RNA–Protein interactions for RNA: ENST00000533245.5

SLC43A3-224, Transcript of solute carrier family 43 member 3, humanhuman

TSL 5

Gene SLC43A3, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-224ENST00000533245 PSME1Q06323 249 aa26.78■■□□□ 1.88
SLC43A3-224ENST00000533245 BRD4O60885 1362 aaPredicted RBP26.76■■□□□ 1.87
SLC43A3-224ENST00000533245 TTC21BQ7Z4L5 1316 aa26.76■■□□□ 1.87
SLC43A3-224ENST00000533245 COL16A1Q07092 1604 aaPredicted RBP26.76■■□□□ 1.87
SLC43A3-224ENST00000533245 SBNO1A3KN83 1393 aa26.75■■□□□ 1.87
SLC43A3-224ENST00000533245 PHLPP1O60346 1717 aa26.75■■□□□ 1.87
SLC43A3-224ENST00000533245 ALS2Q96Q42 1657 aa26.73■■□□□ 1.87
SLC43A3-224ENST00000533245 TNS3Q68CZ2 1445 aa26.72■■□□□ 1.87
SLC43A3-224ENST00000533245 PIK3C2AO00443 1686 aa26.71■■□□□ 1.87
SLC43A3-224ENST00000533245 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.71■■□□□ 1.87
SLC43A3-224ENST00000533245 SPATA31A3Q5VYP0 1347 aa26.7■■□□□ 1.87
SLC43A3-224ENST00000533245 TTC21AQ8NDW8 1320 aa26.7■■□□□ 1.87
SLC43A3-224ENST00000533245 AMER1Q5JTC6 1135 aaPredicted RBP26.69■■□□□ 1.86
SLC43A3-224ENST00000533245 NME9Q86XW9 330 aa26.69■■□□□ 1.86
SLC43A3-224ENST00000533245 PAK3O75914 559 aaPredicted RBP26.68■■□□□ 1.86
SLC43A3-224ENST00000533245 FBXO41Q8TF61 875 aa26.67■■□□□ 1.86
SLC43A3-224ENST00000533245 ZRANB1Q9UGI0 708 aa26.67■■□□□ 1.86
SLC43A3-224ENST00000533245 KNSTRNQ9Y448 316 aa26.67■■□□□ 1.86
SLC43A3-224ENST00000533245 KIF20BQ96Q89 1820 aa26.67■■□□□ 1.86
SLC43A3-224ENST00000533245 MARF1Q9Y4F3 1742 aaKnown RBP26.66■■□□□ 1.86
SLC43A3-224ENST00000533245 FYB1O15117 783 aa26.66■■□□□ 1.86
SLC43A3-224ENST00000533245 HSPA1LP34931 641 aa26.66■■□□□ 1.86
SLC43A3-224ENST00000533245 CGNL1Q0VF96 1302 aa26.65■■□□□ 1.86
SLC43A3-224ENST00000533245 USP54Q70EL1 1684 aa26.65■■□□□ 1.86
SLC43A3-224ENST00000533245 USP31Q70CQ4 1352 aa26.64■■□□□ 1.86
SLC43A3-224ENST00000533245 OVOS2A0A0J9YW53 1432 aa26.64■■□□□ 1.85
SLC43A3-224ENST00000533245 OVOS2Q6IE36 1432 aa26.64■■□□□ 1.85
SLC43A3-224ENST00000533245 ABTB2Q8N961 1025 aa26.63■■□□□ 1.85
SLC43A3-224ENST00000533245 LRRC59Q96AG4 307 aaKnown RBP26.63■■□□□ 1.85
SLC43A3-224ENST00000533245 ARHGEF10O15013 1369 aa26.62■■□□□ 1.85
SLC43A3-224ENST00000533245 NPC1L1Q9UHC9 1359 aa26.62■■□□□ 1.85
SLC43A3-224ENST00000533245 NUTM2GQ5VZR2 741 aa26.62■■□□□ 1.85
SLC43A3-224ENST00000533245 GGNBP2Q9H3C7 697 aa26.62■■□□□ 1.85
SLC43A3-224ENST00000533245 MED1Q15648 1581 aaPredicted RBP26.62■■□□□ 1.85
SLC43A3-224ENST00000533245 PNPLA6Q8IY17 1366 aa26.61■■□□□ 1.85
SLC43A3-224ENST00000533245 NSD2O96028 1365 aa26.6■■□□□ 1.85
SLC43A3-224ENST00000533245 LMOD2Q6P5Q4 547 aa26.6■■□□□ 1.85
SLC43A3-224ENST00000533245 ANKRD26Q9UPS8 1709 aa26.59■■□□□ 1.85
SLC43A3-224ENST00000533245 USP19O94966 1318 aa26.59■■□□□ 1.85
SLC43A3-224ENST00000533245 CRYBG1Q9Y4K1 1723 aa26.59■■□□□ 1.85
SLC43A3-224ENST00000533245 COL22A1Q8NFW1 1626 aaPredicted RBP26.58■■□□□ 1.85
SLC43A3-224ENST00000533245 NLRP6P59044 892 aa26.58■■□□□ 1.85
SLC43A3-224ENST00000533245 SLIT3O75094 1523 aa26.57■■□□□ 1.84
SLC43A3-224ENST00000533245 CC2D1BQ5T0F9 858 aaKnown RBP26.57■■□□□ 1.84
SLC43A3-224ENST00000533245 SHPRHQ149N8 1683 aa26.56■■□□□ 1.84
SLC43A3-224ENST00000533245 NLRP13Q86W25 1043 aa26.55■■□□□ 1.84
SLC43A3-224ENST00000533245 PHRF1Q9P1Y6 1649 aaKnown RBP26.54■■□□□ 1.84
SLC43A3-224ENST00000533245 ABCA3Q99758 1704 aa26.54■■□□□ 1.84
SLC43A3-224ENST00000533245 COG3Q96JB2 828 aa26.54■■□□□ 1.84
SLC43A3-224ENST00000533245 JCADQ9P266 1359 aa26.54■■□□□ 1.84
SLC43A3-224ENST00000533245 CNGB1Q14028 1251 aaPredicted RBP26.52■■□□□ 1.84
SLC43A3-224ENST00000533245 CABLES1Q8TDN4 633 aa26.52■■□□□ 1.84
SLC43A3-224ENST00000533245 NFAT5O94916 1531 aa26.51■■□□□ 1.83
SLC43A3-224ENST00000533245 PARD3Q8TEW0 1356 aa26.5■■□□□ 1.83
SLC43A3-224ENST00000533245 PLEKHG5O94827 1062 aa26.5■■□□□ 1.83
SLC43A3-224ENST00000533245 MORC1Q86VD1 984 aa26.48■■□□□ 1.83
SLC43A3-224ENST00000533245 FBLN1P23142 703 aa26.47■■□□□ 1.83
SLC43A3-224ENST00000533245 GCP02774 474 aa26.46■■□□□ 1.83
SLC43A3-224ENST00000533245 DIEXFQ68CQ4 756 aaKnown RBP26.45■■□□□ 1.82
SLC43A3-224ENST00000533245 SOX12O15370 315 aa26.44■■□□□ 1.82
SLC43A3-224ENST00000533245 PRKRIP1Q9H875 184 aaPredicted RBP26.44■■□□□ 1.82
SLC43A3-224ENST00000533245 AATKQ6ZMQ8 1374 aa26.44■■□□□ 1.82
SLC43A3-224ENST00000533245 TNNT2P45379 298 aaPredicted RBP26.43■■□□□ 1.82
SLC43A3-224ENST00000533245 KCNH5Q8NCM2 988 aa26.42■■□□□ 1.82
SLC43A3-224ENST00000533245 LRP6O75581 1613 aa26.41■■□□□ 1.82
SLC43A3-224ENST00000533245 SPATA31A6Q5VVP1 1343 aa26.4■■□□□ 1.82
SLC43A3-224ENST00000533245 RALBP1Q15311 655 aa26.4■■□□□ 1.82
SLC43A3-224ENST00000533245 RRS1Q15050 365 aaKnown RBP26.39■■□□□ 1.82
SLC43A3-224ENST00000533245 CPDO75976 1380 aa26.38■■□□□ 1.81
SLC43A3-224ENST00000533245 ZC3H6P61129 1189 aaKnown RBP26.38■■□□□ 1.81
SLC43A3-224ENST00000533245 ARHGEF25Q86VW2 580 aa26.38■■□□□ 1.81
SLC43A3-224ENST00000533245 SMG6Q86US8 1419 aaKnown RBP26.38■■□□□ 1.81
SLC43A3-224ENST00000533245 MAP3K19Q56UN5 1328 aa26.38■■□□□ 1.81
SLC43A3-224ENST00000533245 PEAK1Q9H792 1746 aa26.37■■□□□ 1.81
SLC43A3-224ENST00000533245 KIAA0232Q92628 1395 aa26.37■■□□□ 1.81
SLC43A3-224ENST00000533245 NUTM2BA6NNL0 878 aaPredicted RBP26.37■■□□□ 1.81
SLC43A3-224ENST00000533245 NUTM2EB1AL46 878 aaPredicted RBP26.37■■□□□ 1.81
SLC43A3-224ENST00000533245 ANP32CO43423 234 aa26.37■■□□□ 1.81
SLC43A3-224ENST00000533245 PPP2R1AP30153 589 aa26.37■■□□□ 1.81
SLC43A3-224ENST00000533245 NUTM2AQ8IVF1 878 aaPredicted RBP26.37■■□□□ 1.81
SLC43A3-224ENST00000533245 POLKQ9UBT6 870 aa26.37■■□□□ 1.81
SLC43A3-224ENST00000533245 HAP1P54257 671 aaPredicted RBP26.36■■□□□ 1.81
SLC43A3-224ENST00000533245 EMILIN1Q9Y6C2 1016 aa26.36■■□□□ 1.81
SLC43A3-224ENST00000533245 MAP2P11137 1827 aaKnown RBP26.36■■□□□ 1.81
SLC43A3-224ENST00000533245 LTN1O94822 1766 aa26.35■■□□□ 1.81
SLC43A3-224ENST00000533245 ILDR1Q86SU0 546 aaPredicted RBP26.35■■□□□ 1.81
SLC43A3-224ENST00000533245 COL18A1P39060 1754 aa26.33■■□□□ 1.81
SLC43A3-224ENST00000533245 MYBBP1AQ9BQG0 1328 aaKnown RBP26.33■■□□□ 1.81
SLC43A3-224ENST00000533245 ADAMTS2O95450 1211 aa26.32■■□□□ 1.8
SLC43A3-224ENST00000533245 LMO7Q8WWI1 1683 aa26.31■■□□□ 1.8
SLC43A3-224ENST00000533245 ZBTB7CA1YPR0 619 aa26.3■■□□□ 1.8
SLC43A3-224ENST00000533245 MTHFSP49914 203 aa26.3■■□□□ 1.8
SLC43A3-224ENST00000533245 CHRNA2Q15822 529 aa26.3■■□□□ 1.8
SLC43A3-224ENST00000533245 RTL1A6NKG5 1358 aa26.3■■□□□ 1.8
SLC43A3-224ENST00000533245 ABCC6O95255 1503 aa26.29■■□□□ 1.8
SLC43A3-224ENST00000533245 FAM83GA6ND36 823 aa26.29■■□□□ 1.8
SLC43A3-224ENST00000533245 PRDM11Q9NQV5 511 aa26.29■■□□□ 1.8
SLC43A3-224ENST00000533245 CDK12Q9NYV4 1490 aaPredicted RBP26.29■■□□□ 1.8
SLC43A3-224ENST00000533245 HOXC9P31274 260 aa26.28■■□□□ 1.8
SLC43A3-224ENST00000533245 KIF24Q5T7B8 1368 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms