RNA–Protein interactions for RNA: ENST00000531188.5

RPS3-217, Transcript of ribosomal protein S3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3, Length 2,097 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-217ENST00000531188 MAP2P11137 1827 aaKnown RBP16.23■□□□□ 0.19
RPS3-217ENST00000531188 EDC4Q6P2E9 1401 aaKnown RBP16.22■□□□□ 0.19
RPS3-217ENST00000531188 NKTRP30414 1462 aaKnown RBP16.22■□□□□ 0.19
RPS3-217ENST00000531188 RBM33Q96EV2 1170 aaKnown RBP16.22■□□□□ 0.19
RPS3-217ENST00000531188 RBM19Q9Y4C8 960 aaKnown RBP16.21■□□□□ 0.19
RPS3-217ENST00000531188 FMN2Q9NZ56 1722 aa16.2■□□□□ 0.18
RPS3-217ENST00000531188 KDM4FA0A1W2PPD8 638 aa16.2■□□□□ 0.18
RPS3-217ENST00000531188 ZRANB1Q9UGI0 708 aa16.2■□□□□ 0.18
RPS3-217ENST00000531188 ACEP12821 1306 aa16.19■□□□□ 0.18
RPS3-217ENST00000531188 NRKQ7Z2Y5 1582 aa16.19■□□□□ 0.18
RPS3-217ENST00000531188 NME9Q86XW9 330 aa16.19■□□□□ 0.18
RPS3-217ENST00000531188 CCDC146Q8IYE0 955 aa16.19■□□□□ 0.18
RPS3-217ENST00000531188 SMG6Q86US8 1419 aaKnown RBP16.19■□□□□ 0.18
RPS3-217ENST00000531188 PLEKHG3A1L390 1219 aa16.18■□□□□ 0.18
RPS3-217ENST00000531188 FBLN1P23142 703 aa16.18■□□□□ 0.18
RPS3-217ENST00000531188 ZNF692Q9BU19 519 aaPredicted RBP16.17■□□□□ 0.18
RPS3-217ENST00000531188 PMFBP1Q8TBY8 1022 aa16.17■□□□□ 0.18
RPS3-217ENST00000531188 NUDCQ9Y266 331 aa16.16■□□□□ 0.18
RPS3-217ENST00000531188 CFAP53Q96M91 514 aa16.15■□□□□ 0.18
RPS3-217ENST00000531188 HSPA2P54652 639 aa16.15■□□□□ 0.18
RPS3-217ENST00000531188 CDCA7LQ96GN5 454 aa16.14■□□□□ 0.17
RPS3-217ENST00000531188 USP6P35125 1406 aa16.14■□□□□ 0.17
RPS3-217ENST00000531188 COL3A1P02461 1466 aaPredicted RBP16.14■□□□□ 0.17
RPS3-217ENST00000531188 NWD1Q149M9 1564 aa16.14■□□□□ 0.17
RPS3-217ENST00000531188 TTC21BQ7Z4L5 1316 aa16.14■□□□□ 0.17
RPS3-217ENST00000531188 APAF1O14727 1248 aa16.13■□□□□ 0.17
RPS3-217ENST00000531188 STRCP1A6NGW2 1772 aa16.13■□□□□ 0.17
RPS3-217ENST00000531188 ANKARQ7Z5J8 1434 aa16.12■□□□□ 0.17
RPS3-217ENST00000531188 POLKQ9UBT6 870 aa16.12■□□□□ 0.17
RPS3-217ENST00000531188 COG3Q96JB2 828 aa16.11■□□□□ 0.17
RPS3-217ENST00000531188 SSH2Q76I76 1423 aa16.11■□□□□ 0.17
RPS3-217ENST00000531188 ADGRL3Q9HAR2 1447 aa16.11■□□□□ 0.17
RPS3-217ENST00000531188 FANCIQ9NVI1 1328 aa16.11■□□□□ 0.17
RPS3-217ENST00000531188 NGDNQ8NEJ9 315 aaKnown RBP16.1■□□□□ 0.17
RPS3-217ENST00000531188 PPM1GO15355 546 aaPredicted RBP16.1■□□□□ 0.17
RPS3-217ENST00000531188 IRX6P78412 446 aaPredicted RBP16.1■□□□□ 0.17
RPS3-217ENST00000531188 PDE3BQ13370 1112 aa16.1■□□□□ 0.17
RPS3-217ENST00000531188 PNPLA6Q8IY17 1366 aa16.09■□□□□ 0.17
RPS3-217ENST00000531188 U2AF1L5P0DN76 240 aaPredicted RBP16.09■□□□□ 0.17
RPS3-217ENST00000531188 U2AF1Q01081 240 aaKnown RBP eCLIP16.09■□□□□ 0.17
RPS3-217ENST00000531188 EMILIN1Q9Y6C2 1016 aa16.09■□□□□ 0.17
RPS3-217ENST00000531188 STRCQ7RTU9 1775 aa16.08■□□□□ 0.17
RPS3-217ENST00000531188 ZNF521Q96K83 1311 aa16.08■□□□□ 0.17
RPS3-217ENST00000531188 LMTK3Q96Q04 1460 aa16.08■□□□□ 0.16
RPS3-217ENST00000531188 C14orf37Q86TY3 774 aa16.07■□□□□ 0.16
RPS3-217ENST00000531188 PROSER2Q86WR7 435 aaPredicted RBP16.07■□□□□ 0.16
RPS3-217ENST00000531188 PIK3C2AO00443 1686 aa16.07■□□□□ 0.16
RPS3-217ENST00000531188 OVOS2A0A0J9YW53 1432 aa16.07■□□□□ 0.16
RPS3-217ENST00000531188 OVOS2Q6IE36 1432 aa16.07■□□□□ 0.16
RPS3-217ENST00000531188 U2SURPO15042 1029 aaKnown RBP16.07■□□□□ 0.16
RPS3-217ENST00000531188 RRS1Q15050 365 aaKnown RBP16.07■□□□□ 0.16
RPS3-217ENST00000531188 DIAPH1O60610 1272 aaKnown RBP16.06■□□□□ 0.16
RPS3-217ENST00000531188 RUNDC1Q96C34 613 aa16.06■□□□□ 0.16
RPS3-217ENST00000531188 AATKQ6ZMQ8 1374 aa16.06■□□□□ 0.16
RPS3-217ENST00000531188 IQSEC2Q5JU85 1478 aa16.05■□□□□ 0.16
RPS3-217ENST00000531188 MARF1Q9Y4F3 1742 aaKnown RBP16.05■□□□□ 0.16
RPS3-217ENST00000531188 TCP11L2Q8N4U5 519 aa16.04■□□□□ 0.16
RPS3-217ENST00000531188 CNKSR2Q8WXI2 1034 aa16.04■□□□□ 0.16
RPS3-217ENST00000531188 PHF8Q9UPP1 1060 aa16.04■□□□□ 0.16
RPS3-217ENST00000531188 RRP7AQ9Y3A4 280 aaKnown RBP16.04■□□□□ 0.16
RPS3-217ENST00000531188 TTC21AQ8NDW8 1320 aa16.04■□□□□ 0.16
RPS3-217ENST00000531188 ERICH6BQ5W0A0 696 aa16.04■□□□□ 0.16
RPS3-217ENST00000531188 NEUROD2Q15784 382 aa16.03■□□□□ 0.16
RPS3-217ENST00000531188 PEAK1Q9H792 1746 aa16.03■□□□□ 0.16
RPS3-217ENST00000531188 ESCO1Q5FWF5 840 aa16.03■□□□□ 0.16
RPS3-217ENST00000531188 CDK12Q9NYV4 1490 aaPredicted RBP16.02■□□□□ 0.16
RPS3-217ENST00000531188 GOLGA2Q08379 1002 aa16.02■□□□□ 0.15
RPS3-217ENST00000531188 SPINK5Q9NQ38 1064 aaPredicted RBP16.02■□□□□ 0.15
RPS3-217ENST00000531188 SOX12O15370 315 aa16.01■□□□□ 0.15
RPS3-217ENST00000531188 PLEKHF1Q96S99 279 aa16.01■□□□□ 0.15
RPS3-217ENST00000531188 USP31Q70CQ4 1352 aa16.01■□□□□ 0.15
RPS3-217ENST00000531188 RNF123Q5XPI4 1314 aa16.01■□□□□ 0.15
RPS3-217ENST00000531188 XIRP1Q702N8 1843 aaKnown RBP16■□□□□ 0.15
RPS3-217ENST00000531188 SLFN5Q08AF3 891 aa16■□□□□ 0.15
RPS3-217ENST00000531188 DUSP27Q5VZP5 1158 aa16■□□□□ 0.15
RPS3-217ENST00000531188 NUTM2GQ5VZR2 741 aa16■□□□□ 0.15
RPS3-217ENST00000531188 WWC1Q8IX03 1113 aa16■□□□□ 0.15
RPS3-217ENST00000531188 ORAI2Q96SN7 254 aa16■□□□□ 0.15
RPS3-217ENST00000531188 IL13P35225 146 aa15.99■□□□□ 0.15
RPS3-217ENST00000531188 RCAN3Q9UKA8 241 aa15.99■□□□□ 0.15
RPS3-217ENST00000531188 PAK3O75914 559 aaPredicted RBP15.99■□□□□ 0.15
RPS3-217ENST00000531188 TMEM94Q12767 1356 aa15.99■□□□□ 0.15
RPS3-217ENST00000531188 LRRC7Q96NW7 1537 aa15.99■□□□□ 0.15
RPS3-217ENST00000531188 USP54Q70EL1 1684 aa15.99■□□□□ 0.15
RPS3-217ENST00000531188 NGEFQ8N5V2 710 aa15.98■□□□□ 0.15
RPS3-217ENST00000531188 C19orf44Q9H6X5 657 aa15.98■□□□□ 0.15
RPS3-217ENST00000531188 NLRP6P59044 892 aa15.98■□□□□ 0.15
RPS3-217ENST00000531188 TRMT2AQ8IZ69 625 aaKnown RBP15.98■□□□□ 0.15
RPS3-217ENST00000531188 HMOX1P09601 288 aa15.97■□□□□ 0.15
RPS3-217ENST00000531188 ABTB2Q8N961 1025 aa15.97■□□□□ 0.15
RPS3-217ENST00000531188 ERICH6Q7L0X2 663 aa15.96■□□□□ 0.15
RPS3-217ENST00000531188 PSME1Q06323 249 aa15.96■□□□□ 0.15
RPS3-217ENST00000531188 RSPH6AQ9H0K4 717 aa15.96■□□□□ 0.15
RPS3-217ENST00000531188 FCHSD2O94868 740 aa15.95■□□□□ 0.14
RPS3-217ENST00000531188 C1orf167Q5SNV9 1468 aa15.95■□□□□ 0.14
RPS3-217ENST00000531188 MAP3K19Q56UN5 1328 aa15.95■□□□□ 0.14
RPS3-217ENST00000531188 MAPK8IP3Q9UPT6 1336 aa15.95■□□□□ 0.14
RPS3-217ENST00000531188 FOXO3O43524 673 aa15.95■□□□□ 0.14
RPS3-217ENST00000531188 HOXD11P31277 338 aaPredicted RBP15.95■□□□□ 0.14
RPS3-217ENST00000531188 PRKAR2BP31323 418 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms