RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 TMC1Q8TDI8 760 aa22.29■■□□□ 1.16
BRK1-201ENST00000530758 SSH2Q76I76 1423 aa22.29■■□□□ 1.16
BRK1-201ENST00000530758 TERF2IPQ9NYB0 399 aa22.28■■□□□ 1.16
BRK1-201ENST00000530758 USP6P35125 1406 aa22.28■■□□□ 1.16
BRK1-201ENST00000530758 SPATA31A3Q5VYP0 1347 aa22.27■■□□□ 1.16
BRK1-201ENST00000530758 WASHC2AQ641Q2 1341 aa22.27■■□□□ 1.16
BRK1-201ENST00000530758 ANKRD36BQ8N2N9 1353 aa22.26■■□□□ 1.15
BRK1-201ENST00000530758 CCDC7Q96M83 1385 aa22.26■■□□□ 1.15
BRK1-201ENST00000530758 ALS2Q96Q42 1657 aa22.26■■□□□ 1.15
BRK1-201ENST00000530758 XPCQ01831 940 aaPredicted RBP22.25■■□□□ 1.15
BRK1-201ENST00000530758 HDGFL2Q7Z4V5 671 aaPredicted RBP22.25■■□□□ 1.15
BRK1-201ENST00000530758 A0A1W2PP64 1363 aa22.25■■□□□ 1.15
BRK1-201ENST00000530758 NRKQ7Z2Y5 1582 aa22.24■■□□□ 1.15
BRK1-201ENST00000530758 KTN1Q86UP2 1357 aaKnown RBP22.24■■□□□ 1.15
BRK1-201ENST00000530758 TNS3Q68CZ2 1445 aa22.23■■□□□ 1.15
BRK1-201ENST00000530758 COL22A1Q8NFW1 1626 aaPredicted RBP22.23■■□□□ 1.15
BRK1-201ENST00000530758 NUTM2BA6NNL0 878 aaPredicted RBP22.21■■□□□ 1.15
BRK1-201ENST00000530758 NUTM2EB1AL46 878 aaPredicted RBP22.21■■□□□ 1.15
BRK1-201ENST00000530758 NUTM2AQ8IVF1 878 aaPredicted RBP22.21■■□□□ 1.15
BRK1-201ENST00000530758 EDC4Q6P2E9 1401 aaKnown RBP22.21■■□□□ 1.15
BRK1-201ENST00000530758 TTC21BQ7Z4L5 1316 aa22.2■■□□□ 1.14
BRK1-201ENST00000530758 TTC21AQ8NDW8 1320 aa22.2■■□□□ 1.14
BRK1-201ENST00000530758 ARHGEF10O15013 1369 aa22.2■■□□□ 1.14
BRK1-201ENST00000530758 POLR3GLQ9BT43 218 aa22.18■■□□□ 1.14
BRK1-201ENST00000530758 CARD14Q9BXL6 1004 aa22.18■■□□□ 1.14
BRK1-201ENST00000530758 PAK3O75914 559 aaPredicted RBP22.16■■□□□ 1.14
BRK1-201ENST00000530758 MEX3CQ5U5Q3 659 aaKnown RBP22.16■■□□□ 1.14
BRK1-201ENST00000530758 PANK3Q9H999 370 aa22.16■■□□□ 1.14
BRK1-201ENST00000530758 PIK3C2AO00443 1686 aa22.15■■□□□ 1.14
BRK1-201ENST00000530758 USP54Q70EL1 1684 aa22.15■■□□□ 1.14
BRK1-201ENST00000530758 ABTB2Q8N961 1025 aa22.15■■□□□ 1.14
BRK1-201ENST00000530758 CRYBG1Q9Y4K1 1723 aa22.14■■□□□ 1.14
BRK1-201ENST00000530758 USP31Q70CQ4 1352 aa22.14■■□□□ 1.14
BRK1-201ENST00000530758 MARF1Q9Y4F3 1742 aaKnown RBP22.12■■□□□ 1.13
BRK1-201ENST00000530758 AFF2P51816 1311 aa22.11■■□□□ 1.13
BRK1-201ENST00000530758 PER1O15534 1290 aaPredicted RBP22.11■■□□□ 1.13
BRK1-201ENST00000530758 NLRP13Q86W25 1043 aa22.11■■□□□ 1.13
BRK1-201ENST00000530758 USP19O94966 1318 aa22.1■■□□□ 1.13
BRK1-201ENST00000530758 ZNF316A6NFI3 1004 aaPredicted RBP22.1■■□□□ 1.13
BRK1-201ENST00000530758 LMOD2Q6P5Q4 547 aa22.1■■□□□ 1.13
BRK1-201ENST00000530758 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.1■■□□□ 1.13
BRK1-201ENST00000530758 ABCA3Q99758 1704 aa22.1■■□□□ 1.13
BRK1-201ENST00000530758 NSD3Q9BZ95 1437 aa22.09■■□□□ 1.13
BRK1-201ENST00000530758 FYB1O15117 783 aa22.09■■□□□ 1.13
BRK1-201ENST00000530758 NLRP6P59044 892 aa22.09■■□□□ 1.13
BRK1-201ENST00000530758 ZNF772Q68DY9 489 aaPredicted RBP22.09■■□□□ 1.13
BRK1-201ENST00000530758 NME9Q86XW9 330 aa22.08■■□□□ 1.13
BRK1-201ENST00000530758 KIF20BQ96Q89 1820 aa22.08■■□□□ 1.12
BRK1-201ENST00000530758 SLIT3O75094 1523 aa22.07■■□□□ 1.12
BRK1-201ENST00000530758 ADAMTS2O95450 1211 aa22.07■■□□□ 1.12
BRK1-201ENST00000530758 C8orf37Q96NL8 207 aa22.07■■□□□ 1.12
BRK1-201ENST00000530758 PHRF1Q9P1Y6 1649 aaKnown RBP22.06■■□□□ 1.12
BRK1-201ENST00000530758 OVOS2A0A0J9YW53 1432 aa22.06■■□□□ 1.12
BRK1-201ENST00000530758 OVOS2Q6IE36 1432 aa22.06■■□□□ 1.12
BRK1-201ENST00000530758 CGNL1Q0VF96 1302 aa22.06■■□□□ 1.12
BRK1-201ENST00000530758 NUTM2GQ5VZR2 741 aa22.04■■□□□ 1.12
BRK1-201ENST00000530758 CABLES1Q8TDN4 633 aa22.04■■□□□ 1.12
BRK1-201ENST00000530758 ZRANB1Q9UGI0 708 aa22.03■■□□□ 1.12
BRK1-201ENST00000530758 KNSTRNQ9Y448 316 aa22.03■■□□□ 1.12
BRK1-201ENST00000530758 NSD2O96028 1365 aa22.02■■□□□ 1.12
BRK1-201ENST00000530758 GCP02774 474 aa22.02■■□□□ 1.12
BRK1-201ENST00000530758 AMER1Q5JTC6 1135 aaPredicted RBP22.02■■□□□ 1.12
BRK1-201ENST00000530758 ANKRD26Q9UPS8 1709 aa22.02■■□□□ 1.12
BRK1-201ENST00000530758 NPC1L1Q9UHC9 1359 aa22.01■■□□□ 1.11
BRK1-201ENST00000530758 KCNH5Q8NCM2 988 aa22.01■■□□□ 1.11
BRK1-201ENST00000530758 COG3Q96JB2 828 aa22.01■■□□□ 1.11
BRK1-201ENST00000530758 NGLY1Q96IV0 654 aa22■■□□□ 1.11
BRK1-201ENST00000530758 CPDO75976 1380 aa21.99■■□□□ 1.11
BRK1-201ENST00000530758 FNBP4Q8N3X1 1017 aaPredicted RBP21.99■■□□□ 1.11
BRK1-201ENST00000530758 GGNBP2Q9H3C7 697 aa21.99■■□□□ 1.11
BRK1-201ENST00000530758 CDK12Q9NYV4 1490 aaPredicted RBP21.98■■□□□ 1.11
BRK1-201ENST00000530758 NFAT5O94916 1531 aa21.98■■□□□ 1.11
BRK1-201ENST00000530758 RXRBP28702 533 aa21.98■■□□□ 1.11
BRK1-201ENST00000530758 BCL9LQ86UU0 1499 aa21.97■■□□□ 1.11
BRK1-201ENST00000530758 DDX10Q13206 875 aaKnown RBP21.97■■□□□ 1.11
BRK1-201ENST00000530758 QTRT2Q9H974 415 aaKnown RBP21.97■■□□□ 1.11
BRK1-201ENST00000530758 HAP1P54257 671 aaPredicted RBP21.96■■□□□ 1.11
BRK1-201ENST00000530758 RGS12O14924 1447 aa21.96■■□□□ 1.11
BRK1-201ENST00000530758 ATRNO75882 1429 aa21.96■■□□□ 1.11
BRK1-201ENST00000530758 ARHGEF25Q86VW2 580 aa21.95■■□□□ 1.1
BRK1-201ENST00000530758 USP21Q9UK80 565 aa21.94■■□□□ 1.1
BRK1-201ENST00000530758 COL14A1Q05707 1796 aaKnown RBP21.94■■□□□ 1.1
BRK1-201ENST00000530758 FAM83GA6ND36 823 aa21.93■■□□□ 1.1
BRK1-201ENST00000530758 SLIT2O94813 1529 aa21.93■■□□□ 1.1
BRK1-201ENST00000530758 COL18A1P39060 1754 aa21.93■■□□□ 1.1
BRK1-201ENST00000530758 KIAA0232Q92628 1395 aa21.93■■□□□ 1.1
BRK1-201ENST00000530758 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.93■■□□□ 1.1
BRK1-201ENST00000530758 AATKQ6ZMQ8 1374 aa21.92■■□□□ 1.1
BRK1-201ENST00000530758 PLEKHG5O94827 1062 aa21.92■■□□□ 1.1
BRK1-201ENST00000530758 ZC3H6P61129 1189 aaKnown RBP21.92■■□□□ 1.1
BRK1-201ENST00000530758 RBM6P78332 1123 aaKnown RBP21.92■■□□□ 1.1
BRK1-201ENST00000530758 LTN1O94822 1766 aa21.92■■□□□ 1.1
BRK1-201ENST00000530758 NWD2Q9ULI1 1742 aa21.92■■□□□ 1.1
BRK1-201ENST00000530758 MAP2P11137 1827 aaKnown RBP21.91■■□□□ 1.1
BRK1-201ENST00000530758 ABCC6O95255 1503 aa21.9■■□□□ 1.1
BRK1-201ENST00000530758 PLCH1Q4KWH8 1693 aa21.9■■□□□ 1.1
BRK1-201ENST00000530758 LMO7Q8WWI1 1683 aa21.9■■□□□ 1.1
BRK1-201ENST00000530758 PRDM11Q9NQV5 511 aa21.89■■□□□ 1.09
BRK1-201ENST00000530758 MORC1Q86VD1 984 aa21.88■■□□□ 1.09
BRK1-201ENST00000530758 TRPC5Q9UL62 973 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms