RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 HAP1P54257 671 aaPredicted RBP27.31■■□□□ 1.96
SSH3-209ENST00000532600 POLR3AO14802 1390 aaPredicted RBP27.31■■□□□ 1.96
SSH3-209ENST00000532600 ACEP12821 1306 aa27.28■■□□□ 1.96
SSH3-209ENST00000532600 PLEKHG3A1L390 1219 aa27.28■■□□□ 1.96
SSH3-209ENST00000532600 CCDC61Q9Y6R9 512 aa27.28■■□□□ 1.96
SSH3-209ENST00000532600 NRAPQ86VF7 1730 aa27.27■■□□□ 1.96
SSH3-209ENST00000532600 NBPF8Q3BBV2 869 aa27.27■■□□□ 1.96
SSH3-209ENST00000532600 PAK3O75914 559 aaPredicted RBP27.26■■□□□ 1.95
SSH3-209ENST00000532600 PCGF6Q9BYE7 350 aa27.25■■□□□ 1.95
SSH3-209ENST00000532600 VPS72Q15906 364 aa27.24■■□□□ 1.95
SSH3-209ENST00000532600 CABP2Q9NPB3 220 aa27.24■■□□□ 1.95
SSH3-209ENST00000532600 ATAD2Q6PL18 1390 aa27.23■■□□□ 1.95
SSH3-209ENST00000532600 COL14A1Q05707 1796 aaKnown RBP27.23■■□□□ 1.95
SSH3-209ENST00000532600 PHRF1Q9P1Y6 1649 aaKnown RBP27.23■■□□□ 1.95
SSH3-209ENST00000532600 PPIP5K1Q6PFW1 1433 aa27.22■■□□□ 1.95
SSH3-209ENST00000532600 ROCK2O75116 1388 aaKnown RBP27.22■■□□□ 1.95
SSH3-209ENST00000532600 BRWD3Q6RI45 1802 aa27.21■■□□□ 1.95
SSH3-209ENST00000532600 SRPK2P78362 688 aaKnown RBP27.21■■□□□ 1.95
SSH3-209ENST00000532600 NUTM2GQ5VZR2 741 aa27.19■■□□□ 1.94
SSH3-209ENST00000532600 EP400Q96L91 3159 aa27.19■■□□□ 1.94
SSH3-209ENST00000532600 BTG4Q9NY30 223 aa27.18■■□□□ 1.94
SSH3-209ENST00000532600 ONECUT3O60422 494 aaPredicted RBP27.16■■□□□ 1.94
SSH3-209ENST00000532600 KIAA0232Q92628 1395 aa27.14■■□□□ 1.94
SSH3-209ENST00000532600 SEPT12Q8IYM1 358 aa27.14■■□□□ 1.94
SSH3-209ENST00000532600 NRKQ7Z2Y5 1582 aa27.14■■□□□ 1.93
SSH3-209ENST00000532600 CABP1Q9NZU7 370 aa27.13■■□□□ 1.93
SSH3-209ENST00000532600 CCDC9Q9Y3X0 531 aaKnown RBP27.12■■□□□ 1.93
SSH3-209ENST00000532600 PRDM11Q9NQV5 511 aa27.11■■□□□ 1.93
SSH3-209ENST00000532600 USP19O94966 1318 aa27.11■■□□□ 1.93
SSH3-209ENST00000532600 CHRNA2Q15822 529 aa27.1■■□□□ 1.93
SSH3-209ENST00000532600 EVC2Q86UK5 1308 aa27.1■■□□□ 1.93
SSH3-209ENST00000532600 USP6P35125 1406 aa27.09■■□□□ 1.93
SSH3-209ENST00000532600 SSH2Q76I76 1423 aa27.09■■□□□ 1.93
SSH3-209ENST00000532600 ABTB2Q8N961 1025 aa27.09■■□□□ 1.93
SSH3-209ENST00000532600 ZC3H6P61129 1189 aaKnown RBP27.08■■□□□ 1.93
SSH3-209ENST00000532600 SPATA31A5Q5VU36 1347 aa27.07■■□□□ 1.92
SSH3-209ENST00000532600 SPATA31A7Q8IWB4 1347 aa27.07■■□□□ 1.92
SSH3-209ENST00000532600 TONSLQ96HA7 1378 aa27.07■■□□□ 1.92
SSH3-209ENST00000532600 LMO7Q8WWI1 1683 aa27.05■■□□□ 1.92
SSH3-209ENST00000532600 FAM98CQ17RN3 349 aaKnown RBP27.05■■□□□ 1.92
SSH3-209ENST00000532600 BRD4O60885 1362 aaPredicted RBP27.05■■□□□ 1.92
SSH3-209ENST00000532600 PIK3C2AO00443 1686 aa27.04■■□□□ 1.92
SSH3-209ENST00000532600 THSD7AQ9UPZ6 1657 aa27.04■■□□□ 1.92
SSH3-209ENST00000532600 AKAP12Q02952 1782 aa27.04■■□□□ 1.92
SSH3-209ENST00000532600 CPDO75976 1380 aa27.03■■□□□ 1.92
SSH3-209ENST00000532600 CARD11Q9BXL7 1154 aa27.03■■□□□ 1.92
SSH3-209ENST00000532600 SBNO2Q9Y2G9 1366 aa27.03■■□□□ 1.92
SSH3-209ENST00000532600 CAMTA1Q9Y6Y1 1673 aa27.03■■□□□ 1.92
SSH3-209ENST00000532600 SLIT3O75094 1523 aa27■■□□□ 1.91
SSH3-209ENST00000532600 GCP02774 474 aa27■■□□□ 1.91
SSH3-209ENST00000532600 KRT27Q7Z3Y8 459 aa27■■□□□ 1.91
SSH3-209ENST00000532600 NLRP13Q86W25 1043 aa27■■□□□ 1.91
SSH3-209ENST00000532600 CCDC125Q86Z20 511 aa27■■□□□ 1.91
SSH3-209ENST00000532600 SPATA31A1Q5TZJ5 1347 aa26.99■■□□□ 1.91
SSH3-209ENST00000532600 BLMP54132 1417 aaPredicted RBP26.99■■□□□ 1.91
SSH3-209ENST00000532600 CPSF1Q10570 1443 aaKnown RBP26.99■■□□□ 1.91
SSH3-209ENST00000532600 STRN4Q9NRL3 753 aa26.97■■□□□ 1.91
SSH3-209ENST00000532600 A0A0G2JS52 829 aa26.95■■□□□ 1.9
SSH3-209ENST00000532600 NLRP6P59044 892 aa26.95■■□□□ 1.9
SSH3-209ENST00000532600 MYT1Q01538 1121 aa26.95■■□□□ 1.9
SSH3-209ENST00000532600 CD163L1Q9NR16 1453 aa26.94■■□□□ 1.9
SSH3-209ENST00000532600 TTC21BQ7Z4L5 1316 aa26.94■■□□□ 1.9
SSH3-209ENST00000532600 MON2Q7Z3U7 1717 aa26.93■■□□□ 1.9
SSH3-209ENST00000532600 LARP1Q6PKG0 1096 aaKnown RBP26.93■■□□□ 1.9
SSH3-209ENST00000532600 COL18A1P39060 1754 aa26.92■■□□□ 1.9
SSH3-209ENST00000532600 FAM182BQ5T319 152 aa26.92■■□□□ 1.9
SSH3-209ENST00000532600 DEFB132Q7Z7B7 95 aa26.92■■□□□ 1.9
SSH3-209ENST00000532600 ZNF692Q9BU19 519 aaPredicted RBP26.92■■□□□ 1.9
SSH3-209ENST00000532600 COL5A2P05997 1499 aaPredicted RBP26.91■■□□□ 1.9
SSH3-209ENST00000532600 KTN1Q86UP2 1357 aaKnown RBP26.89■■□□□ 1.9
SSH3-209ENST00000532600 EVA1CP58658 441 aa26.88■■□□□ 1.89
SSH3-209ENST00000532600 TESK2Q96S53 571 aa26.88■■□□□ 1.89
SSH3-209ENST00000532600 USP35Q9P2H5 1018 aa26.88■■□□□ 1.89
SSH3-209ENST00000532600 AATKQ6ZMQ8 1374 aa26.87■■□□□ 1.89
SSH3-209ENST00000532600 TTC21AQ8NDW8 1320 aa26.87■■□□□ 1.89
SSH3-209ENST00000532600 BARGINQ6ZT62 677 aa26.86■■□□□ 1.89
SSH3-209ENST00000532600 NFAT5O94916 1531 aa26.85■■□□□ 1.89
SSH3-209ENST00000532600 SLC12A5Q9H2X9 1139 aa26.85■■□□□ 1.89
SSH3-209ENST00000532600 ZRANB1Q9UGI0 708 aa26.85■■□□□ 1.89
SSH3-209ENST00000532600 ST20-MTHFSA0A0A6YYL1 179 aa26.84■■□□□ 1.89
SSH3-209ENST00000532600 AXIN2Q9Y2T1 843 aa26.84■■□□□ 1.89
SSH3-209ENST00000532600 USP54Q70EL1 1684 aa26.83■■□□□ 1.89
SSH3-209ENST00000532600 ZBTB7CA1YPR0 619 aa26.83■■□□□ 1.89
SSH3-209ENST00000532600 ARHGEF25Q86VW2 580 aa26.82■■□□□ 1.88
SSH3-209ENST00000532600 TCP11L2Q8N4U5 519 aa26.82■■□□□ 1.88
SSH3-209ENST00000532600 RGPD1P0DJD0 1748 aa26.82■■□□□ 1.88
SSH3-209ENST00000532600 TNS1Q9HBL0 1735 aaKnown RBP26.82■■□□□ 1.88
SSH3-209ENST00000532600 RGPD5Q99666 1765 aa26.81■■□□□ 1.88
SSH3-209ENST00000532600 CRB1P82279 1406 aa26.81■■□□□ 1.88
SSH3-209ENST00000532600 TMC1Q8TDI8 760 aa26.8■■□□□ 1.88
SSH3-209ENST00000532600 PUS7Q96PZ0 661 aaKnown RBP26.8■■□□□ 1.88
SSH3-209ENST00000532600 USP31Q70CQ4 1352 aa26.8■■□□□ 1.88
SSH3-209ENST00000532600 SF3B2Q13435 895 aaKnown RBP26.79■■□□□ 1.88
SSH3-209ENST00000532600 NME9Q86XW9 330 aa26.79■■□□□ 1.88
SSH3-209ENST00000532600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.79■■□□□ 1.88
SSH3-209ENST00000532600 PARP4Q9UKK3 1724 aaKnown RBP26.79■■□□□ 1.88
SSH3-209ENST00000532600 SOX12O15370 315 aa26.78■■□□□ 1.88
SSH3-209ENST00000532600 A0A1W2PP64 1363 aa26.78■■□□□ 1.88
SSH3-209ENST00000532600 KCNH5Q8NCM2 988 aa26.77■■□□□ 1.88
SSH3-209ENST00000532600 THRAP3Q9Y2W1 955 aaKnown RBP26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms