RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 A0A0G2JS52 829 aa33.25■■■□□ 2.91
PKP3-210ENST00000533249 ONECUT3O60422 494 aaPredicted RBP33.25■■■□□ 2.91
PKP3-210ENST00000533249 MYT1Q01538 1121 aa33.25■■■□□ 2.91
PKP3-210ENST00000533249 NUDT16Q96DE0 195 aaKnown RBP33.25■■■□□ 2.91
PKP3-210ENST00000533249 COL14A1Q05707 1796 aaKnown RBP33.24■■■□□ 2.91
PKP3-210ENST00000533249 KRT27Q7Z3Y8 459 aa33.23■■■□□ 2.91
PKP3-210ENST00000533249 CRYBG1Q9Y4K1 1723 aa33.21■■■□□ 2.91
PKP3-210ENST00000533249 SF3B2Q13435 895 aaKnown RBP33.2■■■□□ 2.91
PKP3-210ENST00000533249 FAM98CQ17RN3 349 aaKnown RBP33.2■■■□□ 2.91
PKP3-210ENST00000533249 DEFB132Q7Z7B7 95 aa33.2■■■□□ 2.91
PKP3-210ENST00000533249 CDK19Q9BWU1 502 aa33.2■■■□□ 2.91
PKP3-210ENST00000533249 KIAA1210Q9ULL0 1709 aa33.18■■■□□ 2.9
PKP3-210ENST00000533249 PRDM11Q9NQV5 511 aa33.17■■■□□ 2.9
PKP3-210ENST00000533249 NBPF1Q3BBV0 1214 aa33.14■■■□□ 2.9
PKP3-210ENST00000533249 NUTM2GQ5VZR2 741 aa33.12■■■□□ 2.89
PKP3-210ENST00000533249 TOPAZ1Q8N9V7 1692 aa33.12■■■□□ 2.89
PKP3-210ENST00000533249 SRCAPQ6ZRS2 3230 aa33.11■■■□□ 2.89
PKP3-210ENST00000533249 ACEP12821 1306 aa33.11■■■□□ 2.89
PKP3-210ENST00000533249 SPATA31A5Q5VU36 1347 aa33.1■■■□□ 2.89
PKP3-210ENST00000533249 SPATA31A7Q8IWB4 1347 aa33.1■■■□□ 2.89
PKP3-210ENST00000533249 CCDC61Q9Y6R9 512 aa33.1■■■□□ 2.89
PKP3-210ENST00000533249 PHRF1Q9P1Y6 1649 aaKnown RBP33.1■■■□□ 2.89
PKP3-210ENST00000533249 KIAA0232Q92628 1395 aa33.09■■■□□ 2.89
PKP3-210ENST00000533249 CHRNA2Q15822 529 aa33.09■■■□□ 2.89
PKP3-210ENST00000533249 POLR3AO14802 1390 aaPredicted RBP33.09■■■□□ 2.89
PKP3-210ENST00000533249 NBPF8Q3BBV2 869 aa33.08■■■□□ 2.89
PKP3-210ENST00000533249 ZC3H6P61129 1189 aaKnown RBP33.07■■■□□ 2.88
PKP3-210ENST00000533249 PLEKHG3A1L390 1219 aa33.04■■■□□ 2.88
PKP3-210ENST00000533249 FAM182BQ5T319 152 aa33.04■■■□□ 2.88
PKP3-210ENST00000533249 STRN4Q9NRL3 753 aa33.04■■■□□ 2.88
PKP3-210ENST00000533249 SRPK2P78362 688 aaKnown RBP33.03■■■□□ 2.88
PKP3-210ENST00000533249 CENPJQ9HC77 1338 aaPredicted RBP33.02■■■□□ 2.88
PKP3-210ENST00000533249 THSD7AQ9UPZ6 1657 aa33.01■■■□□ 2.88
PKP3-210ENST00000533249 BAG6P46379 1132 aa33.01■■■□□ 2.87
PKP3-210ENST00000533249 ABTB2Q8N961 1025 aa33■■■□□ 2.87
PKP3-210ENST00000533249 SPATA31A1Q5TZJ5 1347 aa32.99■■■□□ 2.87
PKP3-210ENST00000533249 PPIP5K1Q6PFW1 1433 aa32.98■■■□□ 2.87
PKP3-210ENST00000533249 CABP2Q9NPB3 220 aa32.98■■■□□ 2.87
PKP3-210ENST00000533249 QRICH2Q9H0J4 1663 aa32.96■■■□□ 2.87
PKP3-210ENST00000533249 NRKQ7Z2Y5 1582 aa32.96■■■□□ 2.87
PKP3-210ENST00000533249 RGPD1P0DJD0 1748 aa32.95■■■□□ 2.87
PKP3-210ENST00000533249 EVA1CP58658 441 aa32.94■■■□□ 2.86
PKP3-210ENST00000533249 L3MBTL2Q969R5 705 aa32.94■■■□□ 2.86
PKP3-210ENST00000533249 USP35Q9P2H5 1018 aa32.94■■■□□ 2.86
PKP3-210ENST00000533249 EN1Q05925 392 aaPredicted RBP32.91■■■□□ 2.86
PKP3-210ENST00000533249 USP19O94966 1318 aa32.91■■■□□ 2.86
PKP3-210ENST00000533249 SSH2Q76I76 1423 aa32.91■■■□□ 2.86
PKP3-210ENST00000533249 NLRP13Q86W25 1043 aa32.9■■■□□ 2.86
PKP3-210ENST00000533249 CAMTA1Q9Y6Y1 1673 aa32.89■■■□□ 2.86
PKP3-210ENST00000533249 PSDA5PKW4 1024 aaPredicted RBP32.89■■■□□ 2.86
PKP3-210ENST00000533249 SIN3AQ96ST3 1273 aa32.88■■■□□ 2.85
PKP3-210ENST00000533249 CPDO75976 1380 aa32.87■■■□□ 2.85
PKP3-210ENST00000533249 CABP1Q9NZU7 370 aa32.87■■■□□ 2.85
PKP3-210ENST00000533249 GCP02774 474 aa32.86■■■□□ 2.85
PKP3-210ENST00000533249 LARP1Q6PKG0 1096 aaKnown RBP32.86■■■□□ 2.85
PKP3-210ENST00000533249 TNS1Q9HBL0 1735 aaKnown RBP32.85■■■□□ 2.85
PKP3-210ENST00000533249 LMO7Q8WWI1 1683 aa32.85■■■□□ 2.85
PKP3-210ENST00000533249 TRPM1Q7Z4N2 1603 aa32.84■■■□□ 2.85
PKP3-210ENST00000533249 NEUROD1Q13562 356 aa32.83■■■□□ 2.85
PKP3-210ENST00000533249 FAM196AQ6ZSG2 479 aa32.83■■■□□ 2.85
PKP3-210ENST00000533249 ZBTB7CA1YPR0 619 aa32.82■■■□□ 2.84
PKP3-210ENST00000533249 TRIM37O94972 964 aa32.82■■■□□ 2.84
PKP3-210ENST00000533249 BARGINQ6ZT62 677 aa32.82■■■□□ 2.84
PKP3-210ENST00000533249 USP6P35125 1406 aa32.82■■■□□ 2.84
PKP3-210ENST00000533249 BRD4O60885 1362 aaPredicted RBP32.82■■■□□ 2.84
PKP3-210ENST00000533249 DISP2A7MBM2 1401 aa32.8■■■□□ 2.84
PKP3-210ENST00000533249 PDE3BQ13370 1112 aa32.8■■■□□ 2.84
PKP3-210ENST00000533249 TCP11L2Q8N4U5 519 aa32.8■■■□□ 2.84
PKP3-210ENST00000533249 EVC2Q86UK5 1308 aa32.79■■■□□ 2.84
PKP3-210ENST00000533249 NLRP6P59044 892 aa32.79■■■□□ 2.84
PKP3-210ENST00000533249 LRP5O75197 1615 aa32.78■■■□□ 2.84
PKP3-210ENST00000533249 EZH2Q15910 746 aaKnown RBP32.78■■■□□ 2.84
PKP3-210ENST00000533249 ROCK2O75116 1388 aaKnown RBP32.77■■■□□ 2.84
PKP3-210ENST00000533249 COL5A2P05997 1499 aaPredicted RBP32.75■■■□□ 2.83
PKP3-210ENST00000533249 R3HDM1Q15032 1099 aaKnown RBP32.74■■■□□ 2.83
PKP3-210ENST00000533249 APBA3O96018 575 aa32.73■■■□□ 2.83
PKP3-210ENST00000533249 SLIT3O75094 1523 aa32.72■■■□□ 2.83
PKP3-210ENST00000533249 CAMKK2Q96RR4 588 aa32.72■■■□□ 2.83
PKP3-210ENST00000533249 THRAP3Q9Y2W1 955 aaKnown RBP32.72■■■□□ 2.83
PKP3-210ENST00000533249 PIK3C2AO00443 1686 aa32.72■■■□□ 2.83
PKP3-210ENST00000533249 CRB1P82279 1406 aa32.69■■■□□ 2.82
PKP3-210ENST00000533249 AATKQ6ZMQ8 1374 aa32.69■■■□□ 2.82
PKP3-210ENST00000533249 PARP4Q9UKK3 1724 aaKnown RBP32.66■■■□□ 2.82
PKP3-210ENST00000533249 TTC21BQ7Z4L5 1316 aa32.65■■■□□ 2.82
PKP3-210ENST00000533249 AKAP12Q02952 1782 aa32.64■■■□□ 2.82
PKP3-210ENST00000533249 PARD3Q8TEW0 1356 aa32.64■■■□□ 2.82
PKP3-210ENST00000533249 ZNF692Q9BU19 519 aaPredicted RBP32.64■■■□□ 2.82
PKP3-210ENST00000533249 SOX12O15370 315 aa32.62■■■□□ 2.81
PKP3-210ENST00000533249 TOM1L2Q6ZVM7 507 aa32.62■■■□□ 2.81
PKP3-210ENST00000533249 COL18A1P39060 1754 aa32.62■■■□□ 2.81
PKP3-210ENST00000533249 AXIN2Q9Y2T1 843 aa32.6■■■□□ 2.81
PKP3-210ENST00000533249 CPSF1Q10570 1443 aaKnown RBP32.6■■■□□ 2.81
PKP3-210ENST00000533249 RREB1Q92766 1687 aa32.59■■■□□ 2.81
PKP3-210ENST00000533249 KTN1Q86UP2 1357 aaKnown RBP32.58■■■□□ 2.81
PKP3-210ENST00000533249 TTC21AQ8NDW8 1320 aa32.57■■■□□ 2.8
PKP3-210ENST00000533249 KCNH5Q8NCM2 988 aa32.57■■■□□ 2.8
PKP3-210ENST00000533249 LRRC37A3O60309 1634 aa32.57■■■□□ 2.8
PKP3-210ENST00000533249 WDR17Q8IZU2 1322 aa32.56■■■□□ 2.8
PKP3-210ENST00000533249 ARHGEF25Q86VW2 580 aa32.56■■■□□ 2.8
PKP3-210ENST00000533249 NUP188Q5SRE5 1749 aa32.56■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms