RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 TTC21BQ7Z4L5 1316 aa18.92■□□□□ 0.62
NXF1-207ENST00000530875 MORC1Q86VD1 984 aa18.92■□□□□ 0.62
NXF1-207ENST00000530875 SSH2Q76I76 1423 aa18.91■□□□□ 0.62
NXF1-207ENST00000530875 NME9Q86XW9 330 aa18.91■□□□□ 0.62
NXF1-207ENST00000530875 FOXO3O43524 673 aa18.9■□□□□ 0.62
NXF1-207ENST00000530875 SLAIN2Q9P270 581 aa18.9■□□□□ 0.62
NXF1-207ENST00000530875 CCDC184Q52MB2 194 aa18.9■□□□□ 0.62
NXF1-207ENST00000530875 PSME1Q06323 249 aa18.89■□□□□ 0.61
NXF1-207ENST00000530875 KIF20BQ96Q89 1820 aa18.89■□□□□ 0.61
NXF1-207ENST00000530875 KIF1AQ12756 1690 aa18.89■□□□□ 0.61
NXF1-207ENST00000530875 TNNT2P45379 298 aaPredicted RBP18.88■□□□□ 0.61
NXF1-207ENST00000530875 ZRANB1Q9UGI0 708 aa18.88■□□□□ 0.61
NXF1-207ENST00000530875 PPP2R1AP30153 589 aa18.88■□□□□ 0.61
NXF1-207ENST00000530875 XPCQ01831 940 aaPredicted RBP18.87■□□□□ 0.61
NXF1-207ENST00000530875 TTC21AQ8NDW8 1320 aa18.87■□□□□ 0.61
NXF1-207ENST00000530875 PAK3O75914 559 aaPredicted RBP18.86■□□□□ 0.61
NXF1-207ENST00000530875 BRINP3Q76B58 766 aa18.86■□□□□ 0.61
NXF1-207ENST00000530875 NLRP13Q86W25 1043 aa18.86■□□□□ 0.61
NXF1-207ENST00000530875 MRS2Q9HD23 443 aa18.86■□□□□ 0.61
NXF1-207ENST00000530875 DDX17Q92841 729 aaKnown RBP18.85■□□□□ 0.61
NXF1-207ENST00000530875 ANKRD26Q9UPS8 1709 aa18.85■□□□□ 0.61
NXF1-207ENST00000530875 KRT28Q7Z3Y7 464 aa18.84■□□□□ 0.61
NXF1-207ENST00000530875 COG3Q96JB2 828 aa18.84■□□□□ 0.61
NXF1-207ENST00000530875 GTF3C3Q9Y5Q9 886 aa18.84■□□□□ 0.61
NXF1-207ENST00000530875 BRD4O60885 1362 aaPredicted RBP18.84■□□□□ 0.61
NXF1-207ENST00000530875 NPHP3Q7Z494 1330 aa18.81■□□□□ 0.6
NXF1-207ENST00000530875 PIK3C2AO00443 1686 aa18.81■□□□□ 0.6
NXF1-207ENST00000530875 ABTB2Q8N961 1025 aa18.81■□□□□ 0.6
NXF1-207ENST00000530875 OVOS2A0A0J9YW53 1432 aa18.81■□□□□ 0.6
NXF1-207ENST00000530875 OVOS2Q6IE36 1432 aa18.81■□□□□ 0.6
NXF1-207ENST00000530875 NUTM2GQ5VZR2 741 aa18.8■□□□□ 0.6
NXF1-207ENST00000530875 NLRP6P59044 892 aa18.8■□□□□ 0.6
NXF1-207ENST00000530875 USP31Q70CQ4 1352 aa18.79■□□□□ 0.6
NXF1-207ENST00000530875 FBLN1P23142 703 aa18.79■□□□□ 0.6
NXF1-207ENST00000530875 TRPM3Q9HCF6 1732 aaPredicted RBP18.78■□□□□ 0.6
NXF1-207ENST00000530875 PXDNQ92626 1479 aa18.77■□□□□ 0.6
NXF1-207ENST00000530875 MTHFSP49914 203 aa18.76■□□□□ 0.59
NXF1-207ENST00000530875 LMOD2Q6P5Q4 547 aa18.76■□□□□ 0.59
NXF1-207ENST00000530875 SOX12O15370 315 aa18.75■□□□□ 0.59
NXF1-207ENST00000530875 SBNO1A3KN83 1393 aa18.74■□□□□ 0.59
NXF1-207ENST00000530875 FAM9BQ8IZU0 186 aa18.74■□□□□ 0.59
NXF1-207ENST00000530875 AATKQ6ZMQ8 1374 aa18.74■□□□□ 0.59
NXF1-207ENST00000530875 TOM1O60784 492 aa18.74■□□□□ 0.59
NXF1-207ENST00000530875 PNISRQ8TF01 805 aaKnown RBP18.74■□□□□ 0.59
NXF1-207ENST00000530875 POLKQ9UBT6 870 aa18.74■□□□□ 0.59
NXF1-207ENST00000530875 ROBO1Q9Y6N7 1651 aa18.73■□□□□ 0.59
NXF1-207ENST00000530875 SOS2Q07890 1332 aaPredicted RBP18.73■□□□□ 0.59
NXF1-207ENST00000530875 CERKQ8TCT0 537 aa18.73■□□□□ 0.59
NXF1-207ENST00000530875 MARF1Q9Y4F3 1742 aaKnown RBP18.73■□□□□ 0.59
NXF1-207ENST00000530875 USP54Q70EL1 1684 aa18.73■□□□□ 0.59
NXF1-207ENST00000530875 RRS1Q15050 365 aaKnown RBP18.72■□□□□ 0.59
NXF1-207ENST00000530875 TNS3Q68CZ2 1445 aa18.72■□□□□ 0.59
NXF1-207ENST00000530875 PLEKHG5O94827 1062 aa18.72■□□□□ 0.59
NXF1-207ENST00000530875 EMILIN1Q9Y6C2 1016 aa18.72■□□□□ 0.59
NXF1-207ENST00000530875 IQSEC2Q5JU85 1478 aa18.72■□□□□ 0.59
NXF1-207ENST00000530875 ALS2Q96Q42 1657 aa18.71■□□□□ 0.59
NXF1-207ENST00000530875 NHSL1Q5SYE7 1610 aa18.71■□□□□ 0.59
NXF1-207ENST00000530875 SPATA31A3Q5VYP0 1347 aa18.71■□□□□ 0.59
NXF1-207ENST00000530875 UBAP1LF5GYI3 381 aa18.71■□□□□ 0.59
NXF1-207ENST00000530875 PPM1GO15355 546 aaPredicted RBP18.71■□□□□ 0.59
NXF1-207ENST00000530875 PIP4K2BP78356 416 aa18.7■□□□□ 0.58
NXF1-207ENST00000530875 CFAP53Q96M91 514 aa18.7■□□□□ 0.58
NXF1-207ENST00000530875 SMG6Q86US8 1419 aaKnown RBP18.69■□□□□ 0.58
NXF1-207ENST00000530875 MAP2P11137 1827 aaKnown RBP18.68■□□□□ 0.58
NXF1-207ENST00000530875 USP19O94966 1318 aa18.67■□□□□ 0.58
NXF1-207ENST00000530875 ARHGEF10O15013 1369 aa18.67■□□□□ 0.58
NXF1-207ENST00000530875 MAP3K19Q56UN5 1328 aa18.67■□□□□ 0.58
NXF1-207ENST00000530875 SLIT3O75094 1523 aa18.66■□□□□ 0.58
NXF1-207ENST00000530875 PNPLA6Q8IY17 1366 aa18.66■□□□□ 0.58
NXF1-207ENST00000530875 KCNH5Q8NCM2 988 aa18.66■□□□□ 0.58
NXF1-207ENST00000530875 AHDC1Q5TGY3 1603 aaPredicted RBP18.66■□□□□ 0.58
NXF1-207ENST00000530875 MED1Q15648 1581 aaPredicted RBP18.65■□□□□ 0.58
NXF1-207ENST00000530875 COL3A1P02461 1466 aaPredicted RBP18.65■□□□□ 0.58
NXF1-207ENST00000530875 GCP02774 474 aa18.65■□□□□ 0.58
NXF1-207ENST00000530875 WDR43Q15061 677 aaKnown RBP eCLIP18.65■□□□□ 0.58
NXF1-207ENST00000530875 NFAT5O94916 1531 aa18.65■□□□□ 0.58
NXF1-207ENST00000530875 CDK12Q9NYV4 1490 aaPredicted RBP18.65■□□□□ 0.58
NXF1-207ENST00000530875 CABLES1Q8TDN4 633 aa18.64■□□□□ 0.57
NXF1-207ENST00000530875 INSRP06213 1382 aa18.63■□□□□ 0.57
NXF1-207ENST00000530875 PEAK1Q9H792 1746 aa18.63■□□□□ 0.57
NXF1-207ENST00000530875 ADAMTS8Q9UP79 889 aa18.63■□□□□ 0.57
NXF1-207ENST00000530875 SHPRHQ149N8 1683 aa18.62■□□□□ 0.57
NXF1-207ENST00000530875 DIAPH1O60610 1272 aaKnown RBP18.62■□□□□ 0.57
NXF1-207ENST00000530875 AMPHP49418 695 aa18.62■□□□□ 0.57
NXF1-207ENST00000530875 LRRC59Q96AG4 307 aaKnown RBP18.61■□□□□ 0.57
NXF1-207ENST00000530875 ZBTB7CA1YPR0 619 aa18.61■□□□□ 0.57
NXF1-207ENST00000530875 HSP90AB2PQ58FF8 381 aa18.61■□□□□ 0.57
NXF1-207ENST00000530875 FLT4P35916 1363 aa18.6■□□□□ 0.57
NXF1-207ENST00000530875 PHRF1Q9P1Y6 1649 aaKnown RBP18.6■□□□□ 0.57
NXF1-207ENST00000530875 U2SURPO15042 1029 aaKnown RBP18.59■□□□□ 0.57
NXF1-207ENST00000530875 NUDCQ9Y266 331 aa18.59■□□□□ 0.57
NXF1-207ENST00000530875 PHLPP1O60346 1717 aa18.59■□□□□ 0.57
NXF1-207ENST00000530875 HOXC9P31274 260 aa18.59■□□□□ 0.57
NXF1-207ENST00000530875 ZC3H6P61129 1189 aaKnown RBP18.59■□□□□ 0.57
NXF1-207ENST00000530875 ARHGEF25Q86VW2 580 aa18.59■□□□□ 0.57
NXF1-207ENST00000530875 CRYBG1Q9Y4K1 1723 aa18.58■□□□□ 0.57
NXF1-207ENST00000530875 LTN1O94822 1766 aa18.58■□□□□ 0.56
NXF1-207ENST00000530875 IL13P35225 146 aa18.58■□□□□ 0.56
NXF1-207ENST00000530875 HNRNPUQ00839 825 aaKnown RBP eCLIP18.58■□□□□ 0.56
NXF1-207ENST00000530875 KIF24Q5T7B8 1368 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms