RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 TOPAZ1Q8N9V7 1692 aa24.88■■□□□ 1.57
RPUSD4-207ENST00000532800 BLMP54132 1417 aaPredicted RBP24.88■■□□□ 1.57
RPUSD4-207ENST00000532800 PAK3O75914 559 aaPredicted RBP24.88■■□□□ 1.57
RPUSD4-207ENST00000532800 NUDT16Q96DE0 195 aaKnown RBP24.88■■□□□ 1.57
RPUSD4-207ENST00000532800 BTG4Q9NY30 223 aa24.88■■□□□ 1.57
RPUSD4-207ENST00000532800 ONECUT3O60422 494 aaPredicted RBP24.87■■□□□ 1.57
RPUSD4-207ENST00000532800 CDK19Q9BWU1 502 aa24.85■■□□□ 1.57
RPUSD4-207ENST00000532800 ZRANB1Q9UGI0 708 aa24.85■■□□□ 1.57
RPUSD4-207ENST00000532800 PHRF1Q9P1Y6 1649 aaKnown RBP24.85■■□□□ 1.57
RPUSD4-207ENST00000532800 NBPF1Q3BBV0 1214 aa24.84■■□□□ 1.57
RPUSD4-207ENST00000532800 KRT27Q7Z3Y8 459 aa24.83■■□□□ 1.57
RPUSD4-207ENST00000532800 A0A0G2JS52 829 aa24.82■■□□□ 1.56
RPUSD4-207ENST00000532800 MYT1Q01538 1121 aa24.82■■□□□ 1.56
RPUSD4-207ENST00000532800 FAM98CQ17RN3 349 aaKnown RBP24.82■■□□□ 1.56
RPUSD4-207ENST00000532800 DEFB132Q7Z7B7 95 aa24.82■■□□□ 1.56
RPUSD4-207ENST00000532800 POLR3AO14802 1390 aaPredicted RBP24.8■■□□□ 1.56
RPUSD4-207ENST00000532800 PRDM11Q9NQV5 511 aa24.79■■□□□ 1.56
RPUSD4-207ENST00000532800 KIAA0232Q92628 1395 aa24.79■■□□□ 1.56
RPUSD4-207ENST00000532800 NUTM2GQ5VZR2 741 aa24.78■■□□□ 1.56
RPUSD4-207ENST00000532800 ACEP12821 1306 aa24.78■■□□□ 1.56
RPUSD4-207ENST00000532800 CCDC61Q9Y6R9 512 aa24.77■■□□□ 1.56
RPUSD4-207ENST00000532800 THSD7AQ9UPZ6 1657 aa24.77■■□□□ 1.56
RPUSD4-207ENST00000532800 SPATA31A5Q5VU36 1347 aa24.77■■□□□ 1.56
RPUSD4-207ENST00000532800 SPATA31A7Q8IWB4 1347 aa24.77■■□□□ 1.56
RPUSD4-207ENST00000532800 SF3B2Q13435 895 aaKnown RBP24.76■■□□□ 1.55
RPUSD4-207ENST00000532800 QRICH2Q9H0J4 1663 aa24.75■■□□□ 1.55
RPUSD4-207ENST00000532800 CHRNA2Q15822 529 aa24.75■■□□□ 1.55
RPUSD4-207ENST00000532800 NBPF8Q3BBV2 869 aa24.75■■□□□ 1.55
RPUSD4-207ENST00000532800 PLEKHG3A1L390 1219 aa24.74■■□□□ 1.55
RPUSD4-207ENST00000532800 NRKQ7Z2Y5 1582 aa24.74■■□□□ 1.55
RPUSD4-207ENST00000532800 ZC3H6P61129 1189 aaKnown RBP24.73■■□□□ 1.55
RPUSD4-207ENST00000532800 CENPJQ9HC77 1338 aaPredicted RBP24.72■■□□□ 1.55
RPUSD4-207ENST00000532800 FAM182BQ5T319 152 aa24.72■■□□□ 1.55
RPUSD4-207ENST00000532800 PPIP5K1Q6PFW1 1433 aa24.71■■□□□ 1.55
RPUSD4-207ENST00000532800 SRPK2P78362 688 aaKnown RBP24.7■■□□□ 1.54
RPUSD4-207ENST00000532800 STRN4Q9NRL3 753 aa24.7■■□□□ 1.54
RPUSD4-207ENST00000532800 SPATA31A1Q5TZJ5 1347 aa24.69■■□□□ 1.54
RPUSD4-207ENST00000532800 CABP2Q9NPB3 220 aa24.69■■□□□ 1.54
RPUSD4-207ENST00000532800 RGPD1P0DJD0 1748 aa24.69■■□□□ 1.54
RPUSD4-207ENST00000532800 ABTB2Q8N961 1025 aa24.68■■□□□ 1.54
RPUSD4-207ENST00000532800 L3MBTL2Q969R5 705 aa24.68■■□□□ 1.54
RPUSD4-207ENST00000532800 TRPM1Q7Z4N2 1603 aa24.67■■□□□ 1.54
RPUSD4-207ENST00000532800 USP19O94966 1318 aa24.66■■□□□ 1.54
RPUSD4-207ENST00000532800 LMO7Q8WWI1 1683 aa24.66■■□□□ 1.54
RPUSD4-207ENST00000532800 TNS1Q9HBL0 1735 aaKnown RBP24.66■■□□□ 1.54
RPUSD4-207ENST00000532800 BAG6P46379 1132 aa24.65■■□□□ 1.54
RPUSD4-207ENST00000532800 SIN3AQ96ST3 1273 aa24.65■■□□□ 1.54
RPUSD4-207ENST00000532800 CAMTA1Q9Y6Y1 1673 aa24.65■■□□□ 1.54
RPUSD4-207ENST00000532800 SSH2Q76I76 1423 aa24.64■■□□□ 1.54
RPUSD4-207ENST00000532800 USP35Q9P2H5 1018 aa24.62■■□□□ 1.53
RPUSD4-207ENST00000532800 CPDO75976 1380 aa24.62■■□□□ 1.53
RPUSD4-207ENST00000532800 EN1Q05925 392 aaPredicted RBP24.6■■□□□ 1.53
RPUSD4-207ENST00000532800 CABP1Q9NZU7 370 aa24.6■■□□□ 1.53
RPUSD4-207ENST00000532800 USP6P35125 1406 aa24.6■■□□□ 1.53
RPUSD4-207ENST00000532800 EVA1CP58658 441 aa24.59■■□□□ 1.53
RPUSD4-207ENST00000532800 LARP1Q6PKG0 1096 aaKnown RBP24.59■■□□□ 1.53
RPUSD4-207ENST00000532800 NLRP13Q86W25 1043 aa24.59■■□□□ 1.53
RPUSD4-207ENST00000532800 PSDA5PKW4 1024 aaPredicted RBP24.58■■□□□ 1.53
RPUSD4-207ENST00000532800 GCP02774 474 aa24.58■■□□□ 1.53
RPUSD4-207ENST00000532800 NEUROD1Q13562 356 aa24.58■■□□□ 1.53
RPUSD4-207ENST00000532800 DISP2A7MBM2 1401 aa24.57■■□□□ 1.52
RPUSD4-207ENST00000532800 PIK3C2AO00443 1686 aa24.56■■□□□ 1.52
RPUSD4-207ENST00000532800 BRD4O60885 1362 aaPredicted RBP24.56■■□□□ 1.52
RPUSD4-207ENST00000532800 LRP5O75197 1615 aa24.56■■□□□ 1.52
RPUSD4-207ENST00000532800 COL5A2P05997 1499 aaPredicted RBP24.56■■□□□ 1.52
RPUSD4-207ENST00000532800 SLIT3O75094 1523 aa24.56■■□□□ 1.52
RPUSD4-207ENST00000532800 ROCK2O75116 1388 aaKnown RBP24.55■■□□□ 1.52
RPUSD4-207ENST00000532800 BARGINQ6ZT62 677 aa24.55■■□□□ 1.52
RPUSD4-207ENST00000532800 EVC2Q86UK5 1308 aa24.54■■□□□ 1.52
RPUSD4-207ENST00000532800 TRIM37O94972 964 aa24.53■■□□□ 1.52
RPUSD4-207ENST00000532800 ZBTB7CA1YPR0 619 aa24.52■■□□□ 1.52
RPUSD4-207ENST00000532800 NLRP6P59044 892 aa24.52■■□□□ 1.52
RPUSD4-207ENST00000532800 FAM196AQ6ZSG2 479 aa24.52■■□□□ 1.52
RPUSD4-207ENST00000532800 TCP11L2Q8N4U5 519 aa24.52■■□□□ 1.52
RPUSD4-207ENST00000532800 AKAP12Q02952 1782 aa24.52■■□□□ 1.52
RPUSD4-207ENST00000532800 EZH2Q15910 746 aaKnown RBP24.51■■□□□ 1.51
RPUSD4-207ENST00000532800 PARP4Q9UKK3 1724 aaKnown RBP24.5■■□□□ 1.51
RPUSD4-207ENST00000532800 PDE3BQ13370 1112 aa24.49■■□□□ 1.51
RPUSD4-207ENST00000532800 COL18A1P39060 1754 aa24.49■■□□□ 1.51
RPUSD4-207ENST00000532800 CRB1P82279 1406 aa24.47■■□□□ 1.51
RPUSD4-207ENST00000532800 AATKQ6ZMQ8 1374 aa24.47■■□□□ 1.51
RPUSD4-207ENST00000532800 CAMKK2Q96RR4 588 aa24.47■■□□□ 1.51
RPUSD4-207ENST00000532800 THRAP3Q9Y2W1 955 aaKnown RBP24.47■■□□□ 1.51
RPUSD4-207ENST00000532800 R3HDM1Q15032 1099 aaKnown RBP24.46■■□□□ 1.51
RPUSD4-207ENST00000532800 APBA3O96018 575 aa24.45■■□□□ 1.5
RPUSD4-207ENST00000532800 RREB1Q92766 1687 aa24.45■■□□□ 1.5
RPUSD4-207ENST00000532800 TTC21BQ7Z4L5 1316 aa24.44■■□□□ 1.5
RPUSD4-207ENST00000532800 LRRC37A3O60309 1634 aa24.44■■□□□ 1.5
RPUSD4-207ENST00000532800 WNK3Q9BYP7 1800 aa24.43■■□□□ 1.5
RPUSD4-207ENST00000532800 RGPD5Q99666 1765 aa24.43■■□□□ 1.5
RPUSD4-207ENST00000532800 NUP188Q5SRE5 1749 aa24.43■■□□□ 1.5
RPUSD4-207ENST00000532800 CPSF1Q10570 1443 aaKnown RBP24.43■■□□□ 1.5
RPUSD4-207ENST00000532800 MON2Q7Z3U7 1717 aa24.41■■□□□ 1.5
RPUSD4-207ENST00000532800 PEAK1Q9H792 1746 aa24.41■■□□□ 1.5
RPUSD4-207ENST00000532800 AXIN2Q9Y2T1 843 aa24.41■■□□□ 1.5
RPUSD4-207ENST00000532800 PARD3Q8TEW0 1356 aa24.41■■□□□ 1.5
RPUSD4-207ENST00000532800 SOX12O15370 315 aa24.4■■□□□ 1.5
RPUSD4-207ENST00000532800 ZNF692Q9BU19 519 aaPredicted RBP24.4■■□□□ 1.5
RPUSD4-207ENST00000532800 TOM1L2Q6ZVM7 507 aa24.39■■□□□ 1.49
RPUSD4-207ENST00000532800 NFAT5O94916 1531 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms