RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 TRPM3Q9HCF6 1732 aaPredicted RBP31.27■■■□□ 2.6
SSH3-211ENST00000534112 PAK3O75914 559 aaPredicted RBP31.27■■■□□ 2.6
SSH3-211ENST00000534112 BAG6P46379 1132 aa31.23■■■□□ 2.59
SSH3-211ENST00000534112 SPATA31A5Q5VU36 1347 aa31.23■■■□□ 2.59
SSH3-211ENST00000534112 SPATA31A7Q8IWB4 1347 aa31.23■■■□□ 2.59
SSH3-211ENST00000534112 ALS2Q96Q42 1657 aa31.22■■■□□ 2.59
SSH3-211ENST00000534112 NUDT16Q96DE0 195 aaKnown RBP31.21■■■□□ 2.59
SSH3-211ENST00000534112 PRDM11Q9NQV5 511 aa31.21■■■□□ 2.59
SSH3-211ENST00000534112 NRAPQ86VF7 1730 aa31.21■■■□□ 2.59
SSH3-211ENST00000534112 COL14A1Q05707 1796 aaKnown RBP31.2■■■□□ 2.58
SSH3-211ENST00000534112 HRCP23327 699 aa31.18■■■□□ 2.58
SSH3-211ENST00000534112 FAM182BQ5T319 152 aa31.17■■■□□ 2.58
SSH3-211ENST00000534112 CDK19Q9BWU1 502 aa31.14■■■□□ 2.58
SSH3-211ENST00000534112 ATP7BP35670 1465 aa31.14■■■□□ 2.57
SSH3-211ENST00000534112 PSDA5PKW4 1024 aaPredicted RBP31.13■■■□□ 2.57
SSH3-211ENST00000534112 EN1Q05925 392 aaPredicted RBP31.13■■■□□ 2.57
SSH3-211ENST00000534112 KIAA0232Q92628 1395 aa31.13■■■□□ 2.57
SSH3-211ENST00000534112 CHRNA2Q15822 529 aa31.12■■■□□ 2.57
SSH3-211ENST00000534112 SPATA31A1Q5TZJ5 1347 aa31.1■■■□□ 2.57
SSH3-211ENST00000534112 ZC3H6P61129 1189 aaKnown RBP31.09■■■□□ 2.57
SSH3-211ENST00000534112 NUTM2GQ5VZR2 741 aa31.09■■■□□ 2.57
SSH3-211ENST00000534112 NBPF8Q3BBV2 869 aa31.08■■■□□ 2.57
SSH3-211ENST00000534112 STRN4Q9NRL3 753 aa31.08■■■□□ 2.57
SSH3-211ENST00000534112 CCDC61Q9Y6R9 512 aa31.08■■■□□ 2.57
SSH3-211ENST00000534112 CRYBG1Q9Y4K1 1723 aa31.07■■■□□ 2.56
SSH3-211ENST00000534112 ACEP12821 1306 aa31.07■■■□□ 2.56
SSH3-211ENST00000534112 ARHGEF28Q8N1W1 1705 aaKnown RBP31.06■■■□□ 2.56
SSH3-211ENST00000534112 POLR3AO14802 1390 aaPredicted RBP31.05■■■□□ 2.56
SSH3-211ENST00000534112 PLEKHG3A1L390 1219 aa31.05■■■□□ 2.56
SSH3-211ENST00000534112 THSD7AQ9UPZ6 1657 aa31.03■■■□□ 2.56
SSH3-211ENST00000534112 DISP2A7MBM2 1401 aa31.02■■■□□ 2.56
SSH3-211ENST00000534112 FAM196AQ6ZSG2 479 aa31.02■■■□□ 2.56
SSH3-211ENST00000534112 LRP5O75197 1615 aa31.02■■■□□ 2.56
SSH3-211ENST00000534112 ITSN1Q15811 1721 aa31.01■■■□□ 2.56
SSH3-211ENST00000534112 EVA1CP58658 441 aa31.01■■■□□ 2.55
SSH3-211ENST00000534112 R3HDM1Q15032 1099 aaKnown RBP31■■■□□ 2.55
SSH3-211ENST00000534112 ABTB2Q8N961 1025 aa31■■■□□ 2.55
SSH3-211ENST00000534112 USP35Q9P2H5 1018 aa31■■■□□ 2.55
SSH3-211ENST00000534112 TRIM37O94972 964 aa30.99■■■□□ 2.55
SSH3-211ENST00000534112 EZH2Q15910 746 aaKnown RBP30.99■■■□□ 2.55
SSH3-211ENST00000534112 NBPF1Q3BBV0 1214 aa30.99■■■□□ 2.55
SSH3-211ENST00000534112 RGPD1P0DJD0 1748 aa30.98■■■□□ 2.55
SSH3-211ENST00000534112 BARGINQ6ZT62 677 aa30.97■■■□□ 2.55
SSH3-211ENST00000534112 CAMKK2Q96RR4 588 aa30.96■■■□□ 2.55
SSH3-211ENST00000534112 SSH2Q76I76 1423 aa30.95■■■□□ 2.54
SSH3-211ENST00000534112 PHRF1Q9P1Y6 1649 aaKnown RBP30.95■■■□□ 2.54
SSH3-211ENST00000534112 LARP1Q6PKG0 1096 aaKnown RBP30.94■■■□□ 2.54
SSH3-211ENST00000534112 PDE3BQ13370 1112 aa30.93■■■□□ 2.54
SSH3-211ENST00000534112 USP19O94966 1318 aa30.93■■■□□ 2.54
SSH3-211ENST00000534112 CPDO75976 1380 aa30.92■■■□□ 2.54
SSH3-211ENST00000534112 APBA3O96018 575 aa30.92■■■□□ 2.54
SSH3-211ENST00000534112 SRPK2P78362 688 aaKnown RBP30.92■■■□□ 2.54
SSH3-211ENST00000534112 TOPAZ1Q8N9V7 1692 aa30.91■■■□□ 2.54
SSH3-211ENST00000534112 NLRP13Q86W25 1043 aa30.91■■■□□ 2.54
SSH3-211ENST00000534112 TCP11L2Q8N4U5 519 aa30.91■■■□□ 2.54
SSH3-211ENST00000534112 CAMTA1Q9Y6Y1 1673 aa30.9■■■□□ 2.54
SSH3-211ENST00000534112 GCP02774 474 aa30.9■■■□□ 2.54
SSH3-211ENST00000534112 CABP2Q9NPB3 220 aa30.89■■■□□ 2.54
SSH3-211ENST00000534112 TNS1Q9HBL0 1735 aaKnown RBP30.89■■■□□ 2.54
SSH3-211ENST00000534112 CENPJQ9HC77 1338 aaPredicted RBP30.88■■■□□ 2.53
SSH3-211ENST00000534112 PPIP5K1Q6PFW1 1433 aa30.88■■■□□ 2.53
SSH3-211ENST00000534112 KIAA1210Q9ULL0 1709 aa30.87■■■□□ 2.53
SSH3-211ENST00000534112 PARD3Q8TEW0 1356 aa30.86■■■□□ 2.53
SSH3-211ENST00000534112 NRKQ7Z2Y5 1582 aa30.86■■■□□ 2.53
SSH3-211ENST00000534112 THRAP3Q9Y2W1 955 aaKnown RBP30.85■■■□□ 2.53
SSH3-211ENST00000534112 BRD4O60885 1362 aaPredicted RBP30.82■■■□□ 2.52
SSH3-211ENST00000534112 CABP1Q9NZU7 370 aa30.81■■■□□ 2.52
SSH3-211ENST00000534112 LMO7Q8WWI1 1683 aa30.81■■■□□ 2.52
SSH3-211ENST00000534112 NLRP6P59044 892 aa30.79■■■□□ 2.52
SSH3-211ENST00000534112 COL5A2P05997 1499 aaPredicted RBP30.78■■■□□ 2.52
SSH3-211ENST00000534112 ZBTB7CA1YPR0 619 aa30.76■■■□□ 2.51
SSH3-211ENST00000534112 USP6P35125 1406 aa30.75■■■□□ 2.51
SSH3-211ENST00000534112 NBPF14Q5TI25 921 aa30.75■■■□□ 2.51
SSH3-211ENST00000534112 CRB1P82279 1406 aa30.73■■■□□ 2.51
SSH3-211ENST00000534112 C11orf95C9JLR9 678 aaPredicted RBP30.73■■■□□ 2.51
SSH3-211ENST00000534112 L3MBTL2Q969R5 705 aa30.73■■■□□ 2.51
SSH3-211ENST00000534112 AATKQ6ZMQ8 1374 aa30.73■■■□□ 2.51
SSH3-211ENST00000534112 EVC2Q86UK5 1308 aa30.69■■■□□ 2.5
SSH3-211ENST00000534112 TOM1L2Q6ZVM7 507 aa30.68■■■□□ 2.5
SSH3-211ENST00000534112 DDB1Q16531 1140 aa30.66■■■□□ 2.5
SSH3-211ENST00000534112 AXIN2Q9Y2T1 843 aa30.66■■■□□ 2.5
SSH3-211ENST00000534112 SLIT3O75094 1523 aa30.66■■■□□ 2.5
SSH3-211ENST00000534112 QRICH2Q9H0J4 1663 aa30.65■■■□□ 2.5
SSH3-211ENST00000534112 RREB1Q92766 1687 aa30.65■■■□□ 2.5
SSH3-211ENST00000534112 OVOS2A0A0G2JMS6 1433 aa30.64■■■□□ 2.5
SSH3-211ENST00000534112 OVOS2A0A0J9YW53 1432 aa30.64■■■□□ 2.5
SSH3-211ENST00000534112 OVOS2Q6IE36 1432 aa30.64■■■□□ 2.5
SSH3-211ENST00000534112 PARP4Q9UKK3 1724 aaKnown RBP30.64■■■□□ 2.5
SSH3-211ENST00000534112 ZNF692Q9BU19 519 aaPredicted RBP30.63■■■□□ 2.49
SSH3-211ENST00000534112 PLSCR1O15162 318 aa30.62■■■□□ 2.49
SSH3-211ENST00000534112 TTC21BQ7Z4L5 1316 aa30.62■■■□□ 2.49
SSH3-211ENST00000534112 WDR17Q8IZU2 1322 aa30.62■■■□□ 2.49
SSH3-211ENST00000534112 NUP188Q5SRE5 1749 aa30.61■■■□□ 2.49
SSH3-211ENST00000534112 ARHGEF25Q86VW2 580 aa30.61■■■□□ 2.49
SSH3-211ENST00000534112 SIN3AQ96ST3 1273 aa30.6■■■□□ 2.49
SSH3-211ENST00000534112 SPON1Q9HCB6 807 aa30.6■■■□□ 2.49
SSH3-211ENST00000534112 KCNH5Q8NCM2 988 aa30.59■■■□□ 2.49
SSH3-211ENST00000534112 CDCA7Q9BWT1 371 aaPredicted RBP30.58■■■□□ 2.49
SSH3-211ENST00000534112 BCL11BQ9C0K0 894 aaPredicted RBP30.58■■■□□ 2.49
SSH3-211ENST00000534112 KCNQ2O43526 872 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms