RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 PLEKHH2Q8IVE3 1493 aa13.22□□□□□ -0.29
CHEK1-213ENST00000532449 FKBP5Q13451 457 aaPredicted RBP13.22□□□□□ -0.29
CHEK1-213ENST00000532449 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.22□□□□□ -0.29
CHEK1-213ENST00000532449 PRAM1Q96QH2 718 aa13.22□□□□□ -0.29
CHEK1-213ENST00000532449 CBX1P83916 185 aa13.21□□□□□ -0.29
CHEK1-213ENST00000532449 KIF16BQ96L93 1317 aa13.21□□□□□ -0.29
CHEK1-213ENST00000532449 RSPH4AQ5TD94 716 aa13.21□□□□□ -0.29
CHEK1-213ENST00000532449 C17orf53Q8N3J3 647 aaPredicted RBP13.21□□□□□ -0.29
CHEK1-213ENST00000532449 OTUD7AQ8TE49 926 aaPredicted RBP13.21□□□□□ -0.29
CHEK1-213ENST00000532449 OSCARQ8IYS5 282 aa13.21□□□□□ -0.3
CHEK1-213ENST00000532449 PKP1Q13835 747 aa13.2□□□□□ -0.3
CHEK1-213ENST00000532449 TSPYL6Q8N831 410 aa13.2□□□□□ -0.3
CHEK1-213ENST00000532449 STK31Q9BXU1 1019 aa13.2□□□□□ -0.3
CHEK1-213ENST00000532449 CHMP4BQ9H444 224 aaKnown RBP13.2□□□□□ -0.3
CHEK1-213ENST00000532449 DENND4BO75064 1496 aaPredicted RBP13.2□□□□□ -0.3
CHEK1-213ENST00000532449 CLCN1P35523 988 aa13.2□□□□□ -0.3
CHEK1-213ENST00000532449 ZSCAN30Q86W11 494 aa13.2□□□□□ -0.3
CHEK1-213ENST00000532449 ARHGAP5Q13017 1502 aa13.2□□□□□ -0.3
CHEK1-213ENST00000532449 DISP1Q96F81 1524 aa13.2□□□□□ -0.3
CHEK1-213ENST00000532449 HECW1Q76N89 1606 aa13.2□□□□□ -0.3
CHEK1-213ENST00000532449 RRP9O43818 475 aaKnown RBP13.19□□□□□ -0.3
CHEK1-213ENST00000532449 CD2BP2O95400 341 aaKnown RBP13.19□□□□□ -0.3
CHEK1-213ENST00000532449 BAG4O95429 457 aaKnown RBP13.19□□□□□ -0.3
CHEK1-213ENST00000532449 CDK11BP21127 795 aaKnown RBP13.19□□□□□ -0.3
CHEK1-213ENST00000532449 CEBPZQ03701 1054 aaKnown RBP13.19□□□□□ -0.3
CHEK1-213ENST00000532449 ZRSR1Q15695 479 aaKnown RBP13.19□□□□□ -0.3
CHEK1-213ENST00000532449 NUP160Q12769 1436 aa13.19□□□□□ -0.3
CHEK1-213ENST00000532449 MCM10Q7L590 875 aa13.19□□□□□ -0.3
CHEK1-213ENST00000532449 FERMT3Q86UX7 667 aa13.19□□□□□ -0.3
CHEK1-213ENST00000532449 ZNF330Q9Y3S2 320 aaPredicted RBP13.19□□□□□ -0.3
CHEK1-213ENST00000532449 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
CHEK1-213ENST00000532449 CCDC173Q0VFZ6 552 aa13.18□□□□□ -0.3
CHEK1-213ENST00000532449 INTS3Q68E01 1043 aaKnown RBP13.18□□□□□ -0.3
CHEK1-213ENST00000532449 EMILIN1Q9Y6C2 1016 aa13.18□□□□□ -0.3
CHEK1-213ENST00000532449 NUCB2P80303 420 aa13.18□□□□□ -0.3
CHEK1-213ENST00000532449 USP25Q9UHP3 1055 aa13.18□□□□□ -0.3
CHEK1-213ENST00000532449 GPATCH8Q9UKJ3 1502 aaKnown RBP13.18□□□□□ -0.3
CHEK1-213ENST00000532449 PRIM1P49642 420 aaKnown RBP13.18□□□□□ -0.3
CHEK1-213ENST00000532449 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
CHEK1-213ENST00000532449 HSP90B1P14625 803 aaKnown RBP13.17□□□□□ -0.3
CHEK1-213ENST00000532449 SYAP1Q96A49 352 aaPredicted RBP13.17□□□□□ -0.3
CHEK1-213ENST00000532449 WDR63Q8IWG1 891 aa13.17□□□□□ -0.3
CHEK1-213ENST00000532449 USP19O94966 1318 aa13.17□□□□□ -0.3
CHEK1-213ENST00000532449 REC8O95072 547 aa13.17□□□□□ -0.3
CHEK1-213ENST00000532449 HMMRO75330 724 aa13.16□□□□□ -0.3
CHEK1-213ENST00000532449 WAPLQ7Z5K2 1190 aa13.16□□□□□ -0.3
CHEK1-213ENST00000532449 SCAPERQ9BY12 1400 aa13.16□□□□□ -0.3
CHEK1-213ENST00000532449 ZNF771Q7L3S4 317 aaPredicted RBP13.16□□□□□ -0.3
CHEK1-213ENST00000532449 CFAP43Q8NDM7 1665 aa13.16□□□□□ -0.3
CHEK1-213ENST00000532449 RALGAPBQ86X10 1494 aa13.16□□□□□ -0.3
CHEK1-213ENST00000532449 ERBB4Q15303 1308 aa13.16□□□□□ -0.3
CHEK1-213ENST00000532449 SULT6B1Q6IMI4 303 aa13.16□□□□□ -0.3
CHEK1-213ENST00000532449 ZRANB1Q9UGI0 708 aa13.15□□□□□ -0.3
CHEK1-213ENST00000532449 PRAG1Q86YV5 1406 aa13.15□□□□□ -0.3
CHEK1-213ENST00000532449 IFT57Q9NWB7 429 aa13.15□□□□□ -0.3
CHEK1-213ENST00000532449 STK3Q13188 491 aa13.15□□□□□ -0.3
CHEK1-213ENST00000532449 CAMK4Q16566 473 aa13.15□□□□□ -0.3
CHEK1-213ENST00000532449 NUTM1Q86Y26 1132 aa13.14□□□□□ -0.31
CHEK1-213ENST00000532449 STK11IPQ8N1F8 1099 aa13.14□□□□□ -0.31
CHEK1-213ENST00000532449 TTC12Q9H892 705 aaPredicted RBP13.14□□□□□ -0.31
CHEK1-213ENST00000532449 SAMD9Q5K651 1589 aa13.14□□□□□ -0.31
CHEK1-213ENST00000532449 AMPHP49418 695 aa13.14□□□□□ -0.31
CHEK1-213ENST00000532449 JARID2Q92833 1246 aaPredicted RBP13.13□□□□□ -0.31
CHEK1-213ENST00000532449 COG3Q96JB2 828 aa13.13□□□□□ -0.31
CHEK1-213ENST00000532449 TRERF1Q96PN7 1200 aa13.13□□□□□ -0.31
CHEK1-213ENST00000532449 TSPYL4Q9UJ04 414 aa13.13□□□□□ -0.31
CHEK1-213ENST00000532449 ZSCAN23Q3MJ62 389 aa13.13□□□□□ -0.31
CHEK1-213ENST00000532449 API5Q9BZZ5 524 aaKnown RBP13.13□□□□□ -0.31
CHEK1-213ENST00000532449 KIAA0556O60303 1618 aa13.13□□□□□ -0.31
CHEK1-213ENST00000532449 TPM2P07951 284 aa13.13□□□□□ -0.31
CHEK1-213ENST00000532449 PTMSP20962 102 aa13.13□□□□□ -0.31
CHEK1-213ENST00000532449 NUP153P49790 1475 aaKnown RBP13.13□□□□□ -0.31
CHEK1-213ENST00000532449 RAPGEF3O95398 923 aa13.12□□□□□ -0.31
CHEK1-213ENST00000532449 RABEP1Q15276 862 aa13.12□□□□□ -0.31
CHEK1-213ENST00000532449 FMNL2Q96PY5 1086 aa13.12□□□□□ -0.31
CHEK1-213ENST00000532449 SURF6O75683 361 aaKnown RBP13.12□□□□□ -0.31
CHEK1-213ENST00000532449 GNAI1P63096 354 aa13.12□□□□□ -0.31
CHEK1-213ENST00000532449 KDM5BQ9UGL1 1544 aa13.12□□□□□ -0.31
CHEK1-213ENST00000532449 TXNDC2Q86VQ3 553 aa13.12□□□□□ -0.31
CHEK1-213ENST00000532449 TCEANC2Q96MN5 208 aa13.12□□□□□ -0.31
CHEK1-213ENST00000532449 TSPY26PQ9H489 355 aa13.12□□□□□ -0.31
CHEK1-213ENST00000532449 CHD1O14646 1710 aa13.11□□□□□ -0.31
CHEK1-213ENST00000532449 BCORL1Q5H9F3 1711 aa13.11□□□□□ -0.31
CHEK1-213ENST00000532449 VGFO15240 615 aaPredicted RBP13.11□□□□□ -0.31
CHEK1-213ENST00000532449 PHACTR3Q96KR7 559 aa13.11□□□□□ -0.31
CHEK1-213ENST00000532449 RBSNQ9H1K0 784 aa13.11□□□□□ -0.31
CHEK1-213ENST00000532449 SMC3Q9UQE7 1217 aa13.11□□□□□ -0.31
CHEK1-213ENST00000532449 NME9Q86XW9 330 aa13.11□□□□□ -0.31
CHEK1-213ENST00000532449 CYB5RLQ6IPT4 315 aa13.11□□□□□ -0.31
CHEK1-213ENST00000532449 BICD2Q8TD16 824 aa13.11□□□□□ -0.31
CHEK1-213ENST00000532449 TULP1O00294 542 aaPredicted RBP13.1□□□□□ -0.31
CHEK1-213ENST00000532449 ERCC6L2Q5T890 1561 aa13.1□□□□□ -0.31
CHEK1-213ENST00000532449 HCLS1P14317 486 aaPredicted RBP13.1□□□□□ -0.31
CHEK1-213ENST00000532449 AIMP1Q12904 312 aaKnown RBP13.1□□□□□ -0.31
CHEK1-213ENST00000532449 CCAR2Q8N163 923 aaKnown RBP13.1□□□□□ -0.31
CHEK1-213ENST00000532449 ANTXR1Q9H6X2 564 aa13.1□□□□□ -0.31
CHEK1-213ENST00000532449 NCKAP5LQ9HCH0 1330 aa13.1□□□□□ -0.31
CHEK1-213ENST00000532449 CREBRFQ8IUR6 639 aa13.1□□□□□ -0.31
CHEK1-213ENST00000532449 C8orf58Q8NAV2 365 aa13.1□□□□□ -0.31
CHEK1-213ENST00000532449 NGDNQ8NEJ9 315 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms