ENST00000534149 NBPF1Q3BBV0 1214 aa21.74■■□□□ 1.07
CTSB-230ENST00000534149 NLRP13Q86W25 1043 aa21.74■■□□□ 1.07
CTSB-230ENST00000534149 THRAP3Q9Y2W1 955 aaKnown RBP21.74■■□□□ 1.07
CTSB-230ENST00000534149 SRPK2P78362 688 aaKnown RBP21.73■■□□□ 1.07
CTSB-230ENST00000534149 NBPF14Q5TI25 921 aa21.73■■□□□ 1.07
CTSB-230ENST00000534149 ZBTB7CA1YPR0 619 aa21.71■■□□□ 1.07
CTSB-230ENST00000534149 CABP2Q9NPB3 220 aa21.71■■□□□ 1.07
CTSB-230ENST00000534149 CRB1P82279 1406 aa21.7■■□□□ 1.06
CTSB-230ENST00000534149 PEAK1Q9H792 1746 aa21.69■■□□□ 1.06
CTSB-230ENST00000534149 CENPJQ9HC77 1338 aaPredicted RBP21.69■■□□□ 1.06
CTSB-230ENST00000534149 QRICH2Q9H0J4 1663 aa21.69■■□□□ 1.06
CTSB-230ENST00000534149 OVOS2A0A0G2JMS6 1433 aa21.68■■□□□ 1.06
CTSB-230ENST00000534149 OVOS2A0A0J9YW53 1432 aa21.68■■□□□ 1.06
CTSB-230ENST00000534149 OVOS2Q6IE36 1432 aa21.68■■□□□ 1.06
CTSB-230ENST00000534149 LRRC37A3O60309 1634 aa21.68■■□□□ 1.06
CTSB-230ENST00000534149 SBF2Q86WG5 1849 aa21.67■■□□□ 1.06
CTSB-230ENST00000534149 SLIT3O75094 1523 aa21.66■■□□□ 1.06
CTSB-230ENST00000534149 USP6P35125 1406 aa21.66■■□□□ 1.06
CTSB-230ENST00000534149 BRD4O60885 1362 aaPredicted RBP21.66■■□□□ 1.06
CTSB-230ENST00000534149 NLRP6P59044 892 aa21.66■■□□□ 1.06
CTSB-230ENST00000534149 SPON1Q9HCB6 807 aa21.66■■□□□ 1.06
CTSB-230ENST00000534149 PPP1R1BQ9UD71 204 aaPredicted RBP21.65■■□□□ 1.06
CTSB-230ENST00000534149 RGPD3A6NKT7 1758 aaPredicted RBP21.65■■□□□ 1.06
CTSB-230ENST00000534149 RGPD4Q7Z3J3 1758 aa21.65■■□□□ 1.06
CTSB-230ENST00000534149 AATKQ6ZMQ8 1374 aa21.64■■□□□ 1.06
CTSB-230ENST00000534149 C11orf95C9JLR9 678 aaPredicted RBP21.64■■□□□ 1.05
CTSB-230ENST00000534149 YY1P25490 414 aa21.64■■□□□ 1.05
CTSB-230ENST00000534149 CABP1Q9NZU7 370 aa21.64■■□□□ 1.05
CTSB-230ENST00000534149 WNK3Q9BYP7 1800 aa21.64■■□□□ 1.05
CTSB-230ENST00000534149 COL18A1P39060 1754 aa21.64■■□□□ 1.05
CTSB-230ENST00000534149 PIK3C2AO00443 1686 aa21.63■■□□□ 1.05
CTSB-230ENST00000534149 KCNQ2O43526 872 aa21.63■■□□□ 1.05
CTSB-230ENST00000534149 DDB1Q16531 1140 aa21.62■■□□□ 1.05
CTSB-230ENST00000534149 TOM1L2Q6ZVM7 507 aa21.62■■□□□ 1.05
CTSB-230ENST00000534149 PTF1AQ7RTS3 328 aa21.6■■□□□ 1.05
CTSB-230ENST00000534149 ANO8Q9HCE9 1232 aaPredicted RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms