RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 NRKQ7Z2Y5 1582 aa28.83■■■□□ 2.21
AP004608.1-202ENST00000533390 RGPD8O14715 1765 aaPredicted RBP28.83■■■□□ 2.21
AP004608.1-202ENST00000533390 NKTRP30414 1462 aaKnown RBP28.83■■■□□ 2.21
AP004608.1-202ENST00000533390 RUNDC1Q96C34 613 aa28.82■■■□□ 2.2
AP004608.1-202ENST00000533390 COG3Q96JB2 828 aa28.82■■■□□ 2.2
AP004608.1-202ENST00000533390 ZNF521Q96K83 1311 aa28.81■■■□□ 2.2
AP004608.1-202ENST00000533390 COL3A1P02461 1466 aaPredicted RBP28.81■■■□□ 2.2
AP004608.1-202ENST00000533390 FMN2Q9NZ56 1722 aa28.8■■■□□ 2.2
AP004608.1-202ENST00000533390 GOLGA2Q08379 1002 aa28.8■■■□□ 2.2
AP004608.1-202ENST00000533390 ANKARQ7Z5J8 1434 aa28.8■■■□□ 2.2
AP004608.1-202ENST00000533390 U2AF1L5P0DN76 240 aaPredicted RBP28.79■■■□□ 2.2
AP004608.1-202ENST00000533390 U2AF1Q01081 240 aaKnown RBP eCLIP28.79■■■□□ 2.2
AP004608.1-202ENST00000533390 RNF123Q5XPI4 1314 aa28.79■■■□□ 2.2
AP004608.1-202ENST00000533390 USP6P35125 1406 aa28.78■■■□□ 2.2
AP004608.1-202ENST00000533390 TTC21BQ7Z4L5 1316 aa28.77■■■□□ 2.2
AP004608.1-202ENST00000533390 NALCNQ8IZF0 1738 aa28.77■■■□□ 2.2
AP004608.1-202ENST00000533390 PNPLA6Q8IY17 1366 aa28.77■■■□□ 2.2
AP004608.1-202ENST00000533390 PELP1Q8IZL8 1130 aaKnown RBP28.76■■■□□ 2.2
AP004608.1-202ENST00000533390 RCAN3Q9UKA8 241 aa28.76■■■□□ 2.2
AP004608.1-202ENST00000533390 AATKQ6ZMQ8 1374 aa28.75■■■□□ 2.19
AP004608.1-202ENST00000533390 DIAPH1O60610 1272 aaKnown RBP28.75■■■□□ 2.19
AP004608.1-202ENST00000533390 POLKQ9UBT6 870 aa28.75■■■□□ 2.19
AP004608.1-202ENST00000533390 U2SURPO15042 1029 aaKnown RBP28.74■■■□□ 2.19
AP004608.1-202ENST00000533390 ZRANB1Q9UGI0 708 aa28.74■■■□□ 2.19
AP004608.1-202ENST00000533390 NGDNQ8NEJ9 315 aaKnown RBP28.73■■■□□ 2.19
AP004608.1-202ENST00000533390 PMFBP1Q8TBY8 1022 aa28.73■■■□□ 2.19
AP004608.1-202ENST00000533390 IQSEC2Q5JU85 1478 aa28.73■■■□□ 2.19
AP004608.1-202ENST00000533390 PPM1GO15355 546 aaPredicted RBP28.72■■■□□ 2.19
AP004608.1-202ENST00000533390 TCP11L2Q8N4U5 519 aa28.71■■■□□ 2.19
AP004608.1-202ENST00000533390 TTC21AQ8NDW8 1320 aa28.7■■■□□ 2.18
AP004608.1-202ENST00000533390 NWD1Q149M9 1564 aa28.69■■■□□ 2.18
AP004608.1-202ENST00000533390 FBLN1P23142 703 aa28.69■■■□□ 2.18
AP004608.1-202ENST00000533390 SLFN5Q08AF3 891 aa28.69■■■□□ 2.18
AP004608.1-202ENST00000533390 CDK12Q9NYV4 1490 aaPredicted RBP28.68■■■□□ 2.18
AP004608.1-202ENST00000533390 DUSP27Q5VZP5 1158 aa28.68■■■□□ 2.18
AP004608.1-202ENST00000533390 ADGRL3Q9HAR2 1447 aa28.68■■■□□ 2.18
AP004608.1-202ENST00000533390 PNNQ9H307 717 aaKnown RBP28.68■■■□□ 2.18
AP004608.1-202ENST00000533390 SSH2Q76I76 1423 aa28.67■■■□□ 2.18
AP004608.1-202ENST00000533390 OVOS2A0A0J9YW53 1432 aa28.66■■■□□ 2.18
AP004608.1-202ENST00000533390 OVOS2Q6IE36 1432 aa28.66■■■□□ 2.18
AP004608.1-202ENST00000533390 E9PSI1 815 aa28.66■■■□□ 2.18
AP004608.1-202ENST00000533390 NCBP3Q53F19 620 aaKnown RBP28.66■■■□□ 2.18
AP004608.1-202ENST00000533390 EMILIN1Q9Y6C2 1016 aa28.66■■■□□ 2.18
AP004608.1-202ENST00000533390 NEUROD2Q15784 382 aa28.66■■■□□ 2.18
AP004608.1-202ENST00000533390 WWC1Q8IX03 1113 aa28.66■■■□□ 2.18
AP004608.1-202ENST00000533390 PPP4R2Q9NY27 417 aa28.66■■■□□ 2.18
AP004608.1-202ENST00000533390 RRP1P56182 461 aaKnown RBP28.65■■■□□ 2.18
AP004608.1-202ENST00000533390 RRP7AQ9Y3A4 280 aaKnown RBP28.63■■■□□ 2.17
AP004608.1-202ENST00000533390 MAPK8IP3Q9UPT6 1336 aa28.63■■■□□ 2.17
AP004608.1-202ENST00000533390 CCDC27Q2M243 656 aa28.63■■■□□ 2.17
AP004608.1-202ENST00000533390 C14orf37Q86TY3 774 aa28.62■■■□□ 2.17
AP004608.1-202ENST00000533390 TRMT2AQ8IZ69 625 aaKnown RBP28.62■■■□□ 2.17
AP004608.1-202ENST00000533390 RBM33Q96EV2 1170 aaKnown RBP28.61■■■□□ 2.17
AP004608.1-202ENST00000533390 RRS1Q15050 365 aaKnown RBP28.61■■■□□ 2.17
AP004608.1-202ENST00000533390 PLEKHF1Q96S99 279 aa28.61■■■□□ 2.17
AP004608.1-202ENST00000533390 FCHSD2O94868 740 aa28.59■■■□□ 2.17
AP004608.1-202ENST00000533390 PHF23Q9BUL5 403 aaPredicted RBP28.59■■■□□ 2.17
AP004608.1-202ENST00000533390 USP31Q70CQ4 1352 aa28.58■■■□□ 2.17
AP004608.1-202ENST00000533390 WDR63Q8IWG1 891 aa28.58■■■□□ 2.17
AP004608.1-202ENST00000533390 SPINK5Q9NQ38 1064 aaPredicted RBP28.57■■■□□ 2.16
AP004608.1-202ENST00000533390 PHF8Q9UPP1 1060 aa28.57■■■□□ 2.16
AP004608.1-202ENST00000533390 NEFMP07197 916 aa28.57■■■□□ 2.16
AP004608.1-202ENST00000533390 PIK3C2AO00443 1686 aa28.56■■■□□ 2.16
AP004608.1-202ENST00000533390 PROSER2Q86WR7 435 aaPredicted RBP28.55■■■□□ 2.16
AP004608.1-202ENST00000533390 LRRC7Q96NW7 1537 aa28.55■■■□□ 2.16
AP004608.1-202ENST00000533390 IL13P35225 146 aa28.55■■■□□ 2.16
AP004608.1-202ENST00000533390 DMRT2Q9Y5R5 561 aa28.55■■■□□ 2.16
AP004608.1-202ENST00000533390 TMPOP42166 694 aaKnown RBP28.53■■■□□ 2.16
AP004608.1-202ENST00000533390 RSPH6AQ9H0K4 717 aa28.51■■■□□ 2.15
AP004608.1-202ENST00000533390 USP54Q70EL1 1684 aa28.5■■■□□ 2.15
AP004608.1-202ENST00000533390 PRKAR2BP31323 418 aa28.5■■■□□ 2.15
AP004608.1-202ENST00000533390 ESCO1Q5FWF5 840 aa28.5■■■□□ 2.15
AP004608.1-202ENST00000533390 NLRP6P59044 892 aa28.49■■■□□ 2.15
AP004608.1-202ENST00000533390 PEAK1Q9H792 1746 aa28.48■■■□□ 2.15
AP004608.1-202ENST00000533390 KDM4FA0A1W2PPD8 638 aa28.47■■■□□ 2.15
AP004608.1-202ENST00000533390 SOX12O15370 315 aa28.47■■■□□ 2.15
AP004608.1-202ENST00000533390 PAK3O75914 559 aaPredicted RBP28.47■■■□□ 2.15
AP004608.1-202ENST00000533390 HMOX1P09601 288 aa28.47■■■□□ 2.15
AP004608.1-202ENST00000533390 HSPA2P54652 639 aa28.47■■■□□ 2.15
AP004608.1-202ENST00000533390 RIPK4P57078 832 aa28.46■■■□□ 2.15
AP004608.1-202ENST00000533390 ABTB2Q8N961 1025 aa28.46■■■□□ 2.15
AP004608.1-202ENST00000533390 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.46■■■□□ 2.15
AP004608.1-202ENST00000533390 MYH16Q9H6N6 1097 aa28.46■■■□□ 2.15
AP004608.1-202ENST00000533390 MARF1Q9Y4F3 1742 aaKnown RBP28.45■■■□□ 2.14
AP004608.1-202ENST00000533390 B4GALNT3Q6L9W6 998 aa28.44■■■□□ 2.14
AP004608.1-202ENST00000533390 STRCP1A6NGW2 1772 aa28.43■■■□□ 2.14
AP004608.1-202ENST00000533390 PSME1Q06323 249 aa28.43■■■□□ 2.14
AP004608.1-202ENST00000533390 C19orf44Q9H6X5 657 aa28.43■■■□□ 2.14
AP004608.1-202ENST00000533390 SBNO1A3KN83 1393 aa28.43■■■□□ 2.14
AP004608.1-202ENST00000533390 MAP3K19Q56UN5 1328 aa28.42■■■□□ 2.14
AP004608.1-202ENST00000533390 PLIN1O60240 522 aa28.42■■■□□ 2.14
AP004608.1-202ENST00000533390 EIF4A2Q14240 407 aaKnown RBP28.42■■■□□ 2.14
AP004608.1-202ENST00000533390 TRIM35Q9UPQ4 493 aa28.42■■■□□ 2.14
AP004608.1-202ENST00000533390 FLT4P35916 1363 aa28.41■■■□□ 2.14
AP004608.1-202ENST00000533390 LMTK3Q96Q04 1460 aa28.4■■■□□ 2.14
AP004608.1-202ENST00000533390 NUTM2GQ5VZR2 741 aa28.4■■■□□ 2.14
AP004608.1-202ENST00000533390 NCOA3Q9Y6Q9 1424 aa28.4■■■□□ 2.14
AP004608.1-202ENST00000533390 KIF1AQ12756 1690 aa28.39■■■□□ 2.14
AP004608.1-202ENST00000533390 AMPHP49418 695 aa28.39■■■□□ 2.14
AP004608.1-202ENST00000533390 HSP90AB2PQ58FF8 381 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms