RNA–Protein interactions for RNA: ENST00000530513.5

PACSIN3-207, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-207ENST00000530513 HRCP23327 699 aa32.73■■■□□ 2.83
PACSIN3-207ENST00000530513 STAC3Q96MF2 364 aa32.73■■■□□ 2.83
PACSIN3-207ENST00000530513 ZRANB1Q9UGI0 708 aa32.71■■■□□ 2.83
PACSIN3-207ENST00000530513 ONECUT3O60422 494 aaPredicted RBP32.68■■■□□ 2.82
PACSIN3-207ENST00000530513 NGDNQ8NEJ9 315 aaKnown RBP32.67■■■□□ 2.82
PACSIN3-207ENST00000530513 BTG4Q9NY30 223 aa32.66■■■□□ 2.82
PACSIN3-207ENST00000530513 THSD7AQ9UPZ6 1657 aa32.63■■■□□ 2.81
PACSIN3-207ENST00000530513 PAK3O75914 559 aaPredicted RBP32.63■■■□□ 2.81
PACSIN3-207ENST00000530513 KRT27Q7Z3Y8 459 aa32.63■■■□□ 2.81
PACSIN3-207ENST00000530513 DEFB132Q7Z7B7 95 aa32.63■■■□□ 2.81
PACSIN3-207ENST00000530513 NUDT16Q96DE0 195 aaKnown RBP32.62■■■□□ 2.81
PACSIN3-207ENST00000530513 FAM98CQ17RN3 349 aaKnown RBP32.61■■■□□ 2.81
PACSIN3-207ENST00000530513 A0A0G2JS52 829 aa32.6■■■□□ 2.81
PACSIN3-207ENST00000530513 MYT1Q01538 1121 aa32.6■■■□□ 2.81
PACSIN3-207ENST00000530513 RGPD1P0DJD0 1748 aa32.58■■■□□ 2.81
PACSIN3-207ENST00000530513 SF3B2Q13435 895 aaKnown RBP32.56■■■□□ 2.8
PACSIN3-207ENST00000530513 CDK19Q9BWU1 502 aa32.56■■■□□ 2.8
PACSIN3-207ENST00000530513 NRKQ7Z2Y5 1582 aa32.56■■■□□ 2.8
PACSIN3-207ENST00000530513 POLR3AO14802 1390 aaPredicted RBP32.56■■■□□ 2.8
PACSIN3-207ENST00000530513 PRDM11Q9NQV5 511 aa32.55■■■□□ 2.8
PACSIN3-207ENST00000530513 QRICH2Q9H0J4 1663 aa32.55■■■□□ 2.8
PACSIN3-207ENST00000530513 SPATA31A5Q5VU36 1347 aa32.54■■■□□ 2.8
PACSIN3-207ENST00000530513 SPATA31A7Q8IWB4 1347 aa32.54■■■□□ 2.8
PACSIN3-207ENST00000530513 KIAA0232Q92628 1395 aa32.54■■■□□ 2.8
PACSIN3-207ENST00000530513 TNS1Q9HBL0 1735 aaKnown RBP32.54■■■□□ 2.8
PACSIN3-207ENST00000530513 NBPF1Q3BBV0 1214 aa32.5■■■□□ 2.79
PACSIN3-207ENST00000530513 ACEP12821 1306 aa32.5■■■□□ 2.79
PACSIN3-207ENST00000530513 NUTM2GQ5VZR2 741 aa32.48■■■□□ 2.79
PACSIN3-207ENST00000530513 CHRNA2Q15822 529 aa32.47■■■□□ 2.79
PACSIN3-207ENST00000530513 LMO7Q8WWI1 1683 aa32.46■■■□□ 2.79
PACSIN3-207ENST00000530513 CCDC61Q9Y6R9 512 aa32.46■■■□□ 2.79
PACSIN3-207ENST00000530513 LRP5O75197 1615 aa32.46■■■□□ 2.79
PACSIN3-207ENST00000530513 FAM182BQ5T319 152 aa32.45■■■□□ 2.79
PACSIN3-207ENST00000530513 NBPF8Q3BBV2 869 aa32.44■■■□□ 2.78
PACSIN3-207ENST00000530513 PLEKHG3A1L390 1219 aa32.43■■■□□ 2.78
PACSIN3-207ENST00000530513 ZC3H6P61129 1189 aaKnown RBP32.43■■■□□ 2.78
PACSIN3-207ENST00000530513 SPATA31A1Q5TZJ5 1347 aa32.43■■■□□ 2.78
PACSIN3-207ENST00000530513 PPIP5K1Q6PFW1 1433 aa32.43■■■□□ 2.78
PACSIN3-207ENST00000530513 BAG6P46379 1132 aa32.41■■■□□ 2.78
PACSIN3-207ENST00000530513 TRPM1Q7Z4N2 1603 aa32.4■■■□□ 2.78
PACSIN3-207ENST00000530513 CAMTA1Q9Y6Y1 1673 aa32.4■■■□□ 2.78
PACSIN3-207ENST00000530513 STRN4Q9NRL3 753 aa32.4■■■□□ 2.78
PACSIN3-207ENST00000530513 CENPJQ9HC77 1338 aaPredicted RBP32.4■■■□□ 2.78
PACSIN3-207ENST00000530513 SSH2Q76I76 1423 aa32.39■■■□□ 2.78
PACSIN3-207ENST00000530513 USP19O94966 1318 aa32.37■■■□□ 2.77
PACSIN3-207ENST00000530513 SRPK2P78362 688 aaKnown RBP32.36■■■□□ 2.77
PACSIN3-207ENST00000530513 DISP2A7MBM2 1401 aa32.35■■■□□ 2.77
PACSIN3-207ENST00000530513 ABTB2Q8N961 1025 aa32.35■■■□□ 2.77
PACSIN3-207ENST00000530513 CPDO75976 1380 aa32.34■■■□□ 2.77
PACSIN3-207ENST00000530513 CABP2Q9NPB3 220 aa32.34■■■□□ 2.77
PACSIN3-207ENST00000530513 EN1Q05925 392 aaPredicted RBP32.33■■■□□ 2.77
PACSIN3-207ENST00000530513 PSDA5PKW4 1024 aaPredicted RBP32.32■■■□□ 2.76
PACSIN3-207ENST00000530513 PIK3C2AO00443 1686 aa32.31■■■□□ 2.76
PACSIN3-207ENST00000530513 USP35Q9P2H5 1018 aa32.31■■■□□ 2.76
PACSIN3-207ENST00000530513 PARP4Q9UKK3 1724 aaKnown RBP32.29■■■□□ 2.76
PACSIN3-207ENST00000530513 USP6P35125 1406 aa32.29■■■□□ 2.76
PACSIN3-207ENST00000530513 SLIT3O75094 1523 aa32.28■■■□□ 2.76
PACSIN3-207ENST00000530513 L3MBTL2Q969R5 705 aa32.28■■■□□ 2.76
PACSIN3-207ENST00000530513 COL5A2P05997 1499 aaPredicted RBP32.28■■■□□ 2.76
PACSIN3-207ENST00000530513 RREB1Q92766 1687 aa32.27■■■□□ 2.76
PACSIN3-207ENST00000530513 LARP1Q6PKG0 1096 aaKnown RBP32.27■■■□□ 2.76
PACSIN3-207ENST00000530513 EVA1CP58658 441 aa32.26■■■□□ 2.75
PACSIN3-207ENST00000530513 AKAP12Q02952 1782 aa32.26■■■□□ 2.75
PACSIN3-207ENST00000530513 BARGINQ6ZT62 677 aa32.25■■■□□ 2.75
PACSIN3-207ENST00000530513 BRD4O60885 1362 aaPredicted RBP32.24■■■□□ 2.75
PACSIN3-207ENST00000530513 NLRP13Q86W25 1043 aa32.24■■■□□ 2.75
PACSIN3-207ENST00000530513 WNK3Q9BYP7 1800 aa32.23■■■□□ 2.75
PACSIN3-207ENST00000530513 GCP02774 474 aa32.23■■■□□ 2.75
PACSIN3-207ENST00000530513 NUP188Q5SRE5 1749 aa32.23■■■□□ 2.75
PACSIN3-207ENST00000530513 TRIM37O94972 964 aa32.22■■■□□ 2.75
PACSIN3-207ENST00000530513 FAM196AQ6ZSG2 479 aa32.22■■■□□ 2.75
PACSIN3-207ENST00000530513 CABP1Q9NZU7 370 aa32.22■■■□□ 2.75
PACSIN3-207ENST00000530513 COL18A1P39060 1754 aa32.22■■■□□ 2.75
PACSIN3-207ENST00000530513 EZH2Q15910 746 aaKnown RBP32.21■■■□□ 2.75
PACSIN3-207ENST00000530513 LRRC37A3O60309 1634 aa32.2■■■□□ 2.75
PACSIN3-207ENST00000530513 SIN3AQ96ST3 1273 aa32.2■■■□□ 2.75
PACSIN3-207ENST00000530513 TCP11L2Q8N4U5 519 aa32.19■■■□□ 2.74
PACSIN3-207ENST00000530513 R3HDM1Q15032 1099 aaKnown RBP32.17■■■□□ 2.74
PACSIN3-207ENST00000530513 PEAK1Q9H792 1746 aa32.17■■■□□ 2.74
PACSIN3-207ENST00000530513 CAMKK2Q96RR4 588 aa32.16■■■□□ 2.74
PACSIN3-207ENST00000530513 RGPD5Q99666 1765 aa32.16■■■□□ 2.74
PACSIN3-207ENST00000530513 ROCK2O75116 1388 aaKnown RBP32.16■■■□□ 2.74
PACSIN3-207ENST00000530513 CRB1P82279 1406 aa32.16■■■□□ 2.74
PACSIN3-207ENST00000530513 PDE3BQ13370 1112 aa32.15■■■□□ 2.74
PACSIN3-207ENST00000530513 EVC2Q86UK5 1308 aa32.15■■■□□ 2.74
PACSIN3-207ENST00000530513 ZBTB7CA1YPR0 619 aa32.14■■■□□ 2.74
PACSIN3-207ENST00000530513 NLRP6P59044 892 aa32.14■■■□□ 2.74
PACSIN3-207ENST00000530513 SBF2Q86WG5 1849 aa32.13■■■□□ 2.73
PACSIN3-207ENST00000530513 PARD3Q8TEW0 1356 aa32.13■■■□□ 2.73
PACSIN3-207ENST00000530513 THRAP3Q9Y2W1 955 aaKnown RBP32.13■■■□□ 2.73
PACSIN3-207ENST00000530513 MON2Q7Z3U7 1717 aa32.12■■■□□ 2.73
PACSIN3-207ENST00000530513 AATKQ6ZMQ8 1374 aa32.12■■■□□ 2.73
PACSIN3-207ENST00000530513 APBA3O96018 575 aa32.12■■■□□ 2.73
PACSIN3-207ENST00000530513 NEUROD1Q13562 356 aa32.1■■■□□ 2.73
PACSIN3-207ENST00000530513 CPSF1Q10570 1443 aaKnown RBP32.09■■■□□ 2.73
PACSIN3-207ENST00000530513 RGPD3A6NKT7 1758 aaPredicted RBP32.07■■■□□ 2.72
PACSIN3-207ENST00000530513 RGPD4Q7Z3J3 1758 aa32.07■■■□□ 2.72
PACSIN3-207ENST00000530513 NFAT5O94916 1531 aa32.05■■■□□ 2.72
PACSIN3-207ENST00000530513 OVOS2A0A0G2JMS6 1433 aa32.04■■■□□ 2.72
PACSIN3-207ENST00000530513 OVOS2A0A0J9YW53 1432 aa32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms