RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 MYT1Q01538 1121 aa25.51■■□□□ 1.67
PKP3-208ENST00000531857 DCAF11Q8TEB1 546 aa25.51■■□□□ 1.67
PKP3-208ENST00000531857 WASLO00401 505 aaPredicted RBP25.5■■□□□ 1.67
PKP3-208ENST00000531857 ITSN1Q15811 1721 aa25.49■■□□□ 1.67
PKP3-208ENST00000531857 EIF3AQ14152 1382 aaKnown RBP25.49■■□□□ 1.67
PKP3-208ENST00000531857 RGPD1P0DJD0 1748 aa25.46■■□□□ 1.67
PKP3-208ENST00000531857 LRP5O75197 1615 aa25.46■■□□□ 1.67
PKP3-208ENST00000531857 PAK3O75914 559 aaPredicted RBP25.45■■□□□ 1.66
PKP3-208ENST00000531857 NGDNQ8NEJ9 315 aaKnown RBP25.45■■□□□ 1.66
PKP3-208ENST00000531857 THSD7AQ9UPZ6 1657 aa25.45■■□□□ 1.66
PKP3-208ENST00000531857 FAM182BQ5T319 152 aa25.44■■□□□ 1.66
PKP3-208ENST00000531857 SPATA31A5Q5VU36 1347 aa25.43■■□□□ 1.66
PKP3-208ENST00000531857 SPATA31A7Q8IWB4 1347 aa25.43■■□□□ 1.66
PKP3-208ENST00000531857 PHRF1Q9P1Y6 1649 aaKnown RBP25.43■■□□□ 1.66
PKP3-208ENST00000531857 ATP7BP35670 1465 aa25.42■■□□□ 1.66
PKP3-208ENST00000531857 PSDA5PKW4 1024 aaPredicted RBP25.42■■□□□ 1.66
PKP3-208ENST00000531857 BAG6P46379 1132 aa25.42■■□□□ 1.66
PKP3-208ENST00000531857 TNS1Q9HBL0 1735 aaKnown RBP25.42■■□□□ 1.66
PKP3-208ENST00000531857 PRDM11Q9NQV5 511 aa25.4■■□□□ 1.66
PKP3-208ENST00000531857 NUDT16Q96DE0 195 aaKnown RBP25.39■■□□□ 1.66
PKP3-208ENST00000531857 TOPAZ1Q8N9V7 1692 aa25.39■■□□□ 1.65
PKP3-208ENST00000531857 EN1Q05925 392 aaPredicted RBP25.38■■□□□ 1.65
PKP3-208ENST00000531857 STAC3Q96MF2 364 aa25.38■■□□□ 1.65
PKP3-208ENST00000531857 KIAA0232Q92628 1395 aa25.37■■□□□ 1.65
PKP3-208ENST00000531857 CHRNA2Q15822 529 aa25.36■■□□□ 1.65
PKP3-208ENST00000531857 HRCP23327 699 aa25.34■■□□□ 1.65
PKP3-208ENST00000531857 NUTM2GQ5VZR2 741 aa25.34■■□□□ 1.65
PKP3-208ENST00000531857 SPATA31A1Q5TZJ5 1347 aa25.34■■□□□ 1.65
PKP3-208ENST00000531857 CDK19Q9BWU1 502 aa25.33■■□□□ 1.65
PKP3-208ENST00000531857 KIAA1210Q9ULL0 1709 aa25.32■■□□□ 1.64
PKP3-208ENST00000531857 ZC3H6P61129 1189 aaKnown RBP25.32■■□□□ 1.64
PKP3-208ENST00000531857 STRN4Q9NRL3 753 aa25.32■■□□□ 1.64
PKP3-208ENST00000531857 POLR3AO14802 1390 aaPredicted RBP25.31■■□□□ 1.64
PKP3-208ENST00000531857 DISP2A7MBM2 1401 aa25.3■■□□□ 1.64
PKP3-208ENST00000531857 NRKQ7Z2Y5 1582 aa25.29■■□□□ 1.64
PKP3-208ENST00000531857 ACEP12821 1306 aa25.29■■□□□ 1.64
PKP3-208ENST00000531857 NBPF8Q3BBV2 869 aa25.28■■□□□ 1.64
PKP3-208ENST00000531857 R3HDM1Q15032 1099 aaKnown RBP25.27■■□□□ 1.64
PKP3-208ENST00000531857 EZH2Q15910 746 aaKnown RBP25.27■■□□□ 1.64
PKP3-208ENST00000531857 USP35Q9P2H5 1018 aa25.26■■□□□ 1.63
PKP3-208ENST00000531857 CCDC61Q9Y6R9 512 aa25.26■■□□□ 1.63
PKP3-208ENST00000531857 LMO7Q8WWI1 1683 aa25.26■■□□□ 1.63
PKP3-208ENST00000531857 CAMTA1Q9Y6Y1 1673 aa25.26■■□□□ 1.63
PKP3-208ENST00000531857 TRIM37O94972 964 aa25.25■■□□□ 1.63
PKP3-208ENST00000531857 SSH2Q76I76 1423 aa25.24■■□□□ 1.63
PKP3-208ENST00000531857 PLEKHG3A1L390 1219 aa25.24■■□□□ 1.63
PKP3-208ENST00000531857 NBPF1Q3BBV0 1214 aa25.23■■□□□ 1.63
PKP3-208ENST00000531857 FAM196AQ6ZSG2 479 aa25.23■■□□□ 1.63
PKP3-208ENST00000531857 CAMKK2Q96RR4 588 aa25.23■■□□□ 1.63
PKP3-208ENST00000531857 EVA1CP58658 441 aa25.22■■□□□ 1.63
PKP3-208ENST00000531857 ABTB2Q8N961 1025 aa25.22■■□□□ 1.63
PKP3-208ENST00000531857 RREB1Q92766 1687 aa25.21■■□□□ 1.63
PKP3-208ENST00000531857 LARP1Q6PKG0 1096 aaKnown RBP25.2■■□□□ 1.62
PKP3-208ENST00000531857 BARGINQ6ZT62 677 aa25.2■■□□□ 1.62
PKP3-208ENST00000531857 NUP188Q5SRE5 1749 aa25.19■■□□□ 1.62
PKP3-208ENST00000531857 CPDO75976 1380 aa25.18■■□□□ 1.62
PKP3-208ENST00000531857 USP19O94966 1318 aa25.18■■□□□ 1.62
PKP3-208ENST00000531857 QRICH2Q9H0J4 1663 aa25.18■■□□□ 1.62
PKP3-208ENST00000531857 APBA3O96018 575 aa25.18■■□□□ 1.62
PKP3-208ENST00000531857 PPIP5K1Q6PFW1 1433 aa25.17■■□□□ 1.62
PKP3-208ENST00000531857 PDE3BQ13370 1112 aa25.16■■□□□ 1.62
PKP3-208ENST00000531857 PARP4Q9UKK3 1724 aaKnown RBP25.16■■□□□ 1.62
PKP3-208ENST00000531857 SRPK2P78362 688 aaKnown RBP25.15■■□□□ 1.62
PKP3-208ENST00000531857 TCP11L2Q8N4U5 519 aa25.15■■□□□ 1.62
PKP3-208ENST00000531857 CABP2Q9NPB3 220 aa25.14■■□□□ 1.62
PKP3-208ENST00000531857 GCP02774 474 aa25.13■■□□□ 1.61
PKP3-208ENST00000531857 NLRP13Q86W25 1043 aa25.13■■□□□ 1.61
PKP3-208ENST00000531857 PARD3Q8TEW0 1356 aa25.13■■□□□ 1.61
PKP3-208ENST00000531857 COL5A2P05997 1499 aaPredicted RBP25.13■■□□□ 1.61
PKP3-208ENST00000531857 CENPJQ9HC77 1338 aaPredicted RBP25.12■■□□□ 1.61
PKP3-208ENST00000531857 SBF2Q86WG5 1849 aa25.1■■□□□ 1.61
PKP3-208ENST00000531857 THRAP3Q9Y2W1 955 aaKnown RBP25.09■■□□□ 1.61
PKP3-208ENST00000531857 PEAK1Q9H792 1746 aa25.09■■□□□ 1.61
PKP3-208ENST00000531857 COL18A1P39060 1754 aa25.08■■□□□ 1.6
PKP3-208ENST00000531857 PIK3C2AO00443 1686 aa25.07■■□□□ 1.6
PKP3-208ENST00000531857 USP6P35125 1406 aa25.07■■□□□ 1.6
PKP3-208ENST00000531857 CABP1Q9NZU7 370 aa25.07■■□□□ 1.6
PKP3-208ENST00000531857 SLIT3O75094 1523 aa25.07■■□□□ 1.6
PKP3-208ENST00000531857 RGPD5Q99666 1765 aa25.06■■□□□ 1.6
PKP3-208ENST00000531857 LRRC37A3O60309 1634 aa25.06■■□□□ 1.6
PKP3-208ENST00000531857 ZBTB7CA1YPR0 619 aa25.06■■□□□ 1.6
PKP3-208ENST00000531857 WNK3Q9BYP7 1800 aa25.06■■□□□ 1.6
PKP3-208ENST00000531857 CRB1P82279 1406 aa25.05■■□□□ 1.6
PKP3-208ENST00000531857 BRD4O60885 1362 aaPredicted RBP25.05■■□□□ 1.6
PKP3-208ENST00000531857 NLRP6P59044 892 aa25.04■■□□□ 1.6
PKP3-208ENST00000531857 AATKQ6ZMQ8 1374 aa25.02■■□□□ 1.6
PKP3-208ENST00000531857 TRPM1Q7Z4N2 1603 aa25.01■■□□□ 1.59
PKP3-208ENST00000531857 AKAP12Q02952 1782 aa25.01■■□□□ 1.59
PKP3-208ENST00000531857 NBPF14Q5TI25 921 aa25.01■■□□□ 1.59
PKP3-208ENST00000531857 RGPD3A6NKT7 1758 aaPredicted RBP25■■□□□ 1.59
PKP3-208ENST00000531857 RGPD4Q7Z3J3 1758 aa25■■□□□ 1.59
PKP3-208ENST00000531857 OVOS2A0A0G2JMS6 1433 aa24.99■■□□□ 1.59
PKP3-208ENST00000531857 OVOS2A0A0J9YW53 1432 aa24.99■■□□□ 1.59
PKP3-208ENST00000531857 OVOS2Q6IE36 1432 aa24.99■■□□□ 1.59
PKP3-208ENST00000531857 L3MBTL2Q969R5 705 aa24.98■■□□□ 1.59
PKP3-208ENST00000531857 AXIN2Q9Y2T1 843 aa24.98■■□□□ 1.59
PKP3-208ENST00000531857 TOM1L2Q6ZVM7 507 aa24.96■■□□□ 1.59
PKP3-208ENST00000531857 PTF1AQ7RTS3 328 aa24.96■■□□□ 1.59
PKP3-208ENST00000531857 DDB1Q16531 1140 aa24.95■■□□□ 1.58
PKP3-208ENST00000531857 EVC2Q86UK5 1308 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms