RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 G3V3G9 751 aa9.14□□□□□ -0.95
CTNND1-223ENST00000529986 DCAF8Q5TAQ9 597 aa9.14□□□□□ -0.95
CTNND1-223ENST00000529986 ZMYND15Q9H091 742 aa9.14□□□□□ -0.95
CTNND1-223ENST00000529986 POLA1P09884 1462 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-223ENST00000529986 COG3Q96JB2 828 aa9.14□□□□□ -0.95
CTNND1-223ENST00000529986 PEG3Q9GZU2 1588 aa9.13□□□□□ -0.95
CTNND1-223ENST00000529986 IBSPP21815 317 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-223ENST00000529986 FAM193AP78312 1265 aa9.13□□□□□ -0.95
CTNND1-223ENST00000529986 TEFQ10587 303 aa9.13□□□□□ -0.95
CTNND1-223ENST00000529986 MINK1Q8N4C8 1332 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-223ENST00000529986 CUL7Q14999 1698 aa9.13□□□□□ -0.95
CTNND1-223ENST00000529986 XPCQ01831 940 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-223ENST00000529986 NEXNQ0ZGT2 675 aa9.13□□□□□ -0.95
CTNND1-223ENST00000529986 STK11IPQ8N1F8 1099 aa9.13□□□□□ -0.95
CTNND1-223ENST00000529986 RABEP1Q15276 862 aa9.12□□□□□ -0.95
CTNND1-223ENST00000529986 SAFBQ15424 915 aaKnown RBP eCLIP9.12□□□□□ -0.95
CTNND1-223ENST00000529986 NESP48681 1621 aa9.12□□□□□ -0.95
CTNND1-223ENST00000529986 K7ELQ4 463 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-223ENST00000529986 OFD1O75665 1012 aa9.12□□□□□ -0.95
CTNND1-223ENST00000529986 ZSCAN30Q86W11 494 aa9.12□□□□□ -0.95
CTNND1-223ENST00000529986 CGNQ9P2M7 1197 aaKnown RBP9.12□□□□□ -0.95
CTNND1-223ENST00000529986 CCDC192P0DO97 292 aa9.12□□□□□ -0.95
CTNND1-223ENST00000529986 CT47A1Q5JQC4 288 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-223ENST00000529986 CENPHQ9H3R5 247 aa9.12□□□□□ -0.95
CTNND1-223ENST00000529986 C11orf95C9JLR9 678 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-223ENST00000529986 CCDC184Q52MB2 194 aa9.12□□□□□ -0.95
CTNND1-223ENST00000529986 OSCARQ8IYS5 282 aa9.12□□□□□ -0.95
CTNND1-223ENST00000529986 NEUROD6Q96NK8 337 aa9.12□□□□□ -0.95
CTNND1-223ENST00000529986 ERC2O15083 957 aa9.11□□□□□ -0.95
CTNND1-223ENST00000529986 KIAA0754O94854 1291 aa9.11□□□□□ -0.95
CTNND1-223ENST00000529986 SERPINC1P01008 464 aa9.11□□□□□ -0.95
CTNND1-223ENST00000529986 STK3Q13188 491 aa9.11□□□□□ -0.95
CTNND1-223ENST00000529986 TNMDQ9H2S6 317 aa9.11□□□□□ -0.95
CTNND1-223ENST00000529986 ROCK1Q13464 1354 aa9.11□□□□□ -0.95
CTNND1-223ENST00000529986 SYCE3A1L190 88 aa9.11□□□□□ -0.95
CTNND1-223ENST00000529986 HSP90AB2PQ58FF8 381 aa9.11□□□□□ -0.95
CTNND1-223ENST00000529986 FILIP1Q7Z7B0 1213 aa9.11□□□□□ -0.95
CTNND1-223ENST00000529986 MIA2Q96PC5 1412 aa9.11□□□□□ -0.95
CTNND1-223ENST00000529986 UNC13AQ9UPW8 1703 aa9.11□□□□□ -0.95
CTNND1-223ENST00000529986 WASHC4Q2M389 1173 aa9.11□□□□□ -0.95
CTNND1-223ENST00000529986 C1orf141Q5JVX7 400 aa9.11□□□□□ -0.95
CTNND1-223ENST00000529986 LRRFIP1Q32MZ4 808 aaKnown RBP9.11□□□□□ -0.95
CTNND1-223ENST00000529986 RALYLQ86SE5 291 aaKnown RBP9.11□□□□□ -0.95
CTNND1-223ENST00000529986 MTMR7Q9Y216 660 aa9.11□□□□□ -0.95
CTNND1-223ENST00000529986 ANKRD50Q9ULJ7 1429 aa9.11□□□□□ -0.95
CTNND1-223ENST00000529986 UBE2Q2Q8WVN8 375 aa9.1□□□□□ -0.95
CTNND1-223ENST00000529986 ZFYVE27Q5T4F4 411 aa9.1□□□□□ -0.95
CTNND1-223ENST00000529986 TSPYL4Q9UJ04 414 aa9.1□□□□□ -0.95
CTNND1-223ENST00000529986 SYNJ2O15056 1496 aa9.1□□□□□ -0.95
CTNND1-223ENST00000529986 ERICH2A1L162 156 aa9.1□□□□□ -0.95
CTNND1-223ENST00000529986 DCAF8L1A6NGE4 600 aa9.1□□□□□ -0.95
CTNND1-223ENST00000529986 CCDC102AQ96A19 550 aa9.1□□□□□ -0.95
CTNND1-223ENST00000529986 FSD1Q9BTV5 496 aa9.1□□□□□ -0.95
CTNND1-223ENST00000529986 TRIM34Q9BYJ4 488 aa9.1□□□□□ -0.95
CTNND1-223ENST00000529986 EVC2Q86UK5 1308 aa9.1□□□□□ -0.95
CTNND1-223ENST00000529986 BIVM-ERCC5R4GMW8 1640 aa9.1□□□□□ -0.95
CTNND1-223ENST00000529986 EXOSC9Q06265 439 aaKnown RBP9.1□□□□□ -0.95
CTNND1-223ENST00000529986 DEF6Q9H4E7 631 aa9.1□□□□□ -0.95
CTNND1-223ENST00000529986 CCP110O43303 1012 aa9.09□□□□□ -0.95
CTNND1-223ENST00000529986 GNAI1P63096 354 aa9.09□□□□□ -0.95
CTNND1-223ENST00000529986 TCP11L2Q8N4U5 519 aa9.09□□□□□ -0.95
CTNND1-223ENST00000529986 ABCA10Q8WWZ4 1543 aa9.09□□□□□ -0.95
CTNND1-223ENST00000529986 MAP4K4O95819 1239 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-223ENST00000529986 PSMA5P28066 241 aa9.09□□□□□ -0.95
CTNND1-223ENST00000529986 AIMP1Q12904 312 aaKnown RBP9.09□□□□□ -0.95
CTNND1-223ENST00000529986 STAC3Q96MF2 364 aa9.09□□□□□ -0.95
CTNND1-223ENST00000529986 FYB1O15117 783 aa9.09□□□□□ -0.95
CTNND1-223ENST00000529986 EPS15P42566 896 aa9.09□□□□□ -0.95
CTNND1-223ENST00000529986 CNTROBQ8N137 903 aa9.09□□□□□ -0.95
CTNND1-223ENST00000529986 TSR2Q969E8 191 aaKnown RBP9.09□□□□□ -0.95
CTNND1-223ENST00000529986 LAMC3Q9Y6N6 1575 aa9.09□□□□□ -0.95
CTNND1-223ENST00000529986 ARHGAP5Q13017 1502 aa9.09□□□□□ -0.95
CTNND1-223ENST00000529986 STK38Q15208 465 aa9.09□□□□□ -0.95
CTNND1-223ENST00000529986 GGNBP2Q9H3C7 697 aa9.09□□□□□ -0.95
CTNND1-223ENST00000529986 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.08□□□□□ -0.96
CTNND1-223ENST00000529986 SURF6O75683 361 aaKnown RBP9.08□□□□□ -0.96
CTNND1-223ENST00000529986 SMARCE1Q969G3 411 aa9.08□□□□□ -0.96
CTNND1-223ENST00000529986 NOB1Q9ULX3 412 aaKnown RBP9.08□□□□□ -0.96
CTNND1-223ENST00000529986 ZNF644Q9H582 1327 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-223ENST00000529986 SPDYE4A6NLX3 237 aa9.08□□□□□ -0.96
CTNND1-223ENST00000529986 UBTFL1P0CB47 393 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-223ENST00000529986 ZNF428Q96B54 188 aa9.08□□□□□ -0.96
CTNND1-223ENST00000529986 TCEAL9Q9UHQ7 104 aa9.08□□□□□ -0.96
CTNND1-223ENST00000529986 RBM25P49756 843 aaKnown RBP9.08□□□□□ -0.96
CTNND1-223ENST00000529986 BRD4O60885 1362 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-223ENST00000529986 AAMPQ13685 434 aa9.08□□□□□ -0.96
CTNND1-223ENST00000529986 FILIP1LQ4L180 1135 aa9.08□□□□□ -0.96
CTNND1-223ENST00000529986 CWC22Q9HCG8 908 aaKnown RBP9.08□□□□□ -0.96
CTNND1-223ENST00000529986 HFM1A2PYH4 1435 aa9.08□□□□□ -0.96
CTNND1-223ENST00000529986 ODF2Q5BJF6 829 aa9.08□□□□□ -0.96
CTNND1-223ENST00000529986 MCM2P49736 904 aa9.07□□□□□ -0.96
CTNND1-223ENST00000529986 SAMD1Q6SPF0 538 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-223ENST00000529986 PDCL3Q9H2J4 239 aa9.07□□□□□ -0.96
CTNND1-223ENST00000529986 ME1P48163 572 aa9.07□□□□□ -0.96
CTNND1-223ENST00000529986 DNAJC2Q99543 621 aaKnown RBP9.07□□□□□ -0.96
CTNND1-223ENST00000529986 PCF11O94913 1555 aaKnown RBP9.07□□□□□ -0.96
CTNND1-223ENST00000529986 VGFO15240 615 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-223ENST00000529986 POLR3GO15318 223 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-223ENST00000529986 CAMK4Q16566 473 aa9.07□□□□□ -0.96
CTNND1-223ENST00000529986 HSP90AB4PQ58FF6 505 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms